Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is napG [H]

Identifier: 51892054

GI number: 51892054

Start: 1036110

End: 1036631

Strand: Reverse

Name: napG [H]

Synonym: STH916

Alternate gene names: 51892054

Gene position: 1036631-1036110 (Counterclockwise)

Preceding gene: 51892055

Following gene: 51892053

Centisome position: 29.07

GC content: 76.05

Gene sequence:

>522_bases
TTGCGGCCGCACAGGTGCTGGCGGCCGGCGGCCGGTGGCTGGCTGGGGCGGCGGCTGCTCCGGCCCCCCGGCGCCCTGCC
CGAGCCCTTCTTCCTGGGGCTCTGCCTCCGCTGCGGCCAGTGCGCCCAGGCCTGCCCGCGCTCGGCCATCCGGATCGCCC
GGTGGGAGCACGGGCTCAGCACGGGTACGCCCTACATCGCCGCCCGGGAGACGGCCTGCGACCTCTGCGGCGGGCAGGCG
CCCGCCTGCGCGGCGGTCTGCCCCACCCAGGCGCTGCACCTGGAACCCGGGGAGCCGGTGCGGATGGGCACCGCGGTCAT
CGACGCCACGCGGTGCCTGGCCCACATGGGCGACATCTGCCGCAGCTGCTTCAACGCCTGCCCCCTGCGGGGCCGGGCAA
TCGTGCTGGAGGGCGCCCTCCGGCCGGTCGTGGATCCAGCGCTCTGCACGGGGTGCGGACTCTGCGAGGAGCACTGCCTG
GTGGAGCCCGCCGCCATACACGTCGAACCGCTGAACCCCTGA

Upstream 100 bases:

>100_bases
CTTTTCTGGGCGCTCCTCCTGCTGCCGCTCGCGGGCTTCCCCTGGTTCCGCGGGACTTACGTCAGCTCCCGGTTCCTGGG
GCTGCCCCTCACCGACCCGT

Downstream 100 bases:

>100_bases
GGCTTGGGGGCGCCCGGCCCGCAGGCGGTGGGCGACCCACGGAGGCCGCGGTGCATGAGGGCGCCGGCCCCGGAGGAGAT
GGGACCGGGGGCGCCGAAAC

Product: nitrate reductase component, ferredoxin-type protein

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MRPHRCWRPAAGGWLGRRLLRPPGALPEPFFLGLCLRCGQCAQACPRSAIRIARWEHGLSTGTPYIAARETACDLCGGQA
PACAAVCPTQALHLEPGEPVRMGTAVIDATRCLAHMGDICRSCFNACPLRGRAIVLEGALRPVVDPALCTGCGLCEEHCL
VEPAAIHVEPLNP

Sequences:

>Translated_173_residues
MRPHRCWRPAAGGWLGRRLLRPPGALPEPFFLGLCLRCGQCAQACPRSAIRIARWEHGLSTGTPYIAARETACDLCGGQA
PACAAVCPTQALHLEPGEPVRMGTAVIDATRCLAHMGDICRSCFNACPLRGRAIVLEGALRPVVDPALCTGCGLCEEHCL
VEPAAIHVEPLNP
>Mature_173_residues
MRPHRCWRPAAGGWLGRRLLRPPGALPEPFFLGLCLRCGQCAQACPRSAIRIARWEHGLSTGTPYIAARETACDLCGGQA
PACAAVCPTQALHLEPGEPVRMGTAVIDATRCLAHMGDICRSCFNACPLRGRAIVLEGALRPVVDPALCTGCGLCEEHCL
VEPAAIHVEPLNP

Specific function: Involved in electron transfer (Probable) [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788533, Length=166, Percent_Identity=42.7710843373494, Blast_Score=118, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004494
- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18427; Mature: 18427

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
11.6 %Cys+Met (Translated Protein)
9.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
11.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPHRCWRPAAGGWLGRRLLRPPGALPEPFFLGLCLRCGQCAQACPRSAIRIARWEHGLS
CCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
TGTPYIAARETACDLCGGQAPACAAVCPTQALHLEPGEPVRMGTAVIDATRCLAHMGDIC
CCCCCEEEHHHHHHHCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RSCFNACPLRGRAIVLEGALRPVVDPALCTGCGLCEEHCLVEPAAIHVEPLNP
HHHHHHCCCCCCEEEECCCHHHHCCHHHHHCCCCHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure
MRPHRCWRPAAGGWLGRRLLRPPGALPEPFFLGLCLRCGQCAQACPRSAIRIARWEHGLS
CCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
TGTPYIAARETACDLCGGQAPACAAVCPTQALHLEPGEPVRMGTAVIDATRCLAHMGDIC
CCCCCEEEHHHHHHHCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RSCFNACPLRGRAIVLEGALRPVVDPALCTGCGLCEEHCLVEPAAIHVEPLNP
HHHHHHCCCCCCEEEECCCHHHHCCHHHHHCCCCHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]