| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yjgA [C]
Identifier: 51597833
GI number: 51597833
Start: 4208960
End: 4209508
Strand: Direct
Name: yjgA [C]
Synonym: YPTB3542
Alternate gene names: 51597833
Gene position: 4208960-4209508 (Clockwise)
Preceding gene: 51597830
Following gene: 51597840
Centisome position: 88.71
GC content: 49.73
Gene sequence:
>549_bases ATGAACAAACAGCCCGAAGATTGGCTAGATGACGTCCCAGAAAATAAAAACGACGATGACGATGAGATTATCTGGGTCAG TAAAAGTGAAATTAAACGTGATGCCGAAGCGCTGAAAGACCTTGGCACCGAGCTGGTTGATCTGGGTAAAAATGCACTCG AGCGCATCCCATTGGATGAAGATCTGCTGGCCGCCATTGAACTGGCGCAGAAGATCAAAAAAGAAGGCCGCCGCCGCCAG ATCCAGTTGATTGGTAAAATGTTGCGCGCCCGCGATGTCGAGCCAATCCAGACCGCATTGGATAAACTGAAAAACCGCCA CAACCAGCAAGTCTCGCTGTTCCATAAACTGGAAACACTGCGTGACCGCCTGATCGCGGAAGGTGATGATGCGATCCCAA CGGTGCTAGAGCTGTACCCCGATGCAGACCGCCAACAATTACGCAGCCTGGTGCGTAACGCACAAAAAGAACAGGCCGCG AATAAGCCACCAAAATCATTCCGTCAGATTTTCTCGTATTTACGTGAACTGGCTGAAAAACAACAGTAA
Upstream 100 bases:
>100_bases TAAAGAACGCCATGGATCTGAGTCTAACAGAGATTTTTGTACAATTTCGCACAAAGCCTGGCAACCTGCTACGATTAGCC TCTTTTTAAGGAATTTGACC
Downstream 100 bases:
>100_bases TCGGGCGGGGCCGGGTCACTCCCGGCTCCCGACTCAATACTGTTGGCGGGCATAATCTATTCACAAAGTGATTTATTCAC AAAATGATTTATTCATCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MNKQPEDWLDDVPENKNDDDDEIIWVSKSEIKRDAEALKDLGTELVDLGKNALERIPLDEDLLAAIELAQKIKKEGRRRQ IQLIGKMLRARDVEPIQTALDKLKNRHNQQVSLFHKLETLRDRLIAEGDDAIPTVLELYPDADRQQLRSLVRNAQKEQAA NKPPKSFRQIFSYLRELAEKQQ
Sequences:
>Translated_182_residues MNKQPEDWLDDVPENKNDDDDEIIWVSKSEIKRDAEALKDLGTELVDLGKNALERIPLDEDLLAAIELAQKIKKEGRRRQ IQLIGKMLRARDVEPIQTALDKLKNRHNQQVSLFHKLETLRDRLIAEGDDAIPTVLELYPDADRQQLRSLVRNAQKEQAA NKPPKSFRQIFSYLRELAEKQQ >Mature_182_residues MNKQPEDWLDDVPENKNDDDDEIIWVSKSEIKRDAEALKDLGTELVDLGKNALERIPLDEDLLAAIELAQKIKKEGRRRQ IQLIGKMLRARDVEPIQTALDKLKNRHNQQVSLFHKLETLRDRLIAEGDDAIPTVLELYPDADRQQLRSLVRNAQKEQAA NKPPKSFRQIFSYLRELAEKQQ
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family [H]
Homologues:
Organism=Escherichia coli, GI1790681, Length=182, Percent_Identity=78.5714285714286, Blast_Score=263, Evalue=4e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023153 - InterPro: IPR006839 [H]
Pfam domain/function: PF04751 DUF615 [H]
EC number: NA
Molecular weight: Translated: 21128; Mature: 21128
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQPEDWLDDVPENKNDDDDEIIWVSKSEIKRDAEALKDLGTELVDLGKNALERIPLDE CCCCCHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH DLLAAIELAQKIKKEGRRRQIQLIGKMLRARDVEPIQTALDKLKNRHNQQVSLFHKLETL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RDRLIAEGDDAIPTVLELYPDADRQQLRSLVRNAQKEQAANKPPKSFRQIFSYLRELAEK HHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QQ CC >Mature Secondary Structure MNKQPEDWLDDVPENKNDDDDEIIWVSKSEIKRDAEALKDLGTELVDLGKNALERIPLDE CCCCCHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH DLLAAIELAQKIKKEGRRRQIQLIGKMLRARDVEPIQTALDKLKNRHNQQVSLFHKLETL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RDRLIAEGDDAIPTVLELYPDADRQQLRSLVRNAQKEQAANKPPKSFRQIFSYLRELAEK HHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA