Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is sfsA

Identifier: 51892087

GI number: 51892087

Start: 1064891

End: 1065646

Strand: Reverse

Name: sfsA

Synonym: STH949

Alternate gene names: 51892087

Gene position: 1065646-1064891 (Counterclockwise)

Preceding gene: 51892098

Following gene: 51892086

Centisome position: 29.88

GC content: 71.16

Gene sequence:

>756_bases
GTGAAAGGAGCAGAACCGTTGGCTGAACTTCGTCTGCGGGCCACCTTTCTCGAACGCCCCAACCGCTTCGTCGCCCGGGT
CCGCCTGGAGGACGGCCGGGAGGTGCCGGTGCACGTGGCCTCATCGGGCCGTATGAAGGAGCTTCTGGTGCCCGGTGCGC
CGGTGATCGTGACGCTGCAAGGCGACGCGTCTGCGCAGCCAACCCGGCCGTTCGGGGGCCGGAAGACCGCCGGCAGGCTG
CTCATGGTCCGTACCGGGTCCACCTGGGTCTCGGTGGATACATCCTTGCCCGGGAAGCTCTTCCACCAGGCGGTGGTCGC
GGGGAGCTGCGCTCCCTTCGCCGGGTACACCGAGGTACGTCCCGAGTACCGGTACGGCGGCAGCCGCATCGATTTCCTGC
TGACCGCGCCGGACCTGCCCCCGTGCCTGGTGGAGGTGAAGTCCGTCACCTCCGTGCTGCCGGACGCGGACGGCGCCCGC
GTGGCGCGGTTCCCGGACGCGCCGACGGCCCGCGGCGCCCGCCACCTGGACGAACTGGCCGGGGCCGTGCGGGAAGGGTA
CAGGGCGGCCGTCTGCTTCATCACGCAGCGGGACGACGCCCAGGCCTTCGGCCCGTGGGACGAGATCGATCCGTTCTTCG
GTGAAACCCTGCGCAAAGTGGCTCGGGCCGGGGTGGAGATCCGGGCCTTCGTCACGCACGTGACCCCGGAGGGCGCCGTC
CTGGGCGGGGAGCTTCCCGTACGGCTGGCGCGGTGA

Upstream 100 bases:

>100_bases
TGATTACTTGCAGACACGAAAAGCCTGTAATCTTTAGCATAGGCGAGCCACCCCGAACGGTCAAGGAAAGGCGGTCCACA
GGGGTTGGACTCCGCACGTG

Downstream 100 bases:

>100_bases
GGACCGGGTGGCCGGCAGGAGATCTGTCCTCGCAAGGCTAAAGGAAAGCACGACCAACATTACGTACTCAAACTATTAAC
GTCTCGTGGCATAATGGGAG

Product: sugar fermentation stimulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKGAEPLAELRLRATFLERPNRFVARVRLEDGREVPVHVASSGRMKELLVPGAPVIVTLQGDASAQPTRPFGGRKTAGRL
LMVRTGSTWVSVDTSLPGKLFHQAVVAGSCAPFAGYTEVRPEYRYGGSRIDFLLTAPDLPPCLVEVKSVTSVLPDADGAR
VARFPDAPTARGARHLDELAGAVREGYRAAVCFITQRDDAQAFGPWDEIDPFFGETLRKVARAGVEIRAFVTHVTPEGAV
LGGELPVRLAR

Sequences:

>Translated_251_residues
MKGAEPLAELRLRATFLERPNRFVARVRLEDGREVPVHVASSGRMKELLVPGAPVIVTLQGDASAQPTRPFGGRKTAGRL
LMVRTGSTWVSVDTSLPGKLFHQAVVAGSCAPFAGYTEVRPEYRYGGSRIDFLLTAPDLPPCLVEVKSVTSVLPDADGAR
VARFPDAPTARGARHLDELAGAVREGYRAAVCFITQRDDAQAFGPWDEIDPFFGETLRKVARAGVEIRAFVTHVTPEGAV
LGGELPVRLAR
>Mature_251_residues
MKGAEPLAELRLRATFLERPNRFVARVRLEDGREVPVHVASSGRMKELLVPGAPVIVTLQGDASAQPTRPFGGRKTAGRL
LMVRTGSTWVSVDTSLPGKLFHQAVVAGSCAPFAGYTEVRPEYRYGGSRIDFLLTAPDLPPCLVEVKSVTSVLPDADGAR
VARFPDAPTARGARHLDELAGAVREGYRAAVCFITQRDDAQAFGPWDEIDPFFGETLRKVARAGVEIRAFVTHVTPEGAV
LGGELPVRLAR

Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]

COG id: COG1489

COG function: function code R; DNA-binding protein, stimulates sugar fermentation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sfsA family

Homologues:

Organism=Escherichia coli, GI1786340, Length=239, Percent_Identity=33.0543933054393, Blast_Score=125, Evalue=3e-30,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): SFSA_SYMTH (Q67QV9)

Other databases:

- EMBL:   AP006840
- RefSeq:   YP_074778.1
- GeneID:   2980596
- GenomeReviews:   AP006840_GR
- KEGG:   sth:STH949
- NMPDR:   fig|292459.1.peg.909
- HOGENOM:   HBG655520
- OMA:   NTGSMLN
- BioCyc:   STHE292459:STH949-MONOMER
- HAMAP:   MF_00095
- InterPro:   IPR005224
- TIGRFAMs:   TIGR00230

Pfam domain/function: PF03749 SfsA

EC number: NA

Molecular weight: Translated: 27111; Mature: 27111

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGAEPLAELRLRATFLERPNRFVARVRLEDGREVPVHVASSGRMKELLVPGAPVIVTLQ
CCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEECCCCCEEEEECCCCCEEEEEE
GDASAQPTRPFGGRKTAGRLLMVRTGSTWVSVDTSLPGKLFHQAVVAGSCAPFAGYTEVR
CCCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHCC
PEYRYGGSRIDFLLTAPDLPPCLVEVKSVTSVLPDADGARVARFPDAPTARGARHLDELA
CHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHH
GAVREGYRAAVCFITQRDDAQAFGPWDEIDPFFGETLRKVARAGVEIRAFVTHVTPEGAV
HHHHCCCEEEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHCCCEEEEEEEEECCCCEE
LGGELPVRLAR
ECCCCCEEECC
>Mature Secondary Structure
MKGAEPLAELRLRATFLERPNRFVARVRLEDGREVPVHVASSGRMKELLVPGAPVIVTLQ
CCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEECCCCCEEEEECCCCCEEEEEE
GDASAQPTRPFGGRKTAGRLLMVRTGSTWVSVDTSLPGKLFHQAVVAGSCAPFAGYTEVR
CCCCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHCC
PEYRYGGSRIDFLLTAPDLPPCLVEVKSVTSVLPDADGARVARFPDAPTARGARHLDELA
CHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHH
GAVREGYRAAVCFITQRDDAQAFGPWDEIDPFFGETLRKVARAGVEIRAFVTHVTPEGAV
HHHHCCCEEEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHCCCEEEEEEEEECCCCEE
LGGELPVRLAR
ECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA