Definition Borrelia garinii PBi chromosome chromosome linear, complete sequence.
Accession NC_006156
Length 904,246

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The map label for this gene is fliW

Identifier: 51598444

GI number: 51598444

Start: 186147

End: 186539

Strand: Direct

Name: fliW

Synonym: BG0182

Alternate gene names: 51598444

Gene position: 186147-186539 (Clockwise)

Preceding gene: 51598443

Following gene: 51598445

Centisome position: 20.59

GC content: 27.23

Gene sequence:

>393_bases
ATGATAAATGAAAAAAGTATAGGATTTGATTTCCCTGAAGGTATACTTGGATTTGAAAACATTAAAAAATTTATAATAAA
AGACTCTAAATATAAGCCTTTTTCCATTATGCAATCCATCAATAAAGAAGTAAGCTTTTTAGTAACATCTCCTTTTAATT
TTTTAAGCGAATACTTGCCAAATATCCAGGAAAAAGATTGGTCAGACATTAAAGCAAAAGAAGAGGATGAAAGAGTTATC
CTATGTATAATCAATATGCATGTTAATGATTATAAAGACATTACAGCTAATCTGAAAGCACCAATCATAATAAACAAAAA
AAAATTACTTGGAAAACAAGCTATATGCACAAATGAAAAATACTCCCTACACCATAAAGTTTTCAAGGAATAA

Upstream 100 bases:

>100_bases
GCAATAACTAATTTAAATATGGCAAGCTTAGCCTATCAAGTATCTTTAGGAATCTCTGCTAAAATAATGCAGACAACTTT
ATTGGATTTTATAAAATAGA

Downstream 100 bases:

>100_bases
AGATGCTAGTATTATCAAGAAAAGTAAATGAAAGTATTAAAATAAACTCTGATATTGAAGTTTTAATATTAGAAATAAAA
AAGGATACTGTTAAAATAGC

Product: flagellar assembly protein FliW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MINEKSIGFDFPEGILGFENIKKFIIKDSKYKPFSIMQSINKEVSFLVTSPFNFLSEYLPNIQEKDWSDIKAKEEDERVI
LCIINMHVNDYKDITANLKAPIIINKKKLLGKQAICTNEKYSLHHKVFKE

Sequences:

>Translated_130_residues
MINEKSIGFDFPEGILGFENIKKFIIKDSKYKPFSIMQSINKEVSFLVTSPFNFLSEYLPNIQEKDWSDIKAKEEDERVI
LCIINMHVNDYKDITANLKAPIIINKKKLLGKQAICTNEKYSLHHKVFKE
>Mature_130_residues
MINEKSIGFDFPEGILGFENIKKFIIKDSKYKPFSIMQSINKEVSFLVTSPFNFLSEYLPNIQEKDWSDIKAKEEDERVI
LCIINMHVNDYKDITANLKAPIIINKKKLLGKQAICTNEKYSLHHKVFKE

Specific function: Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum

COG id: COG1699

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliW family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FLIW_BORGA (Q662I1)

Other databases:

- EMBL:   CP000013
- RefSeq:   YP_072632.1
- ProteinModelPortal:   Q662I1
- SMR:   Q662I1
- EnsemblBacteria:   EBBORT00000007967
- GeneID:   2957533
- GenomeReviews:   CP000013_GR
- KEGG:   bga:BG0182
- GeneTree:   EBGT00050000007419
- HOGENOM:   HBG498829
- OMA:   YLPNIEE
- ProtClustDB:   PRK13285
- BioCyc:   BGAR290434:BG0182-MONOMER
- GO:   GO:0005737
- GO:   GO:0019861
- HAMAP:   MF_01185
- InterPro:   IPR003775

Pfam domain/function: PF02623 FliW

EC number: NA

Molecular weight: Translated: 15172; Mature: 15172

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINEKSIGFDFPEGILGFENIKKFIIKDSKYKPFSIMQSINKEVSFLVTSPFNFLSEYLP
CCCCCCCCCCCCCHHCCHHHHHHHHHCCCCCCCHHHHHHHCHHEEEEEECCHHHHHHHCC
NIQEKDWSDIKAKEEDERVILCIINMHVNDYKDITANLKAPIIINKKKLLGKQAICTNEK
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHCCCCCCEEECHHHHHCCHHCCCCCC
YSLHHKVFKE
HHHHHHHHCC
>Mature Secondary Structure
MINEKSIGFDFPEGILGFENIKKFIIKDSKYKPFSIMQSINKEVSFLVTSPFNFLSEYLP
CCCCCCCCCCCCCHHCCHHHHHHHHHCCCCCCCHHHHHHHCHHEEEEEECCHHHHHHHCC
NIQEKDWSDIKAKEEDERVILCIINMHVNDYKDITANLKAPIIINKKKLLGKQAICTNEK
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHCCCCCCEEECHHHHHCCHHCCCCCC
YSLHHKVFKE
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA