| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892515
Identifier: 51892515
GI number: 51892515
Start: 1524650
End: 1524892
Strand: Reverse
Name: 51892515
Synonym: STH1377
Alternate gene names: NA
Gene position: 1524892-1524650 (Counterclockwise)
Preceding gene: 51892516
Following gene: 51892514
Centisome position: 42.76
GC content: 64.2
Gene sequence:
>243_bases GTGAGCGCGCAGTCCGTGGCAGAGAACCTGGTTGCGACGAGTCTGAAGGTCTACGGGATGCGGGATGCCGCGGCAGCCCA GAGGGCGTACGACGCCCTGCGCCAGATCGACGGCGTCCAGCAGATCTCCATGAATGTGCCCCTCCGCAGGATAAGCGTTA CTCACACTCCCCGACGGGGAATTACTCAGGAGCTGGTCGCCGCGCTGCGCAGTCTGGGCTTTCACGCGCAGGAAAAGGGC TGA
Upstream 100 bases:
>100_bases GTGCCCGCCGCCGACCACCCCGCCGCCTGCCTGCGGCCCCCTCACCCAGGGAAGGGCGCGCAAGGCCGGCAGCAGCCAGG GCTAGCCGCCGACCTGCGAG
Downstream 100 bases:
>100_bases GCGCCCCCGATGTAGCGGGCGTGCCCTGCTTTCCAACGTCGCCGAGGGCCGGGCATAGTCCGGTCCTCGGTTCGTTACTT ATGGCTGCAAGGAGGCCCCC
Product: heavy metal-transporting ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSAQSVAENLVATSLKVYGMRDAAAAQRAYDALRQIDGVQQISMNVPLRRISVTHTPRRGITQELVAALRSLGFHAQEKG
Sequences:
>Translated_80_residues MSAQSVAENLVATSLKVYGMRDAAAAQRAYDALRQIDGVQQISMNVPLRRISVTHTPRRGITQELVAALRSLGFHAQEKG >Mature_79_residues SAQSVAENLVATSLKVYGMRDAAAAQRAYDALRQIDGVQQISMNVPLRRISVTHTPRRGITQELVAALRSLGFHAQEKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8721; Mature: 8590
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQSVAENLVATSLKVYGMRDAAAAQRAYDALRQIDGVQQISMNVPLRRISVTHTPRRG CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHEECCCCCCCC ITQELVAALRSLGFHAQEKG CHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SAQSVAENLVATSLKVYGMRDAAAAQRAYDALRQIDGVQQISMNVPLRRISVTHTPRRG CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHEECCCCCCCC ITQELVAALRSLGFHAQEKG CHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA