Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892053

Identifier: 51892053

GI number: 51892053

Start: 1035155

End: 1035973

Strand: Reverse

Name: 51892053

Synonym: STH915

Alternate gene names: NA

Gene position: 1035973-1035155 (Counterclockwise)

Preceding gene: 51892054

Following gene: 51892044

Centisome position: 29.05

GC content: 68.99

Gene sequence:

>819_bases
ATGACGGATCCGGTCAGCACCCTGAACGCCCTGGTCGCGGGCTTCTCCGGCACGATGGGCGTGTGGGCCCGGTCCCTGCA
GACGGACGAGGTCATCCAGGTGGGGGCGTCCGACGATACCTTCCCGAGCGCGTCGACCATCAAGCTGGCGATCTTCTATG
AGGTGATGCGCCAGGCCGGCGAGGGGAGGCTGGACCTGAGCGAGCCGCGTGAGCTGCGGACCGAGGACAAGGTGCCCGGC
TGCGGCGTGCTGCGCGATCTGAGTCCGGGAATCCGGCTCCCGCTCAGGGATCTCGCCACGCTCATGATGATCATCAGCGA
CAACACCGCGTCCAACATGTGCATCGACGCCGTGGGCATCGAGTCGGTCAACCGGTCCATGGACGAGCTGGGGCTCACGG
GGCTGCGCCTCCGCTGGAAGTTCTTCGGCGCCCCCGCCGGCCAGCCGGTCAACGCCGCAGTGCCCTCCCAGCTCGGGCGG
CTGATGGACATGATCGTCCGCCGCCAGGTGCTGACCCCGGAGGCCTGCGACGAGATGCTCCGGGTCATGAAGCAGGTGCA
GAGCCCCTACGCCGCGCGCTACCTGCCCGGCGGTTCGCAGTACGACAGGCCGCCGGAGGGGCCGGTCATCGCGGCCAAGT
TCGGAAGCATCACCGGCTGCCGGCACGAGGTCGGCGCGGTCTGGAAGGGCGGCCGGGGCTTCGTGTTCAGCGTGATGACC
AAGGACTGCAAGGACGAGCGGCGGGTCGAGGACAACGAGGGCGTGCTGGCCGTCGGCCGGGCGGTTGCGATTCTCTACCG
GCACTTCCTCGAGCCCTGA

Upstream 100 bases:

>100_bases
CCACGGAGGCCGCGGTGCATGAGGGCGCCGGCCCCGGAGGAGATGGGACCGGGGGCGCCGAAACACCCACGGCGAAAGGC
TGTGGGAGGTGGGCGAGAGC

Downstream 100 bases:

>100_bases
CGGAACGAAGGCGGGCCGGCCCGCCCGGGCCGACCGGGCCGCAGCGCGCAAGAGGCCGGCACGGCGCAGCGGAGAGCCTG
TGCCGGCGGCAGGAGGAAAC

Product: beta-lactamase

Products: substituted beta-amino acid

Alternate protein names: Beta-Lactamase Class A-Like Protein; Beta-Lactamase Class A; Carboxylesterase; Peptidase; Beta-Lactamase Protein; NLP/P60 Protein; Beta-Lactamase-Like Protein

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MTDPVSTLNALVAGFSGTMGVWARSLQTDEVIQVGASDDTFPSASTIKLAIFYEVMRQAGEGRLDLSEPRELRTEDKVPG
CGVLRDLSPGIRLPLRDLATLMMIISDNTASNMCIDAVGIESVNRSMDELGLTGLRLRWKFFGAPAGQPVNAAVPSQLGR
LMDMIVRRQVLTPEACDEMLRVMKQVQSPYAARYLPGGSQYDRPPEGPVIAAKFGSITGCRHEVGAVWKGGRGFVFSVMT
KDCKDERRVEDNEGVLAVGRAVAILYRHFLEP

Sequences:

>Translated_272_residues
MTDPVSTLNALVAGFSGTMGVWARSLQTDEVIQVGASDDTFPSASTIKLAIFYEVMRQAGEGRLDLSEPRELRTEDKVPG
CGVLRDLSPGIRLPLRDLATLMMIISDNTASNMCIDAVGIESVNRSMDELGLTGLRLRWKFFGAPAGQPVNAAVPSQLGR
LMDMIVRRQVLTPEACDEMLRVMKQVQSPYAARYLPGGSQYDRPPEGPVIAAKFGSITGCRHEVGAVWKGGRGFVFSVMT
KDCKDERRVEDNEGVLAVGRAVAILYRHFLEP
>Mature_271_residues
TDPVSTLNALVAGFSGTMGVWARSLQTDEVIQVGASDDTFPSASTIKLAIFYEVMRQAGEGRLDLSEPRELRTEDKVPGC
GVLRDLSPGIRLPLRDLATLMMIISDNTASNMCIDAVGIESVNRSMDELGLTGLRLRWKFFGAPAGQPVNAAVPSQLGRL
MDMIVRRQVLTPEACDEMLRVMKQVQSPYAARYLPGGSQYDRPPEGPVIAAKFGSITGCRHEVGAVWKGGRGFVFSVMTK
DCKDERRVEDNEGVLAVGRAVAILYRHFLEP

Specific function: Unknown

COG id: COG2367

COG function: function code V; Beta-lactamase class A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.2.6

Molecular weight: Translated: 29692; Mature: 29560

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPVSTLNALVAGFSGTMGVWARSLQTDEVIQVGASDDTFPSASTIKLAIFYEVMRQAG
CCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHC
EGRLDLSEPRELRTEDKVPGCGVLRDLSPGIRLPLRDLATLMMIISDNTASNMCIDAVGI
CCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHH
ESVNRSMDELGLTGLRLRWKFFGAPAGQPVNAAVPSQLGRLMDMIVRRQVLTPEACDEML
HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RVMKQVQSPYAARYLPGGSQYDRPPEGPVIAAKFGSITGCRHEVGAVWKGGRGFVFSVMT
HHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCEEECCCCEEEEHHH
KDCKDERRVEDNEGVLAVGRAVAILYRHFLEP
HCCHHHHCCCCCCCEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDPVSTLNALVAGFSGTMGVWARSLQTDEVIQVGASDDTFPSASTIKLAIFYEVMRQAG
CCHHHHHHHHHHCCCCHHHHHHHHCCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHHHC
EGRLDLSEPRELRTEDKVPGCGVLRDLSPGIRLPLRDLATLMMIISDNTASNMCIDAVGI
CCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHH
ESVNRSMDELGLTGLRLRWKFFGAPAGQPVNAAVPSQLGRLMDMIVRRQVLTPEACDEML
HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RVMKQVQSPYAARYLPGGSQYDRPPEGPVIAAKFGSITGCRHEVGAVWKGGRGFVFSVMT
HHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCEEECCCCEEEEHHH
KDCKDERRVEDNEGVLAVGRAVAILYRHFLEP
HCCHHHHCCCCCCCEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: beta-lactam; H2O

Specific reaction: A beta-lactam + H2O = a substituted beta-amino acid

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA