| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is flgK [H]
Identifier: 51598442
GI number: 51598442
Start: 182985
End: 184868
Strand: Direct
Name: flgK [H]
Synonym: BG0180
Alternate gene names: 51598442
Gene position: 182985-184868 (Clockwise)
Preceding gene: 51598441
Following gene: 51598443
Centisome position: 20.24
GC content: 31.85
Gene sequence:
>1884_bases GTGGATTCAACATTCTCAGGAATAGAAATTGGCAAAAGAAGTTTATTTGCACATAAAGATGCTATGAATACAGTTGGTCA TAATTTATCTAATGCTACAAAACCTGGATATTCAAGGCAAAGAGTAACAATGAAAACCGAAATTCCTCTTTATGCTCCGC AACTAAACAGAGCTAAAAAGCAAGGACAATTGGGTCAGGGAATAGTGGTTCAATCTATAGACAGAGTAAAAGATGAACTG CTTAATACAAGAATCGTTGAAGAATCACACCGACTAGGGTACTGGACTTCGCAAGACAAATTTATATCAATGTTAGAAGA TGTTTATAATGAGCCTGAAGATCAATCAATAAGAAAAAGATTAAATGATTTTTGGGAAAGTTGGCAAGATCTAGCAAATC AACCACAAGGTTTAGCAGAAAGAAAAATAATTCTAGAAAGAGGCAAGTCTTTTTGCGAATTAATAAGAAGTAGATTCCAT TCACTAGAAAGAATTTACATAATGGCAAACGATGAAATAAAAATTACAACAGATGAGGCAAACAATTACATTAAAAACAT TGCAAATCTTAATAAACAAATTTCAAAATCTCAAGCAATGAAAGACAATCCAAATGACTTAATGGATGCAAGAGATTTAA TGGTTGAAAAATTGGGCAATTTAATAAGTGTATCAATTGAAAACAAACAGGATCCCAATGAATTTTTAATTCACTCAGAA GGAAGACACCTTGTGCAAGGTTCAATTGCTAATGAGTTTAAACTAGAAGCTACAAACGGACCTACCAGAACCAAATGGAA CATTTTTTGGGCAAATAATGATAAAGCTAACCTTGAAACGGGAAAGCTTGGATCTTTGCTTAACATAAGAGATGAAGAGA TTAAAAATGAAATCAATGAACTAAATAATTTAGCTGCCAACATTATAGAGCTTGTTAACGAAATACATGAAACAGGACAT GGGATGGACAAAAAAAGTGGAAGAAGCTTTTTTTCTCAAGAGCTAAAACTAACTGATGAGCGCGGTCGATATGATACTAA CGGAAATGGCCAATTTGACTCCGTTCATATTTTCAAAATTAATAGCACAAATGAAATATTCCCAGAAGAGAAATTAGGAT TTTATGGAATTCTTAAATTTGAGGCTACTAATAGCAATGAGATTATAGAAATACCTTACAATGCTCCAGATACAGTTCAA GATCTGATAACTAGAATAAACAATTCAAATGCACAAGTTACAGCAAGAATTAACTCAGAAGGTAAGTTTGAAATCAAAGC AGTTAAAGAACAAGAAAATGAAAACATAACATTTAGAATTAAACATATAGAAGATTCTGGATTATTTCTTACAAAATATA CAGGAATATTAAATGAATCTGGACCTGAGGGAGCTTATGATTATAGAAATATTGACACAATAGACAAATTAACCCCTAAG TCCACTTATTCAATCTCGCCTCTAAAAAATCCTGCGGCATGGATAAAAGTTGCAGACATAATAGACTTAGATCCTTCAAA AATAGCAGCGGGAATTAATAGCCCAACAAATGAAATATCTATTGGAGATAACCAAGCAGCATTGAGAATCTCCTCTTTTG GAAATTCTCAGATTATGATTGGTAAAAATTTAACACTAAATGATTACTTTGCAAATACAGCATCAAATATAGCAATAAAA GGACAAATATCAGAAATCACAAAAGAAAGCCAATCTCAAATATTAAAAGATTTAACAGATCTAAGAATGTCTATTTCTGG AGTAAATAAAGATGAAGAACTTGCAAACATGATCGAATTTCAACAAGCCTTTATTGCAGCAAGTAAATTTATCACTGTTT CTGCCGAACTAATAGACACAATAATAAATAAAATGGGAGTATAA
Upstream 100 bases:
>100_bases GTGTAGAAAATGTAACTTACAAAAACCCTTACGGGCCAAAAATTGGAGGCTCAAAAGAAGCTTCCGTTTTAATAAATAAA AAACTTTAAAGGAGTTTAGA
Downstream 100 bases:
>100_bases GCATGATAAATAGAGTAAGTCATCCATTAACATATGAAAATTTAAAAACCTCTGCAGCAGAGCAAGAATCTAAAATTACA AAACTTTTAGAAAACTTATA
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 627; Mature: 627
Protein sequence:
>627_residues MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKKQGQLGQGIVVQSIDRVKDEL LNTRIVEESHRLGYWTSQDKFISMLEDVYNEPEDQSIRKRLNDFWESWQDLANQPQGLAERKIILERGKSFCELIRSRFH SLERIYIMANDEIKITTDEANNYIKNIANLNKQISKSQAMKDNPNDLMDARDLMVEKLGNLISVSIENKQDPNEFLIHSE GRHLVQGSIANEFKLEATNGPTRTKWNIFWANNDKANLETGKLGSLLNIRDEEIKNEINELNNLAANIIELVNEIHETGH GMDKKSGRSFFSQELKLTDERGRYDTNGNGQFDSVHIFKINSTNEIFPEEKLGFYGILKFEATNSNEIIEIPYNAPDTVQ DLITRINNSNAQVTARINSEGKFEIKAVKEQENENITFRIKHIEDSGLFLTKYTGILNESGPEGAYDYRNIDTIDKLTPK STYSISPLKNPAAWIKVADIIDLDPSKIAAGINSPTNEISIGDNQAALRISSFGNSQIMIGKNLTLNDYFANTASNIAIK GQISEITKESQSQILKDLTDLRMSISGVNKDEELANMIEFQQAFIAASKFITVSAELIDTIINKMGV
Sequences:
>Translated_627_residues MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKKQGQLGQGIVVQSIDRVKDEL LNTRIVEESHRLGYWTSQDKFISMLEDVYNEPEDQSIRKRLNDFWESWQDLANQPQGLAERKIILERGKSFCELIRSRFH SLERIYIMANDEIKITTDEANNYIKNIANLNKQISKSQAMKDNPNDLMDARDLMVEKLGNLISVSIENKQDPNEFLIHSE GRHLVQGSIANEFKLEATNGPTRTKWNIFWANNDKANLETGKLGSLLNIRDEEIKNEINELNNLAANIIELVNEIHETGH GMDKKSGRSFFSQELKLTDERGRYDTNGNGQFDSVHIFKINSTNEIFPEEKLGFYGILKFEATNSNEIIEIPYNAPDTVQ DLITRINNSNAQVTARINSEGKFEIKAVKEQENENITFRIKHIEDSGLFLTKYTGILNESGPEGAYDYRNIDTIDKLTPK STYSISPLKNPAAWIKVADIIDLDPSKIAAGINSPTNEISIGDNQAALRISSFGNSQIMIGKNLTLNDYFANTASNIAIK GQISEITKESQSQILKDLTDLRMSISGVNKDEELANMIEFQQAFIAASKFITVSAELIDTIINKMGV >Mature_627_residues MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKKQGQLGQGIVVQSIDRVKDEL LNTRIVEESHRLGYWTSQDKFISMLEDVYNEPEDQSIRKRLNDFWESWQDLANQPQGLAERKIILERGKSFCELIRSRFH SLERIYIMANDEIKITTDEANNYIKNIANLNKQISKSQAMKDNPNDLMDARDLMVEKLGNLISVSIENKQDPNEFLIHSE GRHLVQGSIANEFKLEATNGPTRTKWNIFWANNDKANLETGKLGSLLNIRDEEIKNEINELNNLAANIIELVNEIHETGH GMDKKSGRSFFSQELKLTDERGRYDTNGNGQFDSVHIFKINSTNEIFPEEKLGFYGILKFEATNSNEIIEIPYNAPDTVQ DLITRINNSNAQVTARINSEGKFEIKAVKEQENENITFRIKHIEDSGLFLTKYTGILNESGPEGAYDYRNIDTIDKLTPK STYSISPLKNPAAWIKVADIIDLDPSKIAAGINSPTNEISIGDNQAALRISSFGNSQIMIGKNLTLNDYFANTASNIAIK GQISEITKESQSQILKDLTDLRMSISGVNKDEELANMIEFQQAFIAASKFITVSAELIDTIINKMGV
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=329, Percent_Identity=25.2279635258359, Blast_Score=109, Evalue=4e-25,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR002371 - InterPro: IPR010810 [H]
Pfam domain/function: PF06429 DUF1078; PF07196 Flagellin_IN [H]
EC number: NA
Molecular weight: Translated: 70740; Mature: 70740
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKK CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEECCCHHHHHH QGQLGQGIVVQSIDRVKDELLNTRIVEESHRLGYWTSQDKFISMLEDVYNEPEDQSIRKR CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHCCCCHHHHHHH LNDFWESWQDLANQPQGLAERKIILERGKSFCELIRSRFHSLERIYIMANDEIKITTDEA HHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEEECCEEEEEECHH NNYIKNIANLNKQISKSQAMKDNPNDLMDARDLMVEKLGNLISVSIENKQDPNEFLIHSE HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECC GRHLVQGSIANEFKLEATNGPTRTKWNIFWANNDKANLETGKLGSLLNIRDEEIKNEINE CCEEEECCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH LNNLAANIIELVNEIHETGHGMDKKSGRSFFSQELKLTDERGRYDTNGNGQFDSVHIFKI HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEE NSTNEIFPEEKLGFYGILKFEATNSNEIIEIPYNAPDTVQDLITRINNSNAQVTARINSE CCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCC GKFEIKAVKEQENENITFRIKHIEDSGLFLTKYTGILNESGPEGAYDYRNIDTIDKLTPK CCEEEEEECCCCCCCEEEEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHCCCC STYSISPLKNPAAWIKVADIIDLDPSKIAAGINSPTNEISIGDNQAALRISSFGNSQIMI CCEECCCCCCCHHHEEEEHEECCCHHHHHHCCCCCCCEEEECCCCEEEEEECCCCCEEEE GKNLTLNDYFANTASNIAIKGQISEITKESQSQILKDLTDLRMSISGVNKDEELANMIEF ECCCEEHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH QQAFIAASKFITVSAELIDTIINKMGV HHHHHHHHHHEEEEHHHHHHHHHHHCC >Mature Secondary Structure MDSTFSGIEIGKRSLFAHKDAMNTVGHNLSNATKPGYSRQRVTMKTEIPLYAPQLNRAKK CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEECCCHHHHHH QGQLGQGIVVQSIDRVKDELLNTRIVEESHRLGYWTSQDKFISMLEDVYNEPEDQSIRKR CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHCCCCHHHHHHH LNDFWESWQDLANQPQGLAERKIILERGKSFCELIRSRFHSLERIYIMANDEIKITTDEA HHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCEEEEEEECCEEEEEECHH NNYIKNIANLNKQISKSQAMKDNPNDLMDARDLMVEKLGNLISVSIENKQDPNEFLIHSE HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECC GRHLVQGSIANEFKLEATNGPTRTKWNIFWANNDKANLETGKLGSLLNIRDEEIKNEINE CCEEEECCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH LNNLAANIIELVNEIHETGHGMDKKSGRSFFSQELKLTDERGRYDTNGNGQFDSVHIFKI HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEE NSTNEIFPEEKLGFYGILKFEATNSNEIIEIPYNAPDTVQDLITRINNSNAQVTARINSE CCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCC GKFEIKAVKEQENENITFRIKHIEDSGLFLTKYTGILNESGPEGAYDYRNIDTIDKLTPK CCEEEEEECCCCCCCEEEEEEEECCCCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHCCCC STYSISPLKNPAAWIKVADIIDLDPSKIAAGINSPTNEISIGDNQAALRISSFGNSQIMI CCEECCCCCCCHHHEEEEHEECCCHHHHHHCCCCCCCEEEECCCCEEEEEECCCCCEEEE GKNLTLNDYFANTASNIAIKGQISEITKESQSQILKDLTDLRMSISGVNKDEELANMIEF ECCCEEHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH QQAFIAASKFITVSAELIDTIINKMGV HHHHHHHHHHEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]