Click here to switch to the map view.

The map label for this gene is 51892516

Identifier: 51892516

GI number: 51892516

Start: 1524908

End: 1525552

Strand: Reverse

Name: 51892516

Synonym: STH1378

Alternate gene names: NA

Gene position: 1525552-1524908 (Counterclockwise)

Preceding gene: 51892519

Following gene: 51892515

Centisome position: 42.78

GC content: 66.2

Gene sequence:

>645_bases
GTGCCCGAGGAGCGTCTGCAGCCAGCTCAGCTGGAACCCATTTGCATTCGAACCACTCAGGTCTACGACTGGTGCTATCT
GAACGGCACCACAAGCGTGTTGCTTCCCGACATCGTGTTCCCGGCGGACACCTCTGTGGTGGCGGGGATCGAGGCCGCCA
TCATCAGCGTGGAGTGCGCTGAGATCGACCGGGACCAGGATCCGAGCGGTCTGGCCAATGTCACAATCCGGCGGCTGGTC
ACCTTCGAGCTCACCTTCGTCGACGTGAACGGCAACCCCGTTCCGGTCATCGTCAACGGCGTCGAGGTGACCACGCAGAC
CCGGTCCCGCTTCTTCGACGAGTTCATCCGCGTCTGCGCGCCGGACGGCACCACCCTGACGTGCGAGATCACCGATGCGG
CCGCCCGGGCCTTCATGACCGTGATCAACGGCACGCCGGCGGTGCAGGTCGAGCTGTTCATCTGCCAGAACATCCAGGTG
ACGGCGGACGTCACGGTCAGCATCAACATCAACGACTACTGCCTGCCGGACGCCTGCCAGCCGGGCCAGAAGCCGTTCCA
GTGCCCGCCGCCGACCACCCCGCCGCCTGCCTGCGGCCCCCTCACCCAGGGAAGGGCGCGCAAGGCCGGCAGCAGCCAGG
GCTAG

Upstream 100 bases:

>100_bases
CGCATGGGACGTTACCAGAGCCTATGCGGCCGCCGGAGTAACATTCCCCCTGCGAGACGCACATAATGAACCAATCCTAC
ACCTGTCAGGAGGGACCACC

Downstream 100 bases:

>100_bases
CCGCCGACCTGCGAGGTGAGCGCGCAGTCCGTGGCAGAGAACCTGGTTGCGACGAGTCTGAAGGTCTACGGGATGCGGGA
TGCCGCGGCAGCCCAGAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MPEERLQPAQLEPICIRTTQVYDWCYLNGTTSVLLPDIVFPADTSVVAGIEAAIISVECAEIDRDQDPSGLANVTIRRLV
TFELTFVDVNGNPVPVIVNGVEVTTQTRSRFFDEFIRVCAPDGTTLTCEITDAAARAFMTVINGTPAVQVELFICQNIQV
TADVTVSININDYCLPDACQPGQKPFQCPPPTTPPPACGPLTQGRARKAGSSQG

Sequences:

>Translated_214_residues
MPEERLQPAQLEPICIRTTQVYDWCYLNGTTSVLLPDIVFPADTSVVAGIEAAIISVECAEIDRDQDPSGLANVTIRRLV
TFELTFVDVNGNPVPVIVNGVEVTTQTRSRFFDEFIRVCAPDGTTLTCEITDAAARAFMTVINGTPAVQVELFICQNIQV
TADVTVSININDYCLPDACQPGQKPFQCPPPTTPPPACGPLTQGRARKAGSSQG
>Mature_213_residues
PEERLQPAQLEPICIRTTQVYDWCYLNGTTSVLLPDIVFPADTSVVAGIEAAIISVECAEIDRDQDPSGLANVTIRRLVT
FELTFVDVNGNPVPVIVNGVEVTTQTRSRFFDEFIRVCAPDGTTLTCEITDAAARAFMTVINGTPAVQVELFICQNIQVT
ADVTVSININDYCLPDACQPGQKPFQCPPPTTPPPACGPLTQGRARKAGSSQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23072; Mature: 22941

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEERLQPAQLEPICIRTTQVYDWCYLNGTTSVLLPDIVFPADTSVVAGIEAAIISVECA
CCCHHCCCCCCCCEEEEEEEEEEEEEECCCCEEEECEEECCCCCHHHHCCEEEEEEEEHH
EIDRDQDPSGLANVTIRRLVTFELTFVDVNGNPVPVIVNGVEVTTQTRSRFFDEFIRVCA
HCCCCCCCCCHHHHEEEEEEEEEEEEEEECCCEEEEEEECEEEEHHHHHHHHHHHHHHCC
PDGTTLTCEITDAAARAFMTVINGTPAVQVELFICQNIQVTADVTVSININDYCLPDACQ
CCCCEEEEEECHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCC
PGQKPFQCPPPTTPPPACGPLTQGRARKAGSSQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PEERLQPAQLEPICIRTTQVYDWCYLNGTTSVLLPDIVFPADTSVVAGIEAAIISVECA
CCHHCCCCCCCCEEEEEEEEEEEEEECCCCEEEECEEECCCCCHHHHCCEEEEEEEEHH
EIDRDQDPSGLANVTIRRLVTFELTFVDVNGNPVPVIVNGVEVTTQTRSRFFDEFIRVCA
HCCCCCCCCCHHHHEEEEEEEEEEEEEEECCCEEEEEEECEEEEHHHHHHHHHHHHHHCC
PDGTTLTCEITDAAARAFMTVINGTPAVQVELFICQNIQVTADVTVSININDYCLPDACQ
CCCCEEEEEECHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCC
PGQKPFQCPPPTTPPPACGPLTQGRARKAGSSQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA