| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is fliW
Identifier: 51598444
GI number: 51598444
Start: 186147
End: 186539
Strand: Direct
Name: fliW
Synonym: BG0182
Alternate gene names: 51598444
Gene position: 186147-186539 (Clockwise)
Preceding gene: 51598443
Following gene: 51598445
Centisome position: 20.59
GC content: 27.23
Gene sequence:
>393_bases ATGATAAATGAAAAAAGTATAGGATTTGATTTCCCTGAAGGTATACTTGGATTTGAAAACATTAAAAAATTTATAATAAA AGACTCTAAATATAAGCCTTTTTCCATTATGCAATCCATCAATAAAGAAGTAAGCTTTTTAGTAACATCTCCTTTTAATT TTTTAAGCGAATACTTGCCAAATATCCAGGAAAAAGATTGGTCAGACATTAAAGCAAAAGAAGAGGATGAAAGAGTTATC CTATGTATAATCAATATGCATGTTAATGATTATAAAGACATTACAGCTAATCTGAAAGCACCAATCATAATAAACAAAAA AAAATTACTTGGAAAACAAGCTATATGCACAAATGAAAAATACTCCCTACACCATAAAGTTTTCAAGGAATAA
Upstream 100 bases:
>100_bases GCAATAACTAATTTAAATATGGCAAGCTTAGCCTATCAAGTATCTTTAGGAATCTCTGCTAAAATAATGCAGACAACTTT ATTGGATTTTATAAAATAGA
Downstream 100 bases:
>100_bases AGATGCTAGTATTATCAAGAAAAGTAAATGAAAGTATTAAAATAAACTCTGATATTGAAGTTTTAATATTAGAAATAAAA AAGGATACTGTTAAAATAGC
Product: flagellar assembly protein FliW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MINEKSIGFDFPEGILGFENIKKFIIKDSKYKPFSIMQSINKEVSFLVTSPFNFLSEYLPNIQEKDWSDIKAKEEDERVI LCIINMHVNDYKDITANLKAPIIINKKKLLGKQAICTNEKYSLHHKVFKE
Sequences:
>Translated_130_residues MINEKSIGFDFPEGILGFENIKKFIIKDSKYKPFSIMQSINKEVSFLVTSPFNFLSEYLPNIQEKDWSDIKAKEEDERVI LCIINMHVNDYKDITANLKAPIIINKKKLLGKQAICTNEKYSLHHKVFKE >Mature_130_residues MINEKSIGFDFPEGILGFENIKKFIIKDSKYKPFSIMQSINKEVSFLVTSPFNFLSEYLPNIQEKDWSDIKAKEEDERVI LCIINMHVNDYKDITANLKAPIIINKKKLLGKQAICTNEKYSLHHKVFKE
Specific function: Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
COG id: COG1699
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliW family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FLIW_BORGA (Q662I1)
Other databases:
- EMBL: CP000013 - RefSeq: YP_072632.1 - ProteinModelPortal: Q662I1 - SMR: Q662I1 - EnsemblBacteria: EBBORT00000007967 - GeneID: 2957533 - GenomeReviews: CP000013_GR - KEGG: bga:BG0182 - GeneTree: EBGT00050000007419 - HOGENOM: HBG498829 - OMA: YLPNIEE - ProtClustDB: PRK13285 - BioCyc: BGAR290434:BG0182-MONOMER - GO: GO:0005737 - GO: GO:0019861 - HAMAP: MF_01185 - InterPro: IPR003775
Pfam domain/function: PF02623 FliW
EC number: NA
Molecular weight: Translated: 15172; Mature: 15172
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINEKSIGFDFPEGILGFENIKKFIIKDSKYKPFSIMQSINKEVSFLVTSPFNFLSEYLP CCCCCCCCCCCCCHHCCHHHHHHHHHCCCCCCCHHHHHHHCHHEEEEEECCHHHHHHHCC NIQEKDWSDIKAKEEDERVILCIINMHVNDYKDITANLKAPIIINKKKLLGKQAICTNEK CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHCCCCCCEEECHHHHHCCHHCCCCCC YSLHHKVFKE HHHHHHHHCC >Mature Secondary Structure MINEKSIGFDFPEGILGFENIKKFIIKDSKYKPFSIMQSINKEVSFLVTSPFNFLSEYLP CCCCCCCCCCCCCHHCCHHHHHHHHHCCCCCCCHHHHHHHCHHEEEEEECCHHHHHHHCC NIQEKDWSDIKAKEEDERVILCIINMHVNDYKDITANLKAPIIINKKKLLGKQAICTNEK CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHCCCCCCEEECHHHHHCCHHCCCCCC YSLHHKVFKE HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA