| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51891996
Identifier: 51891996
GI number: 51891996
Start: 969496
End: 970098
Strand: Reverse
Name: 51891996
Synonym: STH858
Alternate gene names: NA
Gene position: 970098-969496 (Counterclockwise)
Preceding gene: 51891997
Following gene: 51891982
Centisome position: 27.2
GC content: 66.5
Gene sequence:
>603_bases GTGATGGAACCTGTTGACGCCGCCGGGGATGCGGGGCGGGCTGCTCTGCCACCGGTGCAGACCGACCCCGTGACGTCGGC CGAAGAAGCGCTCGCGCGGATTCCGCCCGCAGCCCTGGAAGGGCGGACATTCGACGCGCTTCTGGTTGAAGACTACGGGC ACCGTAGCCCCGACCGCCAGTGGCATGAGCGGGAGTGCAGCACGTGGATCGTCCAGATCCTCCACCCCAGCTCGGGCGTC ACCTTCCTCATCGATGCCGCAACCGGCGAACTGAACGCCTTCGTCCAGAGCGAAGCGCAAGCTCCGGCGAAGTTGCCGAA GTCGGCTCAGGATGCGGTGGACCTGGTTTTCGAGCAGTGGGGGCACCTTCCGTACATCCGTCAGTTCCCGAGCGCTATCG GATCTTCGGAGAGTCCGCTTCGCCTGCCCGATGAGTCCGAGATAGACCGCTTCTCTGCGCTGTCCACGACCGCCGCCACC GCCGACCGGCGCGGCGAATATCTCGTCACGCCACCCCGAACTGGGAGGAAGACGGCCGCGAAAGACAGGCCAGGTGGGAG TTCACCGTGTATCCCACCGGTTTCGTCGCGCCGCCCGCCGTAG
Upstream 100 bases:
>100_bases CGGGTTCGCTGCGGTCTGTGACGCACTGCTGCTCATCGCGGGCTGCACCGTTCCTGAACCTGCGTCGCCACGTTCCCATC AGGGAACGAGTCCCCCGCCA
Downstream 100 bases:
>100_bases ACGGGGACCCACTCCCGGACTCCCTGACGTGAACCCACAGACAGAGCCCAGAGCACCCAGAGAGCCGAGGGACGACCCTC GGCTCCACACGTTTCGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MMEPVDAAGDAGRAALPPVQTDPVTSAEEALARIPPAALEGRTFDALLVEDYGHRSPDRQWHERECSTWIVQILHPSSGV TFLIDAATGELNAFVQSEAQAPAKLPKSAQDAVDLVFEQWGHLPYIRQFPSAIGSSESPLRLPDESEIDRFSALSTTAAT ADRRGEYLVTPPRTGRKTAAKDRPGGSSPCIPPVSSRRPP
Sequences:
>Translated_200_residues MMEPVDAAGDAGRAALPPVQTDPVTSAEEALARIPPAALEGRTFDALLVEDYGHRSPDRQWHERECSTWIVQILHPSSGV TFLIDAATGELNAFVQSEAQAPAKLPKSAQDAVDLVFEQWGHLPYIRQFPSAIGSSESPLRLPDESEIDRFSALSTTAAT ADRRGEYLVTPPRTGRKTAAKDRPGGSSPCIPPVSSRRPP >Mature_200_residues MMEPVDAAGDAGRAALPPVQTDPVTSAEEALARIPPAALEGRTFDALLVEDYGHRSPDRQWHERECSTWIVQILHPSSGV TFLIDAATGELNAFVQSEAQAPAKLPKSAQDAVDLVFEQWGHLPYIRQFPSAIGSSESPLRLPDESEIDRFSALSTTAAT ADRRGEYLVTPPRTGRKTAAKDRPGGSSPCIPPVSSRRPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21564; Mature: 21564
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEPVDAAGDAGRAALPPVQTDPVTSAEEALARIPPAALEGRTFDALLVEDYGHRSPDRQ CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHCCCCCEEEEEHHCCCCCCCHH WHERECSTWIVQILHPSSGVTFLIDAATGELNAFVQSEAQAPAKLPKSAQDAVDLVFEQW HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHH GHLPYIRQFPSAIGSSESPLRLPDESEIDRFSALSTTAATADRRGEYLVTPPRTGRKTAA CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC KDRPGGSSPCIPPVSSRRPP CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMEPVDAAGDAGRAALPPVQTDPVTSAEEALARIPPAALEGRTFDALLVEDYGHRSPDRQ CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHCCCCCEEEEEHHCCCCCCCHH WHERECSTWIVQILHPSSGVTFLIDAATGELNAFVQSEAQAPAKLPKSAQDAVDLVFEQW HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHH GHLPYIRQFPSAIGSSESPLRLPDESEIDRFSALSTTAATADRRGEYLVTPPRTGRKTAA CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC KDRPGGSSPCIPPVSSRRPP CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA