| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is nudG [C]
Identifier: 51892519
GI number: 51892519
Start: 1528825
End: 1529580
Strand: Reverse
Name: nudG [C]
Synonym: STH1381
Alternate gene names: 51892519
Gene position: 1529580-1528825 (Counterclockwise)
Preceding gene: 51892529
Following gene: 51892516
Centisome position: 42.89
GC content: 68.78
Gene sequence:
>756_bases ATGGTTCACCTGCGGGAGACCTACCGGGCAAAACCGGGAAGGACCGACGCGCTGGCCCGGGTGCTGTCGGATCGACTCAT CCCCGCTTGTGTGAAGCACGGGGCCGCGCTGATCGGATGGTGGGTCGCCCCGGCGGATGGAGAGATGGTGATCATCTGGG ACTGTCCCCAGCTTGCCGAGCACCGGCGGATCATCGCAGAGGCGCGCCGGGATCCGCTGTGGCCGGAGGATGGCTGGACG GACGAACTGGTGGAAACGCGCCGGGAAGAGCTGCTGGAGCCCATGGATCGGTACGGCCCGCCACGCCACACCCTGGCGGT CTCCGGCTTCATCGCCGATGGCGAAGGACGGGTTCTGCTGGTTCGTACCCGCCTGCGCAGCGACACCTGGGAGCTGCCCG GGGGGCAGGTGGAGGCGGGTGAGGACCCGGTGACCGCCCTGGTGCGGGAGATCCGGGAGGAGACCGGGATTGAGGCCGAG ATCCAGGGCCTGACCGGGGTGTATTACTCCACCGCCCGGGGCAGGGTCTGCAACCTGGTTTTCCGGGGCGTCGCGGTAGG CGGACGGCTGTCCTCCTCTCCGGAGACCTTGGAAGCGGCCTTCGTCCAACTCCGTGCAGACACCGTAAGCCAGTGGGTAA CCCGCCCCCACTTCCAGGTGCGGGTGACCGACGCCCTGGGCGCCCACACCTTGCCCTACGAAACGTACAGGCTGCGGCCC TACGCCCGGCTGCTGCGGCTCAGCGGCCAGCACTGA
Upstream 100 bases:
>100_bases CGCCCAGGAGACCCGGCGTACCTGCTGCGGGAGCAGTGTGCGACTTGCCAGCCGCCCGGGACGTCCGATTGCGTAGATTT GGGGATGGAGGTATGCGACG
Downstream 100 bases:
>100_bases CGGGTGTGACCGCCGCCAATTACCGGCGCCGGCTGGAGTACCGTGCGGAACGGGTGCGGGCCGCCTGGACCCAGTTGCCG CGGGGCGGCTTCCCGCCCCC
Product: hypothetical protein
Products: CMP; diphosphate [C]
Alternate protein names: ORF154 [H]
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MVHLRETYRAKPGRTDALARVLSDRLIPACVKHGAALIGWWVAPADGEMVIIWDCPQLAEHRRIIAEARRDPLWPEDGWT DELVETRREELLEPMDRYGPPRHTLAVSGFIADGEGRVLLVRTRLRSDTWELPGGQVEAGEDPVTALVREIREETGIEAE IQGLTGVYYSTARGRVCNLVFRGVAVGGRLSSSPETLEAAFVQLRADTVSQWVTRPHFQVRVTDALGAHTLPYETYRLRP YARLLRLSGQH
Sequences:
>Translated_251_residues MVHLRETYRAKPGRTDALARVLSDRLIPACVKHGAALIGWWVAPADGEMVIIWDCPQLAEHRRIIAEARRDPLWPEDGWT DELVETRREELLEPMDRYGPPRHTLAVSGFIADGEGRVLLVRTRLRSDTWELPGGQVEAGEDPVTALVREIREETGIEAE IQGLTGVYYSTARGRVCNLVFRGVAVGGRLSSSPETLEAAFVQLRADTVSQWVTRPHFQVRVTDALGAHTLPYETYRLRP YARLLRLSGQH >Mature_251_residues MVHLRETYRAKPGRTDALARVLSDRLIPACVKHGAALIGWWVAPADGEMVIIWDCPQLAEHRRIIAEARRDPLWPEDGWT DELVETRREELLEPMDRYGPPRHTLAVSGFIADGEGRVLLVRTRLRSDTWELPGGQVEAGEDPVTALVREIREETGIEAE IQGLTGVYYSTARGRVCNLVFRGVAVGGRLSSSPETLEAAFVQLRADTVSQWVTRPHFQVRVTDALGAHTLPYETYRLRP YARLLRLSGQH
Specific function: Specific For Pyrimidine Substrates. Acts On 5-Methyl- Dctp, Ctp And Dctp In Decreasing Order. [C]
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.- [C]
Molecular weight: Translated: 28237; Mature: 28237
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHLRETYRAKPGRTDALARVLSDRLIPACVKHGAALIGWWVAPADGEMVIIWDCPQLAE CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCHHHHH HRRIIAEARRDPLWPEDGWTDELVETRREELLEPMDRYGPPRHTLAVSGFIADGEGRVLL HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEE VRTRLRSDTWELPGGQVEAGEDPVTALVREIREETGIEAEIQGLTGVYYSTARGRVCNLV EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCHHHHHH FRGVAVGGRLSSSPETLEAAFVQLRADTVSQWVTRPHFQVRVTDALGAHTLPYETYRLRP HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHCCCH YARLLRLSGQH HHHHHHHCCCC >Mature Secondary Structure MVHLRETYRAKPGRTDALARVLSDRLIPACVKHGAALIGWWVAPADGEMVIIWDCPQLAE CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCHHHHH HRRIIAEARRDPLWPEDGWTDELVETRREELLEPMDRYGPPRHTLAVSGFIADGEGRVLL HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEE VRTRLRSDTWELPGGQVEAGEDPVTALVREIREETGIEAEIQGLTGVYYSTARGRVCNLV EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCHHHHHH FRGVAVGGRLSSSPETLEAAFVQLRADTVSQWVTRPHFQVRVTDALGAHTLPYETYRLRP HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHCCCH YARLLRLSGQH HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CTP; H2O [C]
Specific reaction: CTP + H2O = CMP + diphosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934842 [H]