| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892014
Identifier: 51892014
GI number: 51892014
Start: 987335
End: 987724
Strand: Reverse
Name: 51892014
Synonym: STH876
Alternate gene names: NA
Gene position: 987724-987335 (Counterclockwise)
Preceding gene: 51892015
Following gene: 51892010
Centisome position: 27.7
GC content: 69.49
Gene sequence:
>390_bases ATGCTGATCTGCCTGACGGCCGATCACCTGGTCGGCCTGCACCGCCGGATCATCGCCGAAACCGGGGGACCTCACGGGGT GCGCGACCTGGGCGGCGTGCAATCGGCCGCCGCCCGCCCGTTCCGGACCTACGACGGCCAGGCGCTCTACCCGACCCTCG AGGAGAAGGCCGCCGCCTTGGCGGAGGGCATCTCCCGGAACCATCCCTTCGTGGACGGCAACAAGCGCGTGGCCATCGCG GCCGGATGCCTCTTCCTGATGCTCAACGGCCGGGAGATCACCGCATCGGAGCAGGAGATGGAGCGGACGGCCTGGGCGCT GGCCGTGCGGGAGATCGACCTGCAGCAACTGGCAGACTGGTTCCGGCAGCACAGCCGGGAGAAGAGCTGA
Upstream 100 bases:
>100_bases CGGAGGAGCGCGAGGCGCGGCCGGCCACGGACAAGGAGGTGGAAGCCGCTATGGACGCGTTCTTCGAGCGCTACCGGCGG GTGCTGGAGCGGCTGGCTAC
Downstream 100 bases:
>100_bases AGAGCCGGCTGCCGCCCAAGAACCGGGCGGCAGCCGGCCTTTGCCGCACGCCTTGGCCTTCGAGCCACAGCGGCGACACA TGCTCACGCCGCCTTGTCGT
Product: death on curing protein
Products: NA
Alternate protein names: Death On Curing Protein; Death-On-Curing Protein; Prophage Maintenance System Killer Protein; Xin-Antitoxin System Toxin Component Fic Family; Fic Family xin-Antitoxin System Toxin Component; Death On Curing xin Protein Doc; Death-On-Curing Protein DOC; Death ON Curing Protein; Doc Protein; Addiction Module xin
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MLICLTADHLVGLHRRIIAETGGPHGVRDLGGVQSAAARPFRTYDGQALYPTLEEKAAALAEGISRNHPFVDGNKRVAIA AGCLFLMLNGREITASEQEMERTAWALAVREIDLQQLADWFRQHSREKS
Sequences:
>Translated_129_residues MLICLTADHLVGLHRRIIAETGGPHGVRDLGGVQSAAARPFRTYDGQALYPTLEEKAAALAEGISRNHPFVDGNKRVAIA AGCLFLMLNGREITASEQEMERTAWALAVREIDLQQLADWFRQHSREKS >Mature_129_residues MLICLTADHLVGLHRRIIAETGGPHGVRDLGGVQSAAARPFRTYDGQALYPTLEEKAAALAEGISRNHPFVDGNKRVAIA AGCLFLMLNGREITASEQEMERTAWALAVREIDLQQLADWFRQHSREKS
Specific function: Unknown
COG id: COG3654
COG function: function code R; Prophage maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14251; Mature: 14251
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLICLTADHLVGLHRRIIAETGGPHGVRDLGGVQSAAARPFRTYDGQALYPTLEEKAAAL CEEEEEHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHCCCCCCCCCCEECCCHHHHHHHH AEGISRNHPFVDGNKRVAIAAGCLFLMLNGREITASEQEMERTAWALAVREIDLQQLADW HHHHHCCCCCCCCCCEEEHHHHEEHEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH FRQHSREKS HHHHCCCCC >Mature Secondary Structure MLICLTADHLVGLHRRIIAETGGPHGVRDLGGVQSAAARPFRTYDGQALYPTLEEKAAAL CEEEEEHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHCCCCCCCCCCEECCCHHHHHHHH AEGISRNHPFVDGNKRVAIAAGCLFLMLNGREITASEQEMERTAWALAVREIDLQQLADW HHHHHCCCCCCCCCCEEEHHHHEEHEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH FRQHSREKS HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA