Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892158

Identifier: 51892158

GI number: 51892158

Start: 1134980

End: 1135336

Strand: Reverse

Name: 51892158

Synonym: STH1020

Alternate gene names: NA

Gene position: 1135336-1134980 (Counterclockwise)

Preceding gene: 51892160

Following gene: 51892151

Centisome position: 31.84

GC content: 69.75

Gene sequence:

>357_bases
ATGAGGGAATCGCGCCCCGCACGGCGAATATCGGATCAGGCGGTGATGGCGGTGTTCACCTTCACGCCCCAGGCGGCGCA
GAAGCTGAAGCAGATCATCCAGGAGCGCGGCGGCAACCTGGCGCTCTCCATCGCTGCGGATCCCGAGGTGACCGGCGGTG
CATGGCGGCTCACGCTGGTGCCGCGCCGGCCCTCGACGGCGGTGGTGAGCGGCGTGCCGGTGGAGGCCGATGCGGAGGCG
CTGCGGCTGCTGGACGGCACGATCATCGACTGGGTGATGACGCCCGACGGACCGGGGCTGGGCATCTATGACCAGAACCT
CGTGGACAACGACCCCCGGCGGCGCGGCAGGTTCTGA

Upstream 100 bases:

>100_bases
CACAGCGCGACCGCGGCGATCGCGGCCACGGCCAGTGCGACGACGAGAACGCGGCGCACGCGCCTCCCCCCTTGCACAGG
TTCGTCCTGTTAGGGTGTCC

Downstream 100 bases:

>100_bases
CACGGACCTGCGGTTGACATACGCGGCAATGGGCTCGTATAATGGATGAGTCATGGGCGCCCGTAGCTCAGCAGGATAGA
GCAGCAGTTTCCTAAACTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MRESRPARRISDQAVMAVFTFTPQAAQKLKQIIQERGGNLALSIAADPEVTGGAWRLTLVPRRPSTAVVSGVPVEADAEA
LRLLDGTIIDWVMTPDGPGLGIYDQNLVDNDPRRRGRF

Sequences:

>Translated_118_residues
MRESRPARRISDQAVMAVFTFTPQAAQKLKQIIQERGGNLALSIAADPEVTGGAWRLTLVPRRPSTAVVSGVPVEADAEA
LRLLDGTIIDWVMTPDGPGLGIYDQNLVDNDPRRRGRF
>Mature_118_residues
MRESRPARRISDQAVMAVFTFTPQAAQKLKQIIQERGGNLALSIAADPEVTGGAWRLTLVPRRPSTAVVSGVPVEADAEA
LRLLDGTIIDWVMTPDGPGLGIYDQNLVDNDPRRRGRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12895; Mature: 12895

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRESRPARRISDQAVMAVFTFTPQAAQKLKQIIQERGGNLALSIAADPEVTGGAWRLTLV
CCCCCCCHHCCCCEEEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEE
PRRPSTAVVSGVPVEADAEALRLLDGTIIDWVMTPDGPGLGIYDQNLVDNDPRRRGRF
CCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MRESRPARRISDQAVMAVFTFTPQAAQKLKQIIQERGGNLALSIAADPEVTGGAWRLTLV
CCCCCCCHHCCCCEEEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEE
PRRPSTAVVSGVPVEADAEALRLLDGTIIDWVMTPDGPGLGIYDQNLVDNDPRRRGRF
CCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA