| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is flgL [C]
Identifier: 51598443
GI number: 51598443
Start: 184871
End: 186145
Strand: Direct
Name: flgL [C]
Synonym: BG0181
Alternate gene names: 51598443
Gene position: 184871-186145 (Clockwise)
Preceding gene: 51598442
Following gene: 51598444
Centisome position: 20.44
GC content: 32.86
Gene sequence:
>1275_bases ATGATAAATAGAGTAAGTCATCCATTAACATATGAAAATTTAAAAACCTCTGCAGCAGAGCAAGAATCTAAAATTACAAA ACTTTTAGAAAACTTATACAAAGGCGGTAAAAGGATTGTAAAACTAAGAAACGATCCAACAGGCGTTACTCACGCAATCA GGCTAGATAGCGACATATTTAAACTTAATGTATACATAAAAAATATTGGCACTTCTAAAGGCAACCTACGATATACAGAA GGATACTTACAATCTCTTACAAATATTTTAACACGAGCTAAAGAAATTGCCATTCAAGGAGCAAGCGGAACTTACGAAGC AGATGACAAAAAAATGATATCAAAAGAAGTGAATGCTTTACTAGAAGATGCTATTGCAATAGCAAACGCTAAAGGGCCTG ATGGGTACAGTATATTCTCAGGGACAAAAATTGATAGCGAAGCATTTAAAGTGACTAGAGAGAACAAAATAAGCAAAATA AGCAAAGACGGTGAAGGTCCTCAAATAATCAAAGTAGAATACACCGGAAACCAAGCTGAAAAGAAAACAGAAGTATACAA TGATGTGCATATATCAAATAATTATTCTGGGAATAAAATATTTTTCTTGCAAAACCAAAATATTATATCATCAATAAACA CTAATGGGTTTACCGTAAAAGAAAATACAAAAATTTATATTGACAATGTTGAAATAGGACTAACAACAGGAGATACTGCT CTTGATATTGTTGCTAAAATCAATGAGTCTTCAGCGCCTGTTGAAGCAAGCATTGATCCCGTTTTAAACTCATTGTCTAT TAAAACTACAACTCCACACCAAATTTGGATAACAGAAGCAAAAGAATCAAATGTTTTACAAACACTTGGAATACTTACTA AAAACAATGATACTAAACTACCTCCTTACAACCTTTCTAGCAGTACAGAAGTTAGAAGCAGATCTATTTTCGATGCGCTT ATTGAACTCAGAGACACGCTTTACAATAATAAAGAAGAGCTTGTTGGAAGTAGAAGTCTAGCAGAAATTGATGAAAGCTT AAAAAGATTACTTATATCTGTTGCGGATCTTGGAGCAAAAGAAAATAGACTTGATAGAAGTTATGAAAGAATAAGCAAAG AGGCTGCGGACATGAAAGAAGATATGGTCCAATACACCGATCTTGACGTAACAAAGGCAATAACTAATTTAAATATGGCA AGCTTAGCCTATCAAGTATCTTTAGGAATCTCTGCTAAAATAATGCAGACAACTTTATTGGATTTTATAAAATAG
Upstream 100 bases:
>100_bases ACATGATCGAATTTCAACAAGCCTTTATTGCAGCAAGTAAATTTATCACTGTTTCTGCCGAACTAATAGACACAATAATA AATAAAATGGGAGTATAAGC
Downstream 100 bases:
>100_bases AATGATAAATGAAAAAAGTATAGGATTTGATTTCCCTGAAGGTATACTTGGATTTGAAAACATTAAAAAATTTATAATAA AAGACTCTAAATATAAGCCT
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: Flagellin-Like Protein
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MINRVSHPLTYENLKTSAAEQESKITKLLENLYKGGKRIVKLRNDPTGVTHAIRLDSDIFKLNVYIKNIGTSKGNLRYTE GYLQSLTNILTRAKEIAIQGASGTYEADDKKMISKEVNALLEDAIAIANAKGPDGYSIFSGTKIDSEAFKVTRENKISKI SKDGEGPQIIKVEYTGNQAEKKTEVYNDVHISNNYSGNKIFFLQNQNIISSINTNGFTVKENTKIYIDNVEIGLTTGDTA LDIVAKINESSAPVEASIDPVLNSLSIKTTTPHQIWITEAKESNVLQTLGILTKNNDTKLPPYNLSSSTEVRSRSIFDAL IELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMVQYTDLDVTKAITNLNMA SLAYQVSLGISAKIMQTTLLDFIK
Sequences:
>Translated_424_residues MINRVSHPLTYENLKTSAAEQESKITKLLENLYKGGKRIVKLRNDPTGVTHAIRLDSDIFKLNVYIKNIGTSKGNLRYTE GYLQSLTNILTRAKEIAIQGASGTYEADDKKMISKEVNALLEDAIAIANAKGPDGYSIFSGTKIDSEAFKVTRENKISKI SKDGEGPQIIKVEYTGNQAEKKTEVYNDVHISNNYSGNKIFFLQNQNIISSINTNGFTVKENTKIYIDNVEIGLTTGDTA LDIVAKINESSAPVEASIDPVLNSLSIKTTTPHQIWITEAKESNVLQTLGILTKNNDTKLPPYNLSSSTEVRSRSIFDAL IELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMVQYTDLDVTKAITNLNMA SLAYQVSLGISAKIMQTTLLDFIK >Mature_424_residues MINRVSHPLTYENLKTSAAEQESKITKLLENLYKGGKRIVKLRNDPTGVTHAIRLDSDIFKLNVYIKNIGTSKGNLRYTE GYLQSLTNILTRAKEIAIQGASGTYEADDKKMISKEVNALLEDAIAIANAKGPDGYSIFSGTKIDSEAFKVTRENKISKI SKDGEGPQIIKVEYTGNQAEKKTEVYNDVHISNNYSGNKIFFLQNQNIISSINTNGFTVKENTKIYIDNVEIGLTTGDTA LDIVAKINESSAPVEASIDPVLNSLSIKTTTPHQIWITEAKESNVLQTLGILTKNNDTKLPPYNLSSSTEVRSRSIFDAL IELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAKENRLDRSYERISKEAADMKEDMVQYTDLDVTKAITNLNMA SLAYQVSLGISAKIMQTTLLDFIK
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47049; Mature: 47049
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINRVSHPLTYENLKTSAAEQESKITKLLENLYKGGKRIVKLRNDPTGVTHAIRLDSDIF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCEE KLNVYIKNIGTSKGNLRYTEGYLQSLTNILTRAKEIAIQGASGTYEADDKKMISKEVNAL EEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHH LEDAIAIANAKGPDGYSIFSGTKIDSEAFKVTRENKISKISKDGEGPQIIKVEYTGNQAE HHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHH KKTEVYNDVHISNNYSGNKIFFLQNQNIISSINTNGFTVKENTKIYIDNVEIGLTTGDTA HHHHHHCEEEECCCCCCCEEEEEECCCHHHHCCCCCEEEECCCEEEEEEEEEEEECCCHH LDIVAKINESSAPVEASIDPVLNSLSIKTTTPHQIWITEAKESNVLQTLGILTKNNDTKL HHHHHHCCCCCCCCCCCHHHHHHCCEEEECCCCEEEEEECCCCCHHHHHHHEECCCCCCC PPYNLSSSTEVRSRSIFDALIELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAK CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC ENRLDRSYERISKEAADMKEDMVQYTDLDVTKAITNLNMASLAYQVSLGISAKIMQTTLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHEEEEECCCCHHHHHHHHH DFIK HHHC >Mature Secondary Structure MINRVSHPLTYENLKTSAAEQESKITKLLENLYKGGKRIVKLRNDPTGVTHAIRLDSDIF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCEE KLNVYIKNIGTSKGNLRYTEGYLQSLTNILTRAKEIAIQGASGTYEADDKKMISKEVNAL EEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHH LEDAIAIANAKGPDGYSIFSGTKIDSEAFKVTRENKISKISKDGEGPQIIKVEYTGNQAE HHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHH KKTEVYNDVHISNNYSGNKIFFLQNQNIISSINTNGFTVKENTKIYIDNVEIGLTTGDTA HHHHHHCEEEECCCCCCCEEEEEECCCHHHHCCCCCEEEECCCEEEEEEEEEEEECCCHH LDIVAKINESSAPVEASIDPVLNSLSIKTTTPHQIWITEAKESNVLQTLGILTKNNDTKL HHHHHHCCCCCCCCCCCHHHHHHCCEEEECCCCEEEEEECCCCCHHHHHHHEECCCCCCC PPYNLSSSTEVRSRSIFDALIELRDTLYNNKEELVGSRSLAEIDESLKRLLISVADLGAK CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC ENRLDRSYERISKEAADMKEDMVQYTDLDVTKAITNLNMASLAYQVSLGISAKIMQTTLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHEEEEECCCCHHHHHHHHH DFIK HHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA