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The map label for this gene is dcuD [C]

Identifier: 51892826

GI number: 51892826

Start: 1834270

End: 1835526

Strand: Reverse

Name: dcuD [C]

Synonym: STH1688

Alternate gene names: 51892826

Gene position: 1835526-1834270 (Counterclockwise)

Preceding gene: 51892827

Following gene: 51892815

Centisome position: 51.47

GC content: 69.53

Gene sequence:

>1257_bases
ATGTTGCCGTGGGTTGGCGTGCTCATCGTCATCCTCACCGTCTACGCGATCCTGAAGCGGTACGAGACCCGCCTGGTGCT
GTTCACCGCCGGCCTGCTGATGGCGCTCATCGCCCTGAAGCCGATGGAGGCCTTCAGCCAGTTCCAGAAGTCGATGACCA
ACGCCGGCCTGATCAGCGCCATCTGCTCGGTCATGGGATTCGCCTACGTGATGAAGCTGACCCAGTGCGACCAGCACCTG
GTCCACGCGGTCGCCAACACCGTCGCGCGGGCGCGGGCGATCCTGATCCCGGCGACCACCATCGCCACCTTCCTGATCAA
CATCGCCCTGCCCAGCGCGGCGGGCTGCGCCGCCGCCGTGGGGGCGGTGATGATCCCGGTCCTGATGGCCGCCGGCGTCC
ACCCGGCGGTGGCCGCGGCCGCCGTGCTCGCGGGCACCTTCGGCTCCGTGCTCAGCCCCGGCAGCTCCCACATCGTGATG
GTCGCCGAGATGTCCGGCGCCTCGGTGGTGGACACCATCGCCACGGTCACGCCGGCGACGGTGGTCACCGGCCTGATCGG
CGCCGGCGTCCTGACCATCCTGGCGTTCCTCCGCCGGGAGGACCGCGGGCACGCCTCTGAGACCGTGACCGAATCCCCGC
AATTCCGGCCCAACCCCCTTTATGCCCTGGTCCCGATCGTTCCCCTGGTGCTGCTGGTGCTGGGCGCGACGGTGCCGGCG
ATGAAGAACTGGAGGCTCACCGTGCCCGCGTGCATGCTCATCGGCACCATTCTCGCCCTGCTCGTGACCCGTATGAACCC
CGCCGAGGTGACCAAGTCCTTCTTCGACGGCATGGGCAAGGCGTACGGCGACGTCATCGGCATCATCATCGCCGCGGGCG
TGTTCGCCGCGGGGCTGACCCAGGTGGGCCTCATCGACCTGCTGTTGAACGCGGCCACCGGGGCCAGGGGCGCGATCGGG
GCCGCGGGGACGTGGGGCCCCTTCCTGGTGGCCATCCTCAGCGGATCCGGTGACGCCGCCACCATAGCCTTCAACGAGGC
CGTCACCCCCCATGCCGCCAGCTTCGGCCTGACCATCCCCAAGCTGGGGACGCTGGCCTCCCTGGCCGGCTCCCTTGGCC
GCTCCATGAGTCCCGTCGCGGGCGCGGCCATCATCGTCTCCGGCATCGCGGGCGTGAGCCCGATAGAGGTGGCGAAGCGC
AACGCCCCCGGCATGATCCTGGCCAGCGTCGTCGCGTTCCTCATGCAGGGGCTCTGA

Upstream 100 bases:

>100_bases
GCCTCGGCCTGAGGGAGGGGAACCGTGACACAGGCGTGGGGGCCGGTCGCGCCGGGACGATGATCTGTGCAGGAGACGCA
GCAAGGGGGAGTGTTCGCAC

Downstream 100 bases:

>100_bases
CCAGCCCGCGGGTTCCAGCAGGGGCGCACGAAGAAGGGCCGACCGGTGGCTCCCGGTCGGCCCGCGGCCTTTCTGCCGGA
GGTTTACCGCACGTAGAACG

Product: C4-dicarboxylate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MLPWVGVLIVILTVYAILKRYETRLVLFTAGLLMALIALKPMEAFSQFQKSMTNAGLISAICSVMGFAYVMKLTQCDQHL
VHAVANTVARARAILIPATTIATFLINIALPSAAGCAAAVGAVMIPVLMAAGVHPAVAAAAVLAGTFGSVLSPGSSHIVM
VAEMSGASVVDTIATVTPATVVTGLIGAGVLTILAFLRREDRGHASETVTESPQFRPNPLYALVPIVPLVLLVLGATVPA
MKNWRLTVPACMLIGTILALLVTRMNPAEVTKSFFDGMGKAYGDVIGIIIAAGVFAAGLTQVGLIDLLLNAATGARGAIG
AAGTWGPFLVAILSGSGDAATIAFNEAVTPHAASFGLTIPKLGTLASLAGSLGRSMSPVAGAAIIVSGIAGVSPIEVAKR
NAPGMILASVVAFLMQGL

Sequences:

>Translated_418_residues
MLPWVGVLIVILTVYAILKRYETRLVLFTAGLLMALIALKPMEAFSQFQKSMTNAGLISAICSVMGFAYVMKLTQCDQHL
VHAVANTVARARAILIPATTIATFLINIALPSAAGCAAAVGAVMIPVLMAAGVHPAVAAAAVLAGTFGSVLSPGSSHIVM
VAEMSGASVVDTIATVTPATVVTGLIGAGVLTILAFLRREDRGHASETVTESPQFRPNPLYALVPIVPLVLLVLGATVPA
MKNWRLTVPACMLIGTILALLVTRMNPAEVTKSFFDGMGKAYGDVIGIIIAAGVFAAGLTQVGLIDLLLNAATGARGAIG
AAGTWGPFLVAILSGSGDAATIAFNEAVTPHAASFGLTIPKLGTLASLAGSLGRSMSPVAGAAIIVSGIAGVSPIEVAKR
NAPGMILASVVAFLMQGL
>Mature_418_residues
MLPWVGVLIVILTVYAILKRYETRLVLFTAGLLMALIALKPMEAFSQFQKSMTNAGLISAICSVMGFAYVMKLTQCDQHL
VHAVANTVARARAILIPATTIATFLINIALPSAAGCAAAVGAVMIPVLMAAGVHPAVAAAAVLAGTFGSVLSPGSSHIVM
VAEMSGASVVDTIATVTPATVVTGLIGAGVLTILAFLRREDRGHASETVTESPQFRPNPLYALVPIVPLVLLVLGATVPA
MKNWRLTVPACMLIGTILALLVTRMNPAEVTKSFFDGMGKAYGDVIGIIIAAGVFAAGLTQVGLIDLLLNAATGARGAIG
AAGTWGPFLVAILSGSGDAATIAFNEAVTPHAASFGLTIPKLGTLASLAGSLGRSMSPVAGAAIIVSGIAGVSPIEVAKR
NAPGMILASVVAFLMQGL

Specific function: Cryptic C4-dicarboxylate carrier [C]

COG id: COG3069

COG function: function code C; C4-dicarboxylate transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dcuC/dcuD transporter (TC 2.A.61) family [H]

Homologues:

Organism=Escherichia coli, GI1789622, Length=444, Percent_Identity=25.9009009009009, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786839, Length=322, Percent_Identity=31.6770186335404, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018385
- InterPro:   IPR004669 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 42470; Mature: 42470

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPWVGVLIVILTVYAILKRYETRLVLFTAGLLMALIALKPMEAFSQFQKSMTNAGLISA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHH
ICSVMGFAYVMKLTQCDQHLVHAVANTVARARAILIPATTIATFLINIALPSAAGCAAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHCCCCCHHHHHH
GAVMIPVLMAAGVHPAVAAAAVLAGTFGSVLSPGSSHIVMVAEMSGASVVDTIATVTPAT
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHH
VVTGLIGAGVLTILAFLRREDRGHASETVTESPQFRPNPLYALVPIVPLVLLVLGATVPA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCH
MKNWRLTVPACMLIGTILALLVTRMNPAEVTKSFFDGMGKAYGDVIGIIIAAGVFAAGLT
HCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVGLIDLLLNAATGARGAIGAAGTWGPFLVAILSGSGDAATIAFNEAVTPHAASFGLTIP
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHCCCCCC
KLGTLASLAGSLGRSMSPVAGAAIIVSGIAGVSPIEVAKRNAPGMILASVVAFLMQGL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLPWVGVLIVILTVYAILKRYETRLVLFTAGLLMALIALKPMEAFSQFQKSMTNAGLISA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHH
ICSVMGFAYVMKLTQCDQHLVHAVANTVARARAILIPATTIATFLINIALPSAAGCAAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHCCCCCHHHHHH
GAVMIPVLMAAGVHPAVAAAAVLAGTFGSVLSPGSSHIVMVAEMSGASVVDTIATVTPAT
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHH
VVTGLIGAGVLTILAFLRREDRGHASETVTESPQFRPNPLYALVPIVPLVLLVLGATVPA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCH
MKNWRLTVPACMLIGTILALLVTRMNPAEVTKSFFDGMGKAYGDVIGIIIAAGVFAAGLT
HCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVGLIDLLLNAATGARGAIGAAGTWGPFLVAILSGSGDAATIAFNEAVTPHAASFGLTIP
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHCCCCCC
KLGTLASLAGSLGRSMSPVAGAAIIVSGIAGVSPIEVAKRNAPGMILASVVAFLMQGL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]