Click here to switch to the map view.

The map label for this gene is ybaW [C]

Identifier: 51892016

GI number: 51892016

Start: 988886

End: 989278

Strand: Reverse

Name: ybaW [C]

Synonym: STH878

Alternate gene names: 51892016

Gene position: 989278-988886 (Counterclockwise)

Preceding gene: 51892020

Following gene: 51892015

Centisome position: 27.74

GC content: 62.6

Gene sequence:

>393_bases
ATGGAGCAAGTGGTGATCTTCCGGGACATCGACATGATGGGCCACGTCAACAACGCCGTCTACGCGTCCTATTTCGAGGC
CGCGCGCGTGGAGTATTTCTATCAGCTCCTGGACGGGAAGACTGACCGGTTCCCCTTCATCGTCGCCGAGTTGACCATCA
CGTACAAGTCGCCCGCCTACCTCCGGGAGCGGCTGCTCATCGGCCAGCGGGTCAGCGAGATCCGCAACTCCAGCATGGTC
ATCGACGGGCAGATCGTGGAGAAGACCACCGGCCGTCTGGTGGCCACCAGCCGGGTAGTCGGCGTGCACTACGACTACAA
GGAGCAGCGCCCGGTCCCCATTCCCCCGGAACTGCGAGACCTGATCGCCCGCTTCGAAGGGAGGGCCTTATGA

Upstream 100 bases:

>100_bases
CGTTGTACTGGTTCTGAGCAGGATCTGTCAACGGGCGGATGGAACTGACAGGACAGAATGCTGTGGGGAGGGTCAACCGT
TGGAGGGTTTCCCTTTCGTC

Downstream 100 bases:

>100_bases
TCGGGAACCGTCGCGCCGCGCTGCTCGCCCTGGCCGCGCTTGTCGTGGCGGGCTGCGCCGCCCCGGACAGGGGGGAGATT
TCGACGGAGCCCCGCCCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MEQVVIFRDIDMMGHVNNAVYASYFEAARVEYFYQLLDGKTDRFPFIVAELTITYKSPAYLRERLLIGQRVSEIRNSSMV
IDGQIVEKTTGRLVATSRVVGVHYDYKEQRPVPIPPELRDLIARFEGRAL

Sequences:

>Translated_130_residues
MEQVVIFRDIDMMGHVNNAVYASYFEAARVEYFYQLLDGKTDRFPFIVAELTITYKSPAYLRERLLIGQRVSEIRNSSMV
IDGQIVEKTTGRLVATSRVVGVHYDYKEQRPVPIPPELRDLIARFEGRAL
>Mature_130_residues
MEQVVIFRDIDMMGHVNNAVYASYFEAARVEYFYQLLDGKTDRFPFIVAELTITYKSPAYLRERLLIGQRVSEIRNSSMV
IDGQIVEKTTGRLVATSRVVGVHYDYKEQRPVPIPPELRDLIARFEGRAL

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15031; Mature: 15031

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQVVIFRDIDMMGHVNNAVYASYFEAARVEYFYQLLDGKTDRFPFIVAELTITYKSPAY
CCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHH
LRERLLIGQRVSEIRNSSMVIDGQIVEKTTGRLVATSRVVGVHYDYKEQRPVPIPPELRD
HHHHHHHHHHHHHHCCCCEEECCEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHH
LIARFEGRAL
HHHHHCCCCC
>Mature Secondary Structure
MEQVVIFRDIDMMGHVNNAVYASYFEAARVEYFYQLLDGKTDRFPFIVAELTITYKSPAY
CCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCHHH
LRERLLIGQRVSEIRNSSMVIDGQIVEKTTGRLVATSRVVGVHYDYKEQRPVPIPPELRD
HHHHHHHHHHHHHHCCCCEEECCEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHH
LIARFEGRAL
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA