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The map label for this gene is 51596195

Identifier: 51596195

GI number: 51596195

Start: 2206460

End: 2207452

Strand: Direct

Name: 51596195

Synonym: YPTB1860

Alternate gene names: NA

Gene position: 2206460-2207452 (Clockwise)

Preceding gene: 51596194

Following gene: 51596205

Centisome position: 46.5

GC content: 50.76

Gene sequence:

>993_bases
ATGGCGGGCAATAGTACCGCACAGGCTGAGGCGTTTACTTTTGACGACCCGATCCCAATGATGGATCGGCGCGATATTCT
GGATTATTTGGAATGTGCCGTGATGGATCGCTGGTATGAGCCGCCGGTGTCATTCAACGGTCTGGCTAAGTCATTTCGTG
CGGCGGTGCATCACAGCTCGCCTATCTACATGAAACGTAATGTACTGGTTAGCCTGTTTGAGCCGCACCGGCTGCTATCA
AAACAGGACTTTAGCCGCTATGCGCTGGATTTTTTGGTATTCGCTAATTCGTTTTTAGAGGCCCGCTATAACCGGCTGGG
CGGCATCATGAAACTGGTACCCAGCCCAGCAAAATACACCCGCCGCGGCGTGGAGGCGGACACCTATTGGTATGTCTCAT
CCTATGCCAACCCACACCCGTTTGAAGCCAATAGCGTTTTTCACCTGCTAGACCCGGATATTAATCAGGAGATCTACGGC
GTTCCTGAATATCTCGCCTCGCTAAACTCGACCTGGCTTAATGAAGCAGCCACTTTGTTCCGCCGTAAATATTATCTGAA
TGGCAGTCACGCTGGATTTATTCTGTATATGAACGACGCCGCCCATAAACAGGAGGATATCGACGCCTTACGTAAGGCGC
TGAAAGAATCCAAAGGGCCGGGCAATTTCCGCAATTTGTTTATGTATGCCCCGGCCGGTAAAAAGGACGGCATACAGGTG
ATCCCACTTGCAGAGGTTGCCGCCAAGGATGAATTTGCCAGCATTAAGAACGTCACCCGCGACGACCAGCTCGCTATGCA
ACGGGTGCCACCTCAACTGATGGGGATTTTACCCAATAACACCGGCGGTTTTGGTGATGTAGAAAAAGCCGCGCGGGTGT
TTGCCATTAACGAACTGGCCCCCTTGCAAGAACGGCTGATGGAAATAAATGATTGGGTTGGGGAGGAAGTTGTCAGATTT
AAGCCGTATGAATTACTTGCCAAACAAGAGTAA

Upstream 100 bases:

>100_bases
AGCCTCTTGAGGGCATTAACAGCAATAACACCAGTGTGATGGAGATATATTGATGAGTAAACGCAACAGGAAAACCCGCT
CGGCCAAGGTGACAACAGCT

Downstream 100 bases:

>100_bases
ATCCAACTTATGCATATGCTAACCGTCTTTTAGGCGGTTTTTGCATTTATATGCACATGAAAATTAACTGGCCGCCACTT
TATTTCTTATATTGAGAATT

Product: capsid portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MAGNSTAQAEAFTFDDPIPMMDRRDILDYLECAVMDRWYEPPVSFNGLAKSFRAAVHHSSPIYMKRNVLVSLFEPHRLLS
KQDFSRYALDFLVFANSFLEARYNRLGGIMKLVPSPAKYTRRGVEADTYWYVSSYANPHPFEANSVFHLLDPDINQEIYG
VPEYLASLNSTWLNEAATLFRRKYYLNGSHAGFILYMNDAAHKQEDIDALRKALKESKGPGNFRNLFMYAPAGKKDGIQV
IPLAEVAAKDEFASIKNVTRDDQLAMQRVPPQLMGILPNNTGGFGDVEKAARVFAINELAPLQERLMEINDWVGEEVVRF
KPYELLAKQE

Sequences:

>Translated_330_residues
MAGNSTAQAEAFTFDDPIPMMDRRDILDYLECAVMDRWYEPPVSFNGLAKSFRAAVHHSSPIYMKRNVLVSLFEPHRLLS
KQDFSRYALDFLVFANSFLEARYNRLGGIMKLVPSPAKYTRRGVEADTYWYVSSYANPHPFEANSVFHLLDPDINQEIYG
VPEYLASLNSTWLNEAATLFRRKYYLNGSHAGFILYMNDAAHKQEDIDALRKALKESKGPGNFRNLFMYAPAGKKDGIQV
IPLAEVAAKDEFASIKNVTRDDQLAMQRVPPQLMGILPNNTGGFGDVEKAARVFAINELAPLQERLMEINDWVGEEVVRF
KPYELLAKQE
>Mature_329_residues
AGNSTAQAEAFTFDDPIPMMDRRDILDYLECAVMDRWYEPPVSFNGLAKSFRAAVHHSSPIYMKRNVLVSLFEPHRLLSK
QDFSRYALDFLVFANSFLEARYNRLGGIMKLVPSPAKYTRRGVEADTYWYVSSYANPHPFEANSVFHLLDPDINQEIYGV
PEYLASLNSTWLNEAATLFRRKYYLNGSHAGFILYMNDAAHKQEDIDALRKALKESKGPGNFRNLFMYAPAGKKDGIQVI
PLAEVAAKDEFASIKNVTRDDQLAMQRVPPQLMGILPNNTGGFGDVEKAARVFAINELAPLQERLMEINDWVGEEVVRFK
PYELLAKQE

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 37535; Mature: 37404

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGNSTAQAEAFTFDDPIPMMDRRDILDYLECAVMDRWYEPPVSFNGLAKSFRAAVHHSS
CCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
PIYMKRNVLVSLFEPHRLLSKQDFSRYALDFLVFANSFLEARYNRLGGIMKLVPSPAKYT
CEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RRGVEADTYWYVSSYANPHPFEANSVFHLLDPDINQEIYGVPEYLASLNSTWLNEAATLF
HCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHH
RRKYYLNGSHAGFILYMNDAAHKQEDIDALRKALKESKGPGNFRNLFMYAPAGKKDGIQV
HHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEE
IPLAEVAAKDEFASIKNVTRDDQLAMQRVPPQLMGILPNNTGGFGDVEKAARVFAINELA
EEHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHH
PLQERLMEINDWVGEEVVRFKPYELLAKQE
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure 
AGNSTAQAEAFTFDDPIPMMDRRDILDYLECAVMDRWYEPPVSFNGLAKSFRAAVHHSS
CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
PIYMKRNVLVSLFEPHRLLSKQDFSRYALDFLVFANSFLEARYNRLGGIMKLVPSPAKYT
CEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RRGVEADTYWYVSSYANPHPFEANSVFHLLDPDINQEIYGVPEYLASLNSTWLNEAATLF
HCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHH
RRKYYLNGSHAGFILYMNDAAHKQEDIDALRKALKESKGPGNFRNLFMYAPAGKKDGIQV
HHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEE
IPLAEVAAKDEFASIKNVTRDDQLAMQRVPPQLMGILPNNTGGFGDVEKAARVFAINELA
EEHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHH
PLQERLMEINDWVGEEVVRFKPYELLAKQE
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]