| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is lepB-3
Identifier: 51598523
GI number: 51598523
Start: 275448
End: 275840
Strand: Direct
Name: lepB-3
Synonym: BG0266
Alternate gene names: NA
Gene position: 275448-275840 (Clockwise)
Preceding gene: 51598521
Following gene: 51598574
Centisome position: 30.46
GC content: 23.16
Gene sequence:
>393_bases ATGATCCCAATAATATTTGACAAAAATTGGATTGTAAATCACAAATTTGCATATGGACTTAGACTTAAAAGTCGTCAAAA ATATCTTTTATTGTGGAAAACCCCCAAAAAAAATGAAATGATACTTATTAAAGATCCCATAACAAACAAAATTGCTGTCA AAAGAATTTTTGCAATTCCGGGAGAAAAATTTAAACAAATAGAAAAAAATAAAATATGCATACATAACTTAAACTTTAAA ATAGATGAAAATATTTTAAAAAAAAATAATAAAAAAATTCCTGATAATCACTATTTAGTCATAGGAGAAAATAAACAAAC CTCATTAGACTCAAGAGATTACGGATTCATAAAAATTGATAACATATTGGGAAAAATAATTTATTACTTTTAA
Upstream 100 bases:
>100_bases AGCTCACAAATATGAACTAGCGTCAATTTTAGCTGCTTGCTTACTTTTAATAACCTTAATAAAGCTATTCTTATCCTTTT ACATAGTAAAAGGCGAATCA
Downstream 100 bases:
>100_bases AAAAATATATATTTCCTTAAGTTTTTATTCAATAATACTTGTAAAAATGTTTGAAAGACTTTCTTTTGCTACATTGTCAG ATGAACTTGTAATTTTTATT
Product: signal peptidase I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MIPIIFDKNWIVNHKFAYGLRLKSRQKYLLLWKTPKKNEMILIKDPITNKIAVKRIFAIPGEKFKQIEKNKICIHNLNFK IDENILKKNNKKIPDNHYLVIGENKQTSLDSRDYGFIKIDNILGKIIYYF
Sequences:
>Translated_130_residues MIPIIFDKNWIVNHKFAYGLRLKSRQKYLLLWKTPKKNEMILIKDPITNKIAVKRIFAIPGEKFKQIEKNKICIHNLNFK IDENILKKNNKKIPDNHYLVIGENKQTSLDSRDYGFIKIDNILGKIIYYF >Mature_130_residues MIPIIFDKNWIVNHKFAYGLRLKSRQKYLLLWKTPKKNEMILIKDPITNKIAVKRIFAIPGEKFKQIEKNKICIHNLNFK IDENILKKNNKKIPDNHYLVIGENKQTSLDSRDYGFIKIDNILGKIIYYF
Specific function: Unknown
COG id: COG0681
COG function: function code U; Signal peptidase I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.21.89
Molecular weight: Translated: 15521; Mature: 15521
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPIIFDKNWIVNHKFAYGLRLKSRQKYLLLWKTPKKNEMILIKDPITNKIAVKRIFAIP CCEEEECCCEEEECEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCEEEEEEEECC GEKFKQIEKNKICIHNLNFKIDENILKKNNKKIPDNHYLVIGENKQTSLDSRDYGFIKID CHHHHHHCCCCEEEEECCEEECCHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEH NILGKIIYYF HHHEEHEEEC >Mature Secondary Structure MIPIIFDKNWIVNHKFAYGLRLKSRQKYLLLWKTPKKNEMILIKDPITNKIAVKRIFAIP CCEEEECCCEEEECEEEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCEEEEEEEECC GEKFKQIEKNKICIHNLNFKIDENILKKNNKKIPDNHYLVIGENKQTSLDSRDYGFIKID CHHHHHHCCCCEEEEECCEEECCHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEH NILGKIIYYF HHHEEHEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA