| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is napG [H]
Identifier: 51892054
GI number: 51892054
Start: 1036110
End: 1036631
Strand: Reverse
Name: napG [H]
Synonym: STH916
Alternate gene names: 51892054
Gene position: 1036631-1036110 (Counterclockwise)
Preceding gene: 51892055
Following gene: 51892053
Centisome position: 29.07
GC content: 76.05
Gene sequence:
>522_bases TTGCGGCCGCACAGGTGCTGGCGGCCGGCGGCCGGTGGCTGGCTGGGGCGGCGGCTGCTCCGGCCCCCCGGCGCCCTGCC CGAGCCCTTCTTCCTGGGGCTCTGCCTCCGCTGCGGCCAGTGCGCCCAGGCCTGCCCGCGCTCGGCCATCCGGATCGCCC GGTGGGAGCACGGGCTCAGCACGGGTACGCCCTACATCGCCGCCCGGGAGACGGCCTGCGACCTCTGCGGCGGGCAGGCG CCCGCCTGCGCGGCGGTCTGCCCCACCCAGGCGCTGCACCTGGAACCCGGGGAGCCGGTGCGGATGGGCACCGCGGTCAT CGACGCCACGCGGTGCCTGGCCCACATGGGCGACATCTGCCGCAGCTGCTTCAACGCCTGCCCCCTGCGGGGCCGGGCAA TCGTGCTGGAGGGCGCCCTCCGGCCGGTCGTGGATCCAGCGCTCTGCACGGGGTGCGGACTCTGCGAGGAGCACTGCCTG GTGGAGCCCGCCGCCATACACGTCGAACCGCTGAACCCCTGA
Upstream 100 bases:
>100_bases CTTTTCTGGGCGCTCCTCCTGCTGCCGCTCGCGGGCTTCCCCTGGTTCCGCGGGACTTACGTCAGCTCCCGGTTCCTGGG GCTGCCCCTCACCGACCCGT
Downstream 100 bases:
>100_bases GGCTTGGGGGCGCCCGGCCCGCAGGCGGTGGGCGACCCACGGAGGCCGCGGTGCATGAGGGCGCCGGCCCCGGAGGAGAT GGGACCGGGGGCGCCGAAAC
Product: nitrate reductase component, ferredoxin-type protein
Products: reduced acceptor; NO3- [C]
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MRPHRCWRPAAGGWLGRRLLRPPGALPEPFFLGLCLRCGQCAQACPRSAIRIARWEHGLSTGTPYIAARETACDLCGGQA PACAAVCPTQALHLEPGEPVRMGTAVIDATRCLAHMGDICRSCFNACPLRGRAIVLEGALRPVVDPALCTGCGLCEEHCL VEPAAIHVEPLNP
Sequences:
>Translated_173_residues MRPHRCWRPAAGGWLGRRLLRPPGALPEPFFLGLCLRCGQCAQACPRSAIRIARWEHGLSTGTPYIAARETACDLCGGQA PACAAVCPTQALHLEPGEPVRMGTAVIDATRCLAHMGDICRSCFNACPLRGRAIVLEGALRPVVDPALCTGCGLCEEHCL VEPAAIHVEPLNP >Mature_173_residues MRPHRCWRPAAGGWLGRRLLRPPGALPEPFFLGLCLRCGQCAQACPRSAIRIARWEHGLSTGTPYIAARETACDLCGGQA PACAAVCPTQALHLEPGEPVRMGTAVIDATRCLAHMGDICRSCFNACPLRGRAIVLEGALRPVVDPALCTGCGLCEEHCL VEPAAIHVEPLNP
Specific function: Involved in electron transfer (Probable) [H]
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI1788533, Length=166, Percent_Identity=42.7710843373494, Blast_Score=118, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR004494 - InterPro: IPR006311 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18427; Mature: 18427
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 11.6 %Cys+Met (Translated Protein) 9.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 11.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPHRCWRPAAGGWLGRRLLRPPGALPEPFFLGLCLRCGQCAQACPRSAIRIARWEHGLS CCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC TGTPYIAARETACDLCGGQAPACAAVCPTQALHLEPGEPVRMGTAVIDATRCLAHMGDIC CCCCCEEEHHHHHHHCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH RSCFNACPLRGRAIVLEGALRPVVDPALCTGCGLCEEHCLVEPAAIHVEPLNP HHHHHHCCCCCCEEEECCCHHHHCCHHHHHCCCCHHHHHCCCCCEEEEECCCC >Mature Secondary Structure MRPHRCWRPAAGGWLGRRLLRPPGALPEPFFLGLCLRCGQCAQACPRSAIRIARWEHGLS CCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC TGTPYIAARETACDLCGGQAPACAAVCPTQALHLEPGEPVRMGTAVIDATRCLAHMGDIC CCCCCEEEHHHHHHHCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH RSCFNACPLRGRAIVLEGALRPVVDPALCTGCGLCEEHCLVEPAAIHVEPLNP HHHHHHCCCCCCEEEECCCHHHHCCHHHHHCCCCHHHHHCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acceptor; nitrite [C]
Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]