| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598521
Identifier: 51598521
GI number: 51598521
Start: 272630
End: 274012
Strand: Direct
Name: 51598521
Synonym: BG0264
Alternate gene names: NA
Gene position: 272630-274012 (Clockwise)
Preceding gene: 51598516
Following gene: 51598523
Centisome position: 30.15
GC content: 25.23
Gene sequence:
>1383_bases GTGTTACCGCTATTTATAGTAATCTCTTCATTTATAGTATTTATTTTAGTATTTTTATTTTTTAAAATAGCATTAAAGCT TACAATAGGCAAAACTAGAGGGAAAATTAAAAAAGATGACGAAAGAACGCAAAAACTAATCGAAAGAGCAATTTCTCTAT TAAAAACAAATCCAAACGAAATAGGTGCCCTTGAAATTTTAAATAATTACTACTATAAAAATCAAGACCATGAGAATGGT ATAAAATATGCAAAAAAATTATGCCAATTAATAGAAGACAACCCAATAAGTCAAGAAATAAACACATTTAAAGCTTTTTT AAGCTATGGATTTTATAATCTTAAAAGAAATTTTAACAGAGAAGCCTTAGAATTTTTAAAAAAAGCATACCTCATAAAAA AAACAGATGAGGATGCAAATTATTATCTTGGTATAGCATTCTTAAAAAATGAAATGTATAAAGAAGCTCTATACTATCTT ACAAAAGTTTACAAGTTTAATAAAAATAATAAAGACATCCTAAAATACATAGGGATAACTTTATTTAACCTGGAAAGCTA TAGAAAAGCTGCTGGAATATTTAATAACATAAAAAAACACATACAAGGCGACATTGACGCTCTTTTAGCATATGCTAAGT CTTTGTCAAAAATGAATCAAGATCATCTGGCACTAGAGATTGCTAACAAAATAAAACAAAAAGACGGAATGATTTATGAG GCTTTATTAATTACATCTGAGATTCATTCAAAAAATAAAGAATTGGATAAATTAGAACAAAATATTAAAGAAATAATAAA AGTAAAACCTGACTTGCCTAAAAAAATTTTCCTTGAATTATTTTATAATCTTGGAGAACTCCAAATCTCTGTTGAAAATT ATCAAAAAGCTACAGAAGCTTTTACCAAAGTTGAAGATATTGATCCAAATTACAAAAAAATTAAAGAAAAATTAGAATTT AGTAAAAGATTAAACGAAAACATAGCGCTAAGAATATACTTGCGCAGTTCAAAAGAAAATTTTGGAAAAATAGCAAATGA AATTATTTTAAAACTATATTTAAATAAATTTCAAGTAAGAGATTCTAAAATAAACGAAATAACATCACAATTTATTGATA TGAACTTTCACTTAGCTAACAATCAATGGGAAGAAAATTTAATAGTACGATTTGTAAGAACCGAACAAGATACTTTTGGT GAATTATTCTTAAAAGATTTCATTTCAAAAATAAAAGAAAATAAAATAAAAGGACTCTGCATTGCTCCATCAAAATTCTC TTTAAAGGCTAAACAAATGATTGAAGGAAGGCTTATTGATCTAGTAGAAGGCAAAAAACTAACTCAAATACTTAAAAAAA TTAACATATCAAAATACACATAA
Upstream 100 bases:
>100_bases CAACTTACAAATTACTTTTATTTTAAGTAAATAAACTTTTCTTAAAAGTAGATATGATGATGCAAATTAATGGGATATTT TGAATTTAGGAGCAATAAAA
Downstream 100 bases:
>100_bases AAAATACTATCTTAAATATTTCATAGGATTTTCTGTTTTGCCATTCTTAAAAATTGTAAAATGCAAGTGATTACCTGTGC TATAGCCAGTACTTCCCATA
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Restriction Endonuclease
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MLPLFIVISSFIVFILVFLFFKIALKLTIGKTRGKIKKDDERTQKLIERAISLLKTNPNEIGALEILNNYYYKNQDHENG IKYAKKLCQLIEDNPISQEINTFKAFLSYGFYNLKRNFNREALEFLKKAYLIKKTDEDANYYLGIAFLKNEMYKEALYYL TKVYKFNKNNKDILKYIGITLFNLESYRKAAGIFNNIKKHIQGDIDALLAYAKSLSKMNQDHLALEIANKIKQKDGMIYE ALLITSEIHSKNKELDKLEQNIKEIIKVKPDLPKKIFLELFYNLGELQISVENYQKATEAFTKVEDIDPNYKKIKEKLEF SKRLNENIALRIYLRSSKENFGKIANEIILKLYLNKFQVRDSKINEITSQFIDMNFHLANNQWEENLIVRFVRTEQDTFG ELFLKDFISKIKENKIKGLCIAPSKFSLKAKQMIEGRLIDLVEGKKLTQILKKINISKYT
Sequences:
>Translated_460_residues MLPLFIVISSFIVFILVFLFFKIALKLTIGKTRGKIKKDDERTQKLIERAISLLKTNPNEIGALEILNNYYYKNQDHENG IKYAKKLCQLIEDNPISQEINTFKAFLSYGFYNLKRNFNREALEFLKKAYLIKKTDEDANYYLGIAFLKNEMYKEALYYL TKVYKFNKNNKDILKYIGITLFNLESYRKAAGIFNNIKKHIQGDIDALLAYAKSLSKMNQDHLALEIANKIKQKDGMIYE ALLITSEIHSKNKELDKLEQNIKEIIKVKPDLPKKIFLELFYNLGELQISVENYQKATEAFTKVEDIDPNYKKIKEKLEF SKRLNENIALRIYLRSSKENFGKIANEIILKLYLNKFQVRDSKINEITSQFIDMNFHLANNQWEENLIVRFVRTEQDTFG ELFLKDFISKIKENKIKGLCIAPSKFSLKAKQMIEGRLIDLVEGKKLTQILKKINISKYT >Mature_460_residues MLPLFIVISSFIVFILVFLFFKIALKLTIGKTRGKIKKDDERTQKLIERAISLLKTNPNEIGALEILNNYYYKNQDHENG IKYAKKLCQLIEDNPISQEINTFKAFLSYGFYNLKRNFNREALEFLKKAYLIKKTDEDANYYLGIAFLKNEMYKEALYYL TKVYKFNKNNKDILKYIGITLFNLESYRKAAGIFNNIKKHIQGDIDALLAYAKSLSKMNQDHLALEIANKIKQKDGMIYE ALLITSEIHSKNKELDKLEQNIKEIIKVKPDLPKKIFLELFYNLGELQISVENYQKATEAFTKVEDIDPNYKKIKEKLEF SKRLNENIALRIYLRSSKENFGKIANEIILKLYLNKFQVRDSKINEITSQFIDMNFHLANNQWEENLIVRFVRTEQDTFG ELFLKDFISKIKENKIKGLCIAPSKFSLKAKQMIEGRLIDLVEGKKLTQILKKINISKYT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53980; Mature: 53980
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLFIVISSFIVFILVFLFFKIALKLTIGKTRGKIKKDDERTQKLIERAISLLKTNPNE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH IGALEILNNYYYKNQDHENGIKYAKKLCQLIEDNPISQEINTFKAFLSYGFYNLKRNFNR HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCH EALEFLKKAYLIKKTDEDANYYLGIAFLKNEMYKEALYYLTKVYKFNKNNKDILKYIGIT HHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LFNLESYRKAAGIFNNIKKHIQGDIDALLAYAKSLSKMNQDHLALEIANKIKQKDGMIYE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH ALLITSEIHSKNKELDKLEQNIKEIIKVKPDLPKKIFLELFYNLGELQISVENYQKATEA HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHH FTKVEDIDPNYKKIKEKLEFSKRLNENIALRIYLRSSKENFGKIANEIILKLYLNKFQVR HHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHC DSKINEITSQFIDMNFHLANNQWEENLIVRFVRTEQDTFGELFLKDFISKIKENKIKGLC HHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEE IAPSKFSLKAKQMIEGRLIDLVEGKKLTQILKKINISKYT ECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MLPLFIVISSFIVFILVFLFFKIALKLTIGKTRGKIKKDDERTQKLIERAISLLKTNPNE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH IGALEILNNYYYKNQDHENGIKYAKKLCQLIEDNPISQEINTFKAFLSYGFYNLKRNFNR HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCH EALEFLKKAYLIKKTDEDANYYLGIAFLKNEMYKEALYYLTKVYKFNKNNKDILKYIGIT HHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LFNLESYRKAAGIFNNIKKHIQGDIDALLAYAKSLSKMNQDHLALEIANKIKQKDGMIYE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH ALLITSEIHSKNKELDKLEQNIKEIIKVKPDLPKKIFLELFYNLGELQISVENYQKATEA HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHH FTKVEDIDPNYKKIKEKLEFSKRLNENIALRIYLRSSKENFGKIANEIILKLYLNKFQVR HHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHC DSKINEITSQFIDMNFHLANNQWEENLIVRFVRTEQDTFGELFLKDFISKIKENKIKGLC HHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEE IAPSKFSLKAKQMIEGRLIDLVEGKKLTQILKKINISKYT ECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA