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The map label for this gene is yebA [H]

Identifier: 51892015

GI number: 51892015

Start: 987948

End: 988772

Strand: Reverse

Name: yebA [H]

Synonym: STH877

Alternate gene names: 51892015

Gene position: 988772-987948 (Counterclockwise)

Preceding gene: 51892016

Following gene: 51892014

Centisome position: 27.73

GC content: 69.7

Gene sequence:

>825_bases
GTGCAACTCCCAGCTTCTGCCCCGGTCATCACGCTTCGGCCCGCGCAGGTGCTGCAAGGGGACTTCGCGGTCCTGAAGGT
CGACCAGCCGCTGCCCGGCGAGCCGGCGCTGCACGTGGAGGGGCTCTCCGAGCAGCCGAAGCTGTTCCTGCTCGACCGGC
ATCCCACCGCCTTCATCGGCATCCCGGCCGCGGCGCCGGTGGGCACCTACCCCGTTCGCCTCACCTGGGAAGGCGGCGAG
TGGGAAGGCACCCTGGAGGTGGTGAGGAAGGACTTCACCGTCGACCGGCTGGAAGTGACCGCGGAGCAGGAGCAGATCTA
CTACGATCCCCGCCAGGCCGAGCAGTGGGAGAAGCTGTATCGGCTGCGCTCCACCAGCTTCCCGGAACCGCTCTGGCAGG
GCGCGTTCCGGCCGCCGCTGGACGGCGAGCTGTGGGTGACCACCTACTTCGGCGAGATCCGCATCGTCAACGGGGTCGAG
ACGGGCCGGCACAGCGGGATGGACTTCGGCGCGCCCCTGGGCACCCCCATCTACGCGCCGGCCCGGGGAAGGGTGATCCT
GGCCGAAGAGTTCATCGTGTCGGGCCGGACCATCGTCATCGACCACGGACTCAACCTCTTCACGGCGTACTACCACTGCG
AGGAGCTGCTGGTGCAGCCGGGCGACTGGGTGGAGCCCGGAGACCCCATCGGCACCGTGGGCTCCACCGGCTTCTCCACC
GGCCCCCATCTGCACTGGACAGCCACCGTGGGCAACACGCCGGTGGACCCGTGGCCGCTCACACAGGGCAGCGTCGCCGA
CCTGTTCGCCGGGGGACGGGACTGA

Upstream 100 bases:

>100_bases
CGCCGCGCTGCTCGCCCTGGCCGCGCTTGTCGTGGCGGGCTGCGCCGCCCCGGACAGGGGGGAGATTTCGACGGAGCCCC
GCCCCGTCCCTGCGGAGATG

Downstream 100 bases:

>100_bases
CCCGCCCGCTTGAAGGGCGGGATGCGCCGGTGATAGCATTGAGACAGCGCTGCATAGGCGAAGGGGGGATCGCCGTGGGA
CGGGGAACGGAACCGCGCGC

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MQLPASAPVITLRPAQVLQGDFAVLKVDQPLPGEPALHVEGLSEQPKLFLLDRHPTAFIGIPAAAPVGTYPVRLTWEGGE
WEGTLEVVRKDFTVDRLEVTAEQEQIYYDPRQAEQWEKLYRLRSTSFPEPLWQGAFRPPLDGELWVTTYFGEIRIVNGVE
TGRHSGMDFGAPLGTPIYAPARGRVILAEEFIVSGRTIVIDHGLNLFTAYYHCEELLVQPGDWVEPGDPIGTVGSTGFST
GPHLHWTATVGNTPVDPWPLTQGSVADLFAGGRD

Sequences:

>Translated_274_residues
MQLPASAPVITLRPAQVLQGDFAVLKVDQPLPGEPALHVEGLSEQPKLFLLDRHPTAFIGIPAAAPVGTYPVRLTWEGGE
WEGTLEVVRKDFTVDRLEVTAEQEQIYYDPRQAEQWEKLYRLRSTSFPEPLWQGAFRPPLDGELWVTTYFGEIRIVNGVE
TGRHSGMDFGAPLGTPIYAPARGRVILAEEFIVSGRTIVIDHGLNLFTAYYHCEELLVQPGDWVEPGDPIGTVGSTGFST
GPHLHWTATVGNTPVDPWPLTQGSVADLFAGGRD
>Mature_274_residues
MQLPASAPVITLRPAQVLQGDFAVLKVDQPLPGEPALHVEGLSEQPKLFLLDRHPTAFIGIPAAAPVGTYPVRLTWEGGE
WEGTLEVVRKDFTVDRLEVTAEQEQIYYDPRQAEQWEKLYRLRSTSFPEPLWQGAFRPPLDGELWVTTYFGEIRIVNGVE
TGRHSGMDFGAPLGTPIYAPARGRVILAEEFIVSGRTIVIDHGLNLFTAYYHCEELLVQPGDWVEPGDPIGTVGSTGFST
GPHLHWTATVGNTPVDPWPLTQGSVADLFAGGRD

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=140, Percent_Identity=37.1428571428571, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082174, Length=135, Percent_Identity=31.8518518518519, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 30164; Mature: 30164

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPASAPVITLRPAQVLQGDFAVLKVDQPLPGEPALHVEGLSEQPKLFLLDRHPTAFIG
CCCCCCCCEEEECHHHHHCCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEECCCCEEEE
IPAAAPVGTYPVRLTWEGGEWEGTLEVVRKDFTVDRLEVTAEQEQIYYDPRQAEQWEKLY
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEEEECCCEEEECCHHHHHHHHHH
RLRSTSFPEPLWQGAFRPPLDGELWVTTYFGEIRIVNGVETGRHSGMDFGAPLGTPIYAP
HHHCCCCCCHHHCCCCCCCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCEECC
ARGRVILAEEFIVSGRTIVIDHGLNLFTAYYHCEELLVQPGDWVEPGDPIGTVGSTGFST
CCCCEEEEEHEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GPHLHWTATVGNTPVDPWPLTQGSVADLFAGGRD
CCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MQLPASAPVITLRPAQVLQGDFAVLKVDQPLPGEPALHVEGLSEQPKLFLLDRHPTAFIG
CCCCCCCCEEEECHHHHHCCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEECCCCEEEE
IPAAAPVGTYPVRLTWEGGEWEGTLEVVRKDFTVDRLEVTAEQEQIYYDPRQAEQWEKLY
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEEEECCCEEEECCHHHHHHHHHH
RLRSTSFPEPLWQGAFRPPLDGELWVTTYFGEIRIVNGVETGRHSGMDFGAPLGTPIYAP
HHHCCCCCCHHHCCCCCCCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCCEECC
ARGRVILAEEFIVSGRTIVIDHGLNLFTAYYHCEELLVQPGDWVEPGDPIGTVGSTGFST
CCCCEEEEEHEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GPHLHWTATVGNTPVDPWPLTQGSVADLFAGGRD
CCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]