| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892053
Identifier: 51892053
GI number: 51892053
Start: 1035155
End: 1035973
Strand: Reverse
Name: 51892053
Synonym: STH915
Alternate gene names: NA
Gene position: 1035973-1035155 (Counterclockwise)
Preceding gene: 51892054
Following gene: 51892044
Centisome position: 29.05
GC content: 68.99
Gene sequence:
>819_bases ATGACGGATCCGGTCAGCACCCTGAACGCCCTGGTCGCGGGCTTCTCCGGCACGATGGGCGTGTGGGCCCGGTCCCTGCA GACGGACGAGGTCATCCAGGTGGGGGCGTCCGACGATACCTTCCCGAGCGCGTCGACCATCAAGCTGGCGATCTTCTATG AGGTGATGCGCCAGGCCGGCGAGGGGAGGCTGGACCTGAGCGAGCCGCGTGAGCTGCGGACCGAGGACAAGGTGCCCGGC TGCGGCGTGCTGCGCGATCTGAGTCCGGGAATCCGGCTCCCGCTCAGGGATCTCGCCACGCTCATGATGATCATCAGCGA CAACACCGCGTCCAACATGTGCATCGACGCCGTGGGCATCGAGTCGGTCAACCGGTCCATGGACGAGCTGGGGCTCACGG GGCTGCGCCTCCGCTGGAAGTTCTTCGGCGCCCCCGCCGGCCAGCCGGTCAACGCCGCAGTGCCCTCCCAGCTCGGGCGG CTGATGGACATGATCGTCCGCCGCCAGGTGCTGACCCCGGAGGCCTGCGACGAGATGCTCCGGGTCATGAAGCAGGTGCA GAGCCCCTACGCCGCGCGCTACCTGCCCGGCGGTTCGCAGTACGACAGGCCGCCGGAGGGGCCGGTCATCGCGGCCAAGT TCGGAAGCATCACCGGCTGCCGGCACGAGGTCGGCGCGGTCTGGAAGGGCGGCCGGGGCTTCGTGTTCAGCGTGATGACC AAGGACTGCAAGGACGAGCGGCGGGTCGAGGACAACGAGGGCGTGCTGGCCGTCGGCCGGGCGGTTGCGATTCTCTACCG GCACTTCCTCGAGCCCTGA
Upstream 100 bases:
>100_bases CCACGGAGGCCGCGGTGCATGAGGGCGCCGGCCCCGGAGGAGATGGGACCGGGGGCGCCGAAACACCCACGGCGAAAGGC TGTGGGAGGTGGGCGAGAGC
Downstream 100 bases:
>100_bases CGGAACGAAGGCGGGCCGGCCCGCCCGGGCCGACCGGGCCGCAGCGCGCAAGAGGCCGGCACGGCGCAGCGGAGAGCCTG TGCCGGCGGCAGGAGGAAAC
Product: beta-lactamase
Products: substituted beta-amino acid
Alternate protein names: Beta-Lactamase Class A-Like Protein; Beta-Lactamase Class A; Carboxylesterase; Peptidase; Beta-Lactamase Protein; NLP/P60 Protein; Beta-Lactamase-Like Protein
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MTDPVSTLNALVAGFSGTMGVWARSLQTDEVIQVGASDDTFPSASTIKLAIFYEVMRQAGEGRLDLSEPRELRTEDKVPG CGVLRDLSPGIRLPLRDLATLMMIISDNTASNMCIDAVGIESVNRSMDELGLTGLRLRWKFFGAPAGQPVNAAVPSQLGR LMDMIVRRQVLTPEACDEMLRVMKQVQSPYAARYLPGGSQYDRPPEGPVIAAKFGSITGCRHEVGAVWKGGRGFVFSVMT KDCKDERRVEDNEGVLAVGRAVAILYRHFLEP
Sequences:
>Translated_272_residues MTDPVSTLNALVAGFSGTMGVWARSLQTDEVIQVGASDDTFPSASTIKLAIFYEVMRQAGEGRLDLSEPRELRTEDKVPG CGVLRDLSPGIRLPLRDLATLMMIISDNTASNMCIDAVGIESVNRSMDELGLTGLRLRWKFFGAPAGQPVNAAVPSQLGR LMDMIVRRQVLTPEACDEMLRVMKQVQSPYAARYLPGGSQYDRPPEGPVIAAKFGSITGCRHEVGAVWKGGRGFVFSVMT KDCKDERRVEDNEGVLAVGRAVAILYRHFLEP >Mature_271_residues TDPVSTLNALVAGFSGTMGVWARSLQTDEVIQVGASDDTFPSASTIKLAIFYEVMRQAGEGRLDLSEPRELRTEDKVPGC GVLRDLSPGIRLPLRDLATLMMIISDNTASNMCIDAVGIESVNRSMDELGLTGLRLRWKFFGAPAGQPVNAAVPSQLGRL MDMIVRRQVLTPEACDEMLRVMKQVQSPYAARYLPGGSQYDRPPEGPVIAAKFGSITGCRHEVGAVWKGGRGFVFSVMTK DCKDERRVEDNEGVLAVGRAVAILYRHFLEP
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.2.6
Molecular weight: Translated: 29692; Mature: 29560
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPVSTLNALVAGFSGTMGVWARSLQTDEVIQVGASDDTFPSASTIKLAIFYEVMRQAG CCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHC EGRLDLSEPRELRTEDKVPGCGVLRDLSPGIRLPLRDLATLMMIISDNTASNMCIDAVGI CCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHH ESVNRSMDELGLTGLRLRWKFFGAPAGQPVNAAVPSQLGRLMDMIVRRQVLTPEACDEML HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH RVMKQVQSPYAARYLPGGSQYDRPPEGPVIAAKFGSITGCRHEVGAVWKGGRGFVFSVMT HHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCEEECCCCEEEEHHH KDCKDERRVEDNEGVLAVGRAVAILYRHFLEP HCCHHHHCCCCCCCEEHHHHHHHHHHHHHCCC >Mature Secondary Structure TDPVSTLNALVAGFSGTMGVWARSLQTDEVIQVGASDDTFPSASTIKLAIFYEVMRQAG CCHHHHHHHHHHCCCCHHHHHHHHCCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHC EGRLDLSEPRELRTEDKVPGCGVLRDLSPGIRLPLRDLATLMMIISDNTASNMCIDAVGI CCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHH ESVNRSMDELGLTGLRLRWKFFGAPAGQPVNAAVPSQLGRLMDMIVRRQVLTPEACDEML HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH RVMKQVQSPYAARYLPGGSQYDRPPEGPVIAAKFGSITGCRHEVGAVWKGGRGFVFSVMT HHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCEEECCCCEEEEHHH KDCKDERRVEDNEGVLAVGRAVAILYRHFLEP HCCHHHHCCCCCCCEEHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-lactam; H2O
Specific reaction: A beta-lactam + H2O = a substituted beta-amino acid
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA