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The map label for this gene is yprB [H]

Identifier: 51892760

GI number: 51892760

Start: 1760972

End: 1762285

Strand: Reverse

Name: yprB [H]

Synonym: STH1622

Alternate gene names: 51892760

Gene position: 1762285-1760972 (Counterclockwise)

Preceding gene: 51892761

Following gene: 51892759

Centisome position: 49.42

GC content: 73.29

Gene sequence:

>1314_bases
GTGCGCGAGCGGCTGCGGCTGCTGAAGGCGGCCGGGGCCGCCCGGGCCGCCGCGGAAAGGGCGGCCTCTCCGGCGGCTCC
CGCGTCACAGGCGAGCTCCGGTGACCCCACCCGGGCCCCGGCCGGGGCGCCCTCCGCCCTCCAGCCGGCTTCGCTCTGCC
CCGGGCTGGAGGGCCACCTGGTGGCCACGGAAGCCGGGCCTGCGTTCCGGCTGGAACGGCGCTATCCCCTGGATTTCCGC
CGGGGGCCGCTGCCCCTGGGATGGCCGCTGCAGCTGCCCGCCACGGTCTGGCCGCTGGTGGGGCGGGTGCCGCCTGCCTT
CGACCCGCGGCGCGCCGCCTTCGTCGACACCGAGACCACGGGGCTGGCCGGCGGCACCGGCACCTACGCCTTCCTGGTCG
GGGTGGGCTTCTACCAGGGGGACGAGTTCGTCGTGCGGCAGTACTTCCTGCGGGACTTCCCCGAGGAGGAGGCCATGCTC
GCCGCCATCGCCGCCGACCTCGCGCCGTGCACGTGCCTGGTCTCCTTCAACGGCAAGTCCTTTGACTGGCCGCTGCTGGA
GACCCGGTTCCGCCTGGCCCGCCGCAGGCCGCCGCTCGGCGGGGCGCCGCACCTCGACCTGCTCCACCCGGCCCGGCGGC
TCTGGAGCGCCCGGCTCGACGGATGTACGTTGCAGGACCTGGAGCGGGCCATCCTGGGCGTCGTCCGCACAGGGGACGTG
CCGGGTTCCCGCATTCCGGCCCTCTATTTCGATTACCTGCGTTCCGGCGACGCCTCCGCCCTGGTCCAGGTGGTGGAACA
CAACCGGTTGGACATCCTCTCCCTGGCCTCGCTGGCGGGCTGGATGGGCCAGATGGCCGCTGACCCGCTGGGGCCCACGC
CCGACGGCGAACTGCTCTGCGGAGACGACCTCTATCACCTGGGGCGCCTGTTTGAGGCGCGGGGACAGCTGGCCGAGGCC
CTCACGTGTTACGAGGCTGCCCGGCAACGGGGCATCGCGGCGGTCTCCGAGACCGCCCTGCTCCGCCGCCTCTCCTTCGC
GTACAAGCGGGCCCGGGCGCACCCGCAGGCGGTGGCCATCTGGGAGCAGATGATCGCCTCCGGCGGTCTGACGCTCTTTC
CGTACATCGAACTGGCCAAGTACCACGAGCACGTCACCCGCCGGTACGATCTGGCGGAGAGCCTGACCGTCCGGGCGCTG
GAGGTGGTCGACCGGCGCCGGTCGCTGGGCGGTGCCGGAGCCCAGCGCGAGTACCAGGAGGTGCAACACCGGCTCCGGCG
GCTTCGCCGCAAGCGCACGGGCCAGTCTTCATAA

Upstream 100 bases:

>100_bases
GGCTGGTCTTTTCCAAGAAACGGCTGCGCCGGTTCCCCGAACCGGGCGAGGTGCAGCAGTTGATCCGGTCCTGATCACAC
GGGAGGAATGCGGAGTGAAC

Downstream 100 bases:

>100_bases
CGCAGGGCCCCCCGGACATACTCTTGTCCGGGGGGTTGTACCATGCTCTTCATCGACCGCGCATGGCTGGTGCGCCGGGC
CGTCGTGGTGGCCACGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MRERLRLLKAAGAARAAAERAASPAAPASQASSGDPTRAPAGAPSALQPASLCPGLEGHLVATEAGPAFRLERRYPLDFR
RGPLPLGWPLQLPATVWPLVGRVPPAFDPRRAAFVDTETTGLAGGTGTYAFLVGVGFYQGDEFVVRQYFLRDFPEEEAML
AAIAADLAPCTCLVSFNGKSFDWPLLETRFRLARRRPPLGGAPHLDLLHPARRLWSARLDGCTLQDLERAILGVVRTGDV
PGSRIPALYFDYLRSGDASALVQVVEHNRLDILSLASLAGWMGQMAADPLGPTPDGELLCGDDLYHLGRLFEARGQLAEA
LTCYEAARQRGIAAVSETALLRRLSFAYKRARAHPQAVAIWEQMIASGGLTLFPYIELAKYHEHVTRRYDLAESLTVRAL
EVVDRRRSLGGAGAQREYQEVQHRLRRLRRKRTGQSS

Sequences:

>Translated_437_residues
MRERLRLLKAAGAARAAAERAASPAAPASQASSGDPTRAPAGAPSALQPASLCPGLEGHLVATEAGPAFRLERRYPLDFR
RGPLPLGWPLQLPATVWPLVGRVPPAFDPRRAAFVDTETTGLAGGTGTYAFLVGVGFYQGDEFVVRQYFLRDFPEEEAML
AAIAADLAPCTCLVSFNGKSFDWPLLETRFRLARRRPPLGGAPHLDLLHPARRLWSARLDGCTLQDLERAILGVVRTGDV
PGSRIPALYFDYLRSGDASALVQVVEHNRLDILSLASLAGWMGQMAADPLGPTPDGELLCGDDLYHLGRLFEARGQLAEA
LTCYEAARQRGIAAVSETALLRRLSFAYKRARAHPQAVAIWEQMIASGGLTLFPYIELAKYHEHVTRRYDLAESLTVRAL
EVVDRRRSLGGAGAQREYQEVQHRLRRLRRKRTGQSS
>Mature_437_residues
MRERLRLLKAAGAARAAAERAASPAAPASQASSGDPTRAPAGAPSALQPASLCPGLEGHLVATEAGPAFRLERRYPLDFR
RGPLPLGWPLQLPATVWPLVGRVPPAFDPRRAAFVDTETTGLAGGTGTYAFLVGVGFYQGDEFVVRQYFLRDFPEEEAML
AAIAADLAPCTCLVSFNGKSFDWPLLETRFRLARRRPPLGGAPHLDLLHPARRLWSARLDGCTLQDLERAILGVVRTGDV
PGSRIPALYFDYLRSGDASALVQVVEHNRLDILSLASLAGWMGQMAADPLGPTPDGELLCGDDLYHLGRLFEARGQLAEA
LTCYEAARQRGIAAVSETALLRRLSFAYKRARAHPQAVAIWEQMIASGGLTLFPYIELAKYHEHVTRRYDLAESLTVRAL
EVVDRRRSLGGAGAQREYQEVQHRLRRLRRKRTGQSS

Specific function: Unknown

COG id: COG3359

COG function: function code L; Predicted exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47833; Mature: 47833

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERLRLLKAAGAARAAAERAASPAAPASQASSGDPTRAPAGAPSALQPASLCPGLEGHL
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCE
VATEAGPAFRLERRYPLDFRRGPLPLGWPLQLPATVWPLVGRVPPAFDPRRAAFVDTETT
EEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCCC
GLAGGTGTYAFLVGVGFYQGDEFVVRQYFLRDFPEEEAMLAAIAADLAPCTCLVSFNGKS
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEEECCCC
FDWPLLETRFRLARRRPPLGGAPHLDLLHPARRLWSARLDGCTLQDLERAILGVVRTGDV
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PGSRIPALYFDYLRSGDASALVQVVEHNRLDILSLASLAGWMGQMAADPLGPTPDGELLC
CCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
GDDLYHLGRLFEARGQLAEALTCYEAARQRGIAAVSETALLRRLSFAYKRARAHPQAVAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
WEQMIASGGLTLFPYIELAKYHEHVTRRYDLAESLTVRALEVVDRRRSLGGAGAQREYQE
HHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VQHRLRRLRRKRTGQSS
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRERLRLLKAAGAARAAAERAASPAAPASQASSGDPTRAPAGAPSALQPASLCPGLEGHL
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCE
VATEAGPAFRLERRYPLDFRRGPLPLGWPLQLPATVWPLVGRVPPAFDPRRAAFVDTETT
EEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCCC
GLAGGTGTYAFLVGVGFYQGDEFVVRQYFLRDFPEEEAMLAAIAADLAPCTCLVSFNGKS
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEEECCCC
FDWPLLETRFRLARRRPPLGGAPHLDLLHPARRLWSARLDGCTLQDLERAILGVVRTGDV
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PGSRIPALYFDYLRSGDASALVQVVEHNRLDILSLASLAGWMGQMAADPLGPTPDGELLC
CCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
GDDLYHLGRLFEARGQLAEALTCYEAARQRGIAAVSETALLRRLSFAYKRARAHPQAVAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH
WEQMIASGGLTLFPYIELAKYHEHVTRRYDLAESLTVRALEVVDRRRSLGGAGAQREYQE
HHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VQHRLRRLRRKRTGQSS
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 3145906 [H]