Click here to switch to the map view.

The map label for this gene is 51892020

Identifier: 51892020

GI number: 51892020

Start: 994233

End: 994589

Strand: Reverse

Name: 51892020

Synonym: STH882

Alternate gene names: NA

Gene position: 994589-994233 (Counterclockwise)

Preceding gene: 51892023

Following gene: 51892016

Centisome position: 27.89

GC content: 70.31

Gene sequence:

>357_bases
GTGCCCCAGTGCCCACCCGGCTCCTTTTCGTACACGGTGCGGCCGGGAGACAACTTCTGGACGCTGGCCTGGCGGTTCGG
CACCACCCCTCAGGCCATCGCCCGGGCCAACCCGGGCGTGAACTCCTGGTCGCTGCGCATCGGCCAGACCCTCTGCATCC
CGGGCTGGTCCCCCTGGGTCACGCCGCCGCAAGGGCGATGCCCCCAGGGCTGGGAACCCTACCGGATCCAGCCGGGCGAC
ACCCTGGGCAGCATCGCCTGGGAGCGGCAGACCACCGTGGCCAACCTGCTGCGGGTCAACCCGGTGAACCCGAACAACCT
GCGCATCGGCCAGATCATCTGCGTGCCGGCCCGATAA

Upstream 100 bases:

>100_bases
GAGGCCGGGCCCTCCCGGGTGCTGTGGAGATGGCTTCGTCACCAGGAGGCGCCCTCACATAGGCTGGGGATGAGACCCAC
ACTTCTGCGAGGTGAGCCCA

Downstream 100 bases:

>100_bases
GAGGGGAGGGGTTTGCCCCTCCCCTTCCGCTTATCCGGCTTCCTGCGACTCGTACTGCTGGCGCAGCTGCGCCACCACGT
TGGGATCGGCCAGAGTGGTG

Product: cell wall degradation protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MPQCPPGSFSYTVRPGDNFWTLAWRFGTTPQAIARANPGVNSWSLRIGQTLCIPGWSPWVTPPQGRCPQGWEPYRIQPGD
TLGSIAWERQTTVANLLRVNPVNPNNLRIGQIICVPAR

Sequences:

>Translated_118_residues
MPQCPPGSFSYTVRPGDNFWTLAWRFGTTPQAIARANPGVNSWSLRIGQTLCIPGWSPWVTPPQGRCPQGWEPYRIQPGD
TLGSIAWERQTTVANLLRVNPVNPNNLRIGQIICVPAR
>Mature_117_residues
PQCPPGSFSYTVRPGDNFWTLAWRFGTTPQAIARANPGVNSWSLRIGQTLCIPGWSPWVTPPQGRCPQGWEPYRIQPGDT
LGSIAWERQTTVANLLRVNPVNPNNLRIGQIICVPAR

Specific function: Unknown

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13124; Mature: 12993

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQCPPGSFSYTVRPGDNFWTLAWRFGTTPQAIARANPGVNSWSLRIGQTLCIPGWSPWV
CCCCCCCCCEEEECCCCCEEEEEEEECCCHHHHHHCCCCCCEEEEEECCEEEECCCCCCC
TPPQGRCPQGWEPYRIQPGDTLGSIAWERQTTVANLLRVNPVNPNNLRIGQIICVPAR
CCCCCCCCCCCCCEEECCCCCCCCEEECCCCCEEEEEEECCCCCCCEEEEEEEEEECC
>Mature Secondary Structure 
PQCPPGSFSYTVRPGDNFWTLAWRFGTTPQAIARANPGVNSWSLRIGQTLCIPGWSPWV
CCCCCCCCEEEECCCCCEEEEEEEECCCHHHHHHCCCCCCEEEEEECCEEEECCCCCCC
TPPQGRCPQGWEPYRIQPGDTLGSIAWERQTTVANLLRVNPVNPNNLRIGQIICVPAR
CCCCCCCCCCCCCEEECCCCCCCCEEECCCCCEEEEEEECCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA