Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is lepB-3

Identifier: 51598523

GI number: 51598523

Start: 275448

End: 275840

Strand: Direct

Name: lepB-3

Synonym: BG0266

Alternate gene names: NA

Gene position: 275448-275840 (Clockwise)

Preceding gene: 51598521

Following gene: 51598574

Centisome position: 30.46

GC content: 23.16

Gene sequence:

>393_bases
ATGATCCCAATAATATTTGACAAAAATTGGATTGTAAATCACAAATTTGCATATGGACTTAGACTTAAAAGTCGTCAAAA
ATATCTTTTATTGTGGAAAACCCCCAAAAAAAATGAAATGATACTTATTAAAGATCCCATAACAAACAAAATTGCTGTCA
AAAGAATTTTTGCAATTCCGGGAGAAAAATTTAAACAAATAGAAAAAAATAAAATATGCATACATAACTTAAACTTTAAA
ATAGATGAAAATATTTTAAAAAAAAATAATAAAAAAATTCCTGATAATCACTATTTAGTCATAGGAGAAAATAAACAAAC
CTCATTAGACTCAAGAGATTACGGATTCATAAAAATTGATAACATATTGGGAAAAATAATTTATTACTTTTAA

Upstream 100 bases:

>100_bases
AGCTCACAAATATGAACTAGCGTCAATTTTAGCTGCTTGCTTACTTTTAATAACCTTAATAAAGCTATTCTTATCCTTTT
ACATAGTAAAAGGCGAATCA

Downstream 100 bases:

>100_bases
AAAAATATATATTTCCTTAAGTTTTTATTCAATAATACTTGTAAAAATGTTTGAAAGACTTTCTTTTGCTACATTGTCAG
ATGAACTTGTAATTTTTATT

Product: signal peptidase I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MIPIIFDKNWIVNHKFAYGLRLKSRQKYLLLWKTPKKNEMILIKDPITNKIAVKRIFAIPGEKFKQIEKNKICIHNLNFK
IDENILKKNNKKIPDNHYLVIGENKQTSLDSRDYGFIKIDNILGKIIYYF

Sequences:

>Translated_130_residues
MIPIIFDKNWIVNHKFAYGLRLKSRQKYLLLWKTPKKNEMILIKDPITNKIAVKRIFAIPGEKFKQIEKNKICIHNLNFK
IDENILKKNNKKIPDNHYLVIGENKQTSLDSRDYGFIKIDNILGKIIYYF
>Mature_130_residues
MIPIIFDKNWIVNHKFAYGLRLKSRQKYLLLWKTPKKNEMILIKDPITNKIAVKRIFAIPGEKFKQIEKNKICIHNLNFK
IDENILKKNNKKIPDNHYLVIGENKQTSLDSRDYGFIKIDNILGKIIYYF

Specific function: Unknown

COG id: COG0681

COG function: function code U; Signal peptidase I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.89

Molecular weight: Translated: 15521; Mature: 15521

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPIIFDKNWIVNHKFAYGLRLKSRQKYLLLWKTPKKNEMILIKDPITNKIAVKRIFAIP
CCEEEECCCEEEECEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCEEEEEEEECC
GEKFKQIEKNKICIHNLNFKIDENILKKNNKKIPDNHYLVIGENKQTSLDSRDYGFIKID
CHHHHHHCCCCEEEEECCEEECCHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEH
NILGKIIYYF
HHHEEHEEEC
>Mature Secondary Structure
MIPIIFDKNWIVNHKFAYGLRLKSRQKYLLLWKTPKKNEMILIKDPITNKIAVKRIFAIP
CCEEEECCCEEEECEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCEEEEEEEECC
GEKFKQIEKNKICIHNLNFKIDENILKKNNKKIPDNHYLVIGENKQTSLDSRDYGFIKID
CHHHHHHCCCCEEEEECCEEECCHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEH
NILGKIIYYF
HHHEEHEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA