Click here to switch to the map view.

The map label for this gene is 51596205

Identifier: 51596205

GI number: 51596205

Start: 2215440

End: 2215808

Strand: Direct

Name: 51596205

Synonym: YPTB1870

Alternate gene names: NA

Gene position: 2215440-2215808 (Clockwise)

Preceding gene: 51596195

Following gene: 51596206

Centisome position: 46.69

GC content: 45.26

Gene sequence:

>369_bases
ATGCCAAACAAAAAAGAGGAATTATTATTCCTAATTGGCGCACGACTGCGTGAAGAAAGGGAAAAAACGGGTGAAAGCCA
AGAGGCTATGGCGACAAATTTTGGTGTTTCAACCAGAACTTGGGGCAAATATGAGAGAGGGGAAACCGTACCTGATGCTG
CCACACTCGCATTGTTGAATGCTCAGTATGGTTTAGACGTCATGTATATACTGACGGGGAAACGAACCCCTCCAGATACT
ATCTCTACAGAAGAGCTGAAACTAGTAGAGAATTACCGAGCAATGGATGACTCGGCAAGGCTAAATATACAGGCGGTTGG
CGATGCGTTCGCGCAATCGAAGCCTCAATTGAAGTCGAACAATAACTAG

Upstream 100 bases:

>100_bases
TCGGTAATCGCGAGCGTTGATCGTGTTTGACTTGTTTCATAATGGTATATTGTGATCCACTAAGTTCCTGTACAACACAA
TTTAAGGAAGTATTGTTCCC

Downstream 100 bases:

>100_bases
TAATATGGGAGGTTGAGTTAATGGAAATCGTACTTATTGTTCTTATTGTTTTAGGGGTGGTTAGTCCATATCTGTTTTAT
TTGATAATAAAAAAACAGAA

Product: prophage transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MPNKKEELLFLIGARLREEREKTGESQEAMATNFGVSTRTWGKYERGETVPDAATLALLNAQYGLDVMYILTGKRTPPDT
ISTEELKLVENYRAMDDSARLNIQAVGDAFAQSKPQLKSNNN

Sequences:

>Translated_122_residues
MPNKKEELLFLIGARLREEREKTGESQEAMATNFGVSTRTWGKYERGETVPDAATLALLNAQYGLDVMYILTGKRTPPDT
ISTEELKLVENYRAMDDSARLNIQAVGDAFAQSKPQLKSNNN
>Mature_121_residues
PNKKEELLFLIGARLREEREKTGESQEAMATNFGVSTRTWGKYERGETVPDAATLALLNAQYGLDVMYILTGKRTPPDTI
STEELKLVENYRAMDDSARLNIQAVGDAFAQSKPQLKSNNN

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13640; Mature: 13508

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNKKEELLFLIGARLREEREKTGESQEAMATNFGVSTRTWGKYERGETVPDAATLALLN
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHC
AQYGLDVMYILTGKRTPPDTISTEELKLVENYRAMDDSARLNIQAVGDAFAQSKPQLKSN
CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCCCCCC
NN
CC
>Mature Secondary Structure 
PNKKEELLFLIGARLREEREKTGESQEAMATNFGVSTRTWGKYERGETVPDAATLALLN
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHC
AQYGLDVMYILTGKRTPPDTISTEELKLVENYRAMDDSARLNIQAVGDAFAQSKPQLKSN
CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCCCCCC
NN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA