| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is yicI [C]
Identifier: 50843767
GI number: 50843767
Start: 2534866
End: 2537358
Strand: Direct
Name: yicI [C]
Synonym: PPA2332
Alternate gene names: 50843767
Gene position: 2534866-2537358 (Clockwise)
Preceding gene: 50843766
Following gene: 50843768
Centisome position: 99.01
GC content: 61.29
Gene sequence:
>2493_bases ATGGACACGCTCATGCGGATCACCGACCACTTGACAACCTCGCCGGGTATCCAATTGAAAATTGACAAGCGATGGGGTGC CTCCGTCACATTTGTGACGCGTTCCATCGCCCACGTGCGAATTTTCGACGCCGCCGATCCGCAGCTCGACCGGACCTGGA GCATCAGCCTCGGTTCCAACGCCACCCCGCGGACCGGACTGGGGCCCCGTGACCTCCTCGACCATTCCCCTGCCCCGGCA TGGGCGGGCAATTCTCGCGATGTCGCGCCCGTCGAGGACATGGAGGTGACGACAACTGTCACCGCCAGCGCCGAAGACAC TGCTAGTCACCCGGAGTTTTCCGGGGTTTACGCTGACGAACCGGTCGATTCCCCTGACCCAGACGAGAAGTCCTTCATCG TTGGCACCGATTCGCTGCGAGTCATCATCCGCGACTGCCCATTACGGATGACCTGGCAGCGCCGGGCTGACGACTGGGTC ACCGTCAGCGAAGATCGCCCCACCGGGGCCTATGAAATCGGGACTCACACCGGGCGGGTCGCCCACCACAGAGTCCGCAA CATCGACGACCGTTACTACGGCCTCGGTGAGAAATCGGGCGACCTGGAGCGCACCGGACGTATCTTCGACATGAGGTGCC TGGACGCCCTGGGATATGACGCCGGCAGCACCGACCCCCTGTACAAACACGTGCCTTTCCTCATGACCCGCACCGCCAAC GGTGCCTTCGGGATCTTCTATGACAACCTGTCGGCATCGCGATTCAATCTGGGAGCCGAAGTCGACAACTACCACCGTCC TTTCACCTCGTGGCAAGCCGACCACGGCGACATCGACTATTGGGTCATGACAGCCGACCACCTCTGCGACCTCACCCCGC AGATCTTGCGTCTCACCGGCAACCCGGCCTTTCTACCGCGCTGGGCGCTGGGCTACTCGGGCTCGACAATGCACTACACC GACGCCCCCGACGCCTCCTGCCAGTTGCTGAAGTTCATCGACCTGTTGCGCGAGCATGCGATCCCGTGCGACTCCTTTCA ACTCTCGTCGGGCTACACCACCATCGGCTCGCGCCGTTACGTCTTTACCTGGGACCGTGACAAATTTTCCCAGCCCACCG ACACTACGAGGCACTTTCGTGACGCCGGCCTCCACCTGGCGGCAAATATCAAACCAGCCCTACTGACGACGCACCCCTAT TACCGCGATGTGGCAGAGGCGGGGATTTTTGTCACCAACTCCCGGACTGGGGAACCGGCGACGTCGATGTTCTGGGGCGG TCACGGCAGCAACGTCGACTTCACCAACCCGCGCGGAGTGCAGTGGTGGAAAGACAACGTCCGCCACCAGCTCATCGACA TGGGCATCGAATCCACCTGGAACGACAACAACGAGTACGAATTGTGGTCAGAGGACGCCATTTGTGACGGTTTTGGTCAC CCTGTCGAGCTGGACCGCATTCGCCCAGTGCAGGCCCTTCTCATGAGCCGCGCCTCCTTTGAAGCCCAACGCGAGGCTGC CCCTGTCGAACGCCCCTTCCTTATTTCTCGGTCTGGGCCGCTAGGTCTGCAGCGCTACGTCCAGACCTGGAGTGGTGACA ATTCCACCTCTTGGCGCACCCTGAAGTACAACACCCGGATGGGTGTAGGGATGAGCATGTCTGGGCTAGTGAATTTCGGC CACGACGTCGGCGGATTCGCCGGTACCGCCCGACCCGGCCCGGAGCTTTTTGCCCGCTGGGTGGCCAACGGCGTAATGCA TCCGCGCTTCACGATCCATTCCTGGCACAACGATGGTTCGGTCAATGAACCCTGGATGTACCCCGAGATCACCGACATCG TCCGGGAGATGATCCGGCTGCGCTACCGCCTCATCCCATTCCTGTACACCCTGTCATATCTGGCGGCGGAGCGACGCGAA CCCATCGTCAACCCGGTGTTCAGCCTCGACGACACGCTTCATGAGGAGTCCGATGATTTCCTACTCGGCCACGACCTGTT GGTGGCATCCGTCGTCGAAAAGGGCCAAACCACTCGAACCGTCACCCTCCCTCACGTCTCCGACGGCTGGTTTGAGTTCG ACACCGGCGTCCATCATGACCCAGGCACCGTCACCCTCGAGGCCCCACTAGACCGCCTGCCACTGCTGGTGCGCGCTGGG GCAGGGATCCCACAGTGTGAGTTGCCCGCGCCTTCGGGGGAAATCATCACCACGCGGACGGTCGAAAACTCCCCACACAG GATCGTTCTCTACCTTCCTGACGGTAACGGCCATTCGCAGGGATTTTTCTTCGACGACGATGGCCATACCAATGGTTACC GCCAGGGCCATGGGTACTGGCTCACCTGGTCCGCCGATCACACCGACACCACGGTGATAGTTCATACTCATGTCGAAGGT GACTACCAACCGTCATGGGGAACTATGGCTTTCGCTCTTCGCCCAGGAGATGACCGCGCCATCAAGGTCGTAGCCGACGC CGCCCAGGACTAG
Upstream 100 bases:
>100_bases CCGCTCACCCGCGACAAGGTGGTCGCCAACGCCGACGAGTTGGCTCGTCGCCACGCAGTACAGGCCGAGCAAAACTCCTG ACCCATAACGGAGGCACATC
Downstream 100 bases:
>100_bases AAACCAAACGCCACAACCGGAAGGAGATCATGATGCTGCGACCACAGGACACCGCCACCCGGGACACGAAGTGTCTGTCG GGGATGTGGGACTTTGCCTT
Product: putative glucosidase
Products: NA
Alternate protein names: Alpha-glucosidase II [H]
Number of amino acids: Translated: 830; Mature: 830
Protein sequence:
>830_residues MDTLMRITDHLTTSPGIQLKIDKRWGASVTFVTRSIAHVRIFDAADPQLDRTWSISLGSNATPRTGLGPRDLLDHSPAPA WAGNSRDVAPVEDMEVTTTVTASAEDTASHPEFSGVYADEPVDSPDPDEKSFIVGTDSLRVIIRDCPLRMTWQRRADDWV TVSEDRPTGAYEIGTHTGRVAHHRVRNIDDRYYGLGEKSGDLERTGRIFDMRCLDALGYDAGSTDPLYKHVPFLMTRTAN GAFGIFYDNLSASRFNLGAEVDNYHRPFTSWQADHGDIDYWVMTADHLCDLTPQILRLTGNPAFLPRWALGYSGSTMHYT DAPDASCQLLKFIDLLREHAIPCDSFQLSSGYTTIGSRRYVFTWDRDKFSQPTDTTRHFRDAGLHLAANIKPALLTTHPY YRDVAEAGIFVTNSRTGEPATSMFWGGHGSNVDFTNPRGVQWWKDNVRHQLIDMGIESTWNDNNEYELWSEDAICDGFGH PVELDRIRPVQALLMSRASFEAQREAAPVERPFLISRSGPLGLQRYVQTWSGDNSTSWRTLKYNTRMGVGMSMSGLVNFG HDVGGFAGTARPGPELFARWVANGVMHPRFTIHSWHNDGSVNEPWMYPEITDIVREMIRLRYRLIPFLYTLSYLAAERRE PIVNPVFSLDDTLHEESDDFLLGHDLLVASVVEKGQTTRTVTLPHVSDGWFEFDTGVHHDPGTVTLEAPLDRLPLLVRAG AGIPQCELPAPSGEIITTRTVENSPHRIVLYLPDGNGHSQGFFFDDDGHTNGYRQGHGYWLTWSADHTDTTVIVHTHVEG DYQPSWGTMAFALRPGDDRAIKVVADAAQD
Sequences:
>Translated_830_residues MDTLMRITDHLTTSPGIQLKIDKRWGASVTFVTRSIAHVRIFDAADPQLDRTWSISLGSNATPRTGLGPRDLLDHSPAPA WAGNSRDVAPVEDMEVTTTVTASAEDTASHPEFSGVYADEPVDSPDPDEKSFIVGTDSLRVIIRDCPLRMTWQRRADDWV TVSEDRPTGAYEIGTHTGRVAHHRVRNIDDRYYGLGEKSGDLERTGRIFDMRCLDALGYDAGSTDPLYKHVPFLMTRTAN GAFGIFYDNLSASRFNLGAEVDNYHRPFTSWQADHGDIDYWVMTADHLCDLTPQILRLTGNPAFLPRWALGYSGSTMHYT DAPDASCQLLKFIDLLREHAIPCDSFQLSSGYTTIGSRRYVFTWDRDKFSQPTDTTRHFRDAGLHLAANIKPALLTTHPY YRDVAEAGIFVTNSRTGEPATSMFWGGHGSNVDFTNPRGVQWWKDNVRHQLIDMGIESTWNDNNEYELWSEDAICDGFGH PVELDRIRPVQALLMSRASFEAQREAAPVERPFLISRSGPLGLQRYVQTWSGDNSTSWRTLKYNTRMGVGMSMSGLVNFG HDVGGFAGTARPGPELFARWVANGVMHPRFTIHSWHNDGSVNEPWMYPEITDIVREMIRLRYRLIPFLYTLSYLAAERRE PIVNPVFSLDDTLHEESDDFLLGHDLLVASVVEKGQTTRTVTLPHVSDGWFEFDTGVHHDPGTVTLEAPLDRLPLLVRAG AGIPQCELPAPSGEIITTRTVENSPHRIVLYLPDGNGHSQGFFFDDDGHTNGYRQGHGYWLTWSADHTDTTVIVHTHVEG DYQPSWGTMAFALRPGDDRAIKVVADAAQD >Mature_830_residues MDTLMRITDHLTTSPGIQLKIDKRWGASVTFVTRSIAHVRIFDAADPQLDRTWSISLGSNATPRTGLGPRDLLDHSPAPA WAGNSRDVAPVEDMEVTTTVTASAEDTASHPEFSGVYADEPVDSPDPDEKSFIVGTDSLRVIIRDCPLRMTWQRRADDWV TVSEDRPTGAYEIGTHTGRVAHHRVRNIDDRYYGLGEKSGDLERTGRIFDMRCLDALGYDAGSTDPLYKHVPFLMTRTAN GAFGIFYDNLSASRFNLGAEVDNYHRPFTSWQADHGDIDYWVMTADHLCDLTPQILRLTGNPAFLPRWALGYSGSTMHYT DAPDASCQLLKFIDLLREHAIPCDSFQLSSGYTTIGSRRYVFTWDRDKFSQPTDTTRHFRDAGLHLAANIKPALLTTHPY YRDVAEAGIFVTNSRTGEPATSMFWGGHGSNVDFTNPRGVQWWKDNVRHQLIDMGIESTWNDNNEYELWSEDAICDGFGH PVELDRIRPVQALLMSRASFEAQREAAPVERPFLISRSGPLGLQRYVQTWSGDNSTSWRTLKYNTRMGVGMSMSGLVNFG HDVGGFAGTARPGPELFARWVANGVMHPRFTIHSWHNDGSVNEPWMYPEITDIVREMIRLRYRLIPFLYTLSYLAAERRE PIVNPVFSLDDTLHEESDDFLLGHDLLVASVVEKGQTTRTVTLPHVSDGWFEFDTGVHHDPGTVTLEAPLDRLPLLVRAG AGIPQCELPAPSGEIITTRTVENSPHRIVLYLPDGNGHSQGFFFDDDGHTNGYRQGHGYWLTWSADHTDTTVIVHTHVEG DYQPSWGTMAFALRPGDDRAIKVVADAAQD
Specific function: Unknown
COG id: COG1501
COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 31 family [H]
Homologues:
Organism=Homo sapiens, GI66346737, Length=601, Percent_Identity=29.2845257903494, Blast_Score=216, Evalue=8e-56, Organism=Homo sapiens, GI38202257, Length=696, Percent_Identity=27.5862068965517, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI88900491, Length=696, Percent_Identity=27.5862068965517, Blast_Score=215, Evalue=2e-55, Organism=Homo sapiens, GI157364974, Length=674, Percent_Identity=25.2225519287834, Blast_Score=146, Evalue=6e-35, Organism=Homo sapiens, GI119393895, Length=601, Percent_Identity=26.6222961730449, Blast_Score=134, Evalue=4e-31, Organism=Homo sapiens, GI119393893, Length=601, Percent_Identity=26.6222961730449, Blast_Score=134, Evalue=4e-31, Organism=Homo sapiens, GI119393891, Length=601, Percent_Identity=26.6222961730449, Blast_Score=134, Evalue=4e-31, Organism=Homo sapiens, GI221316699, Length=580, Percent_Identity=23.6206896551724, Blast_Score=130, Evalue=6e-30, Organism=Homo sapiens, GI310115361, Length=547, Percent_Identity=23.5831809872029, Blast_Score=95, Evalue=3e-19, Organism=Escherichia coli, GI2367256, Length=495, Percent_Identity=24.8484848484848, Blast_Score=145, Evalue=1e-35, Organism=Escherichia coli, GI2367323, Length=458, Percent_Identity=24.6724890829694, Blast_Score=115, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17560798, Length=633, Percent_Identity=27.0142180094787, Blast_Score=207, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17560800, Length=632, Percent_Identity=26.7405063291139, Blast_Score=207, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71991189, Length=665, Percent_Identity=27.5187969924812, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI32563849, Length=318, Percent_Identity=27.3584905660377, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71985706, Length=278, Percent_Identity=27.6978417266187, Blast_Score=90, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6319706, Length=594, Percent_Identity=27.6094276094276, Blast_Score=194, Evalue=4e-50, Organism=Drosophila melanogaster, GI24643749, Length=652, Percent_Identity=25.3067484662577, Blast_Score=192, Evalue=9e-49, Organism=Drosophila melanogaster, GI24643753, Length=652, Percent_Identity=25.3067484662577, Blast_Score=192, Evalue=9e-49, Organism=Drosophila melanogaster, GI24643751, Length=652, Percent_Identity=25.3067484662577, Blast_Score=192, Evalue=9e-49, Organism=Drosophila melanogaster, GI24643746, Length=652, Percent_Identity=25.3067484662577, Blast_Score=192, Evalue=9e-49, Organism=Drosophila melanogaster, GI21357605, Length=652, Percent_Identity=25.3067484662577, Blast_Score=192, Evalue=9e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011013 - InterPro: IPR000322 - InterPro: IPR017853 [H]
Pfam domain/function: PF01055 Glyco_hydro_31 [H]
EC number: =3.2.1.20 [H]
Molecular weight: Translated: 93056; Mature: 93056
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTLMRITDHLTTSPGIQLKIDKRWGASVTFVTRSIAHVRIFDAADPQLDRTWSISLGSN CCHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCEEEEEEEECCCCCCCCEEEEEECCC ATPRTGLGPRDLLDHSPAPAWAGNSRDVAPVEDMEVTTTVTASAEDTASHPEFSGVYADE CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEECCC PVDSPDPDEKSFIVGTDSLRVIIRDCPLRMTWQRRADDWVTVSEDRPTGAYEIGTHTGRV CCCCCCCCCCEEEEECCCEEEEEECCCCCEEECCCCCCCEEEECCCCCCCEEECCCCCHH AHHRVRNIDDRYYGLGEKSGDLERTGRIFDMRCLDALGYDAGSTDPLYKHVPFLMTRTAN HHHHHHCCCHHHCCCCCCCCCHHHCCCEEEHHHHHHHCCCCCCCCHHHHHCCEEEEECCC GAFGIFYDNLSASRFNLGAEVDNYHRPFTSWQADHGDIDYWVMTADHLCDLTPQILRLTG CEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCHHHEEECC NPAFLPRWALGYSGSTMHYTDAPDASCQLLKFIDLLREHAIPCDSFQLSSGYTTIGSRRY CCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEECCCEEE VFTWDRDKFSQPTDTTRHFRDAGLHLAANIKPALLTTHPYYRDVAEAGIFVTNSRTGEPA EEEECCCCCCCCCCHHHHHHHCCEEEEECCCCEEEECCCHHHHHHHCCEEEECCCCCCCC TSMFWGGHGSNVDFTNPRGVQWWKDNVRHQLIDMGIESTWNDNNEYELWSEDAICDGFGH HHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCC PVELDRIRPVQALLMSRASFEAQREAAPVERPFLISRSGPLGLQRYVQTWSGDNSTSWRT CEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEE LKYNTRMGVGMSMSGLVNFGHDVGGFAGTARPGPELFARWVANGVMHPRFTIHSWHNDGS EEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCC VNEPWMYPEITDIVREMIRLRYRLIPFLYTLSYLAAERREPIVNPVFSLDDTLHEESDDF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHCCCCCE LLGHDLLVASVVEKGQTTRTVTLPHVSDGWFEFDTGVHHDPGTVTLEAPLDRLPLLVRAG EECHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCCCCCEEEEECCCCCCCEEEECC AGIPQCELPAPSGEIITTRTVENSPHRIVLYLPDGNGHSQGFFFDDDGHTNGYRQGHGYW CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEECCCCCCCCEECCCCEE LTWSADHTDTTVIVHTHVEGDYQPSWGTMAFALRPGDDRAIKVVADAAQD EEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCC >Mature Secondary Structure MDTLMRITDHLTTSPGIQLKIDKRWGASVTFVTRSIAHVRIFDAADPQLDRTWSISLGSN CCHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCEEEEEEEECCCCCCCCEEEEEECCC ATPRTGLGPRDLLDHSPAPAWAGNSRDVAPVEDMEVTTTVTASAEDTASHPEFSGVYADE CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEECCC PVDSPDPDEKSFIVGTDSLRVIIRDCPLRMTWQRRADDWVTVSEDRPTGAYEIGTHTGRV CCCCCCCCCCEEEEECCCEEEEEECCCCCEEECCCCCCCEEEECCCCCCCEEECCCCCHH AHHRVRNIDDRYYGLGEKSGDLERTGRIFDMRCLDALGYDAGSTDPLYKHVPFLMTRTAN HHHHHHCCCHHHCCCCCCCCCHHHCCCEEEHHHHHHHCCCCCCCCHHHHHCCEEEEECCC GAFGIFYDNLSASRFNLGAEVDNYHRPFTSWQADHGDIDYWVMTADHLCDLTPQILRLTG CEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCHHHEEECC NPAFLPRWALGYSGSTMHYTDAPDASCQLLKFIDLLREHAIPCDSFQLSSGYTTIGSRRY CCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEECCCEEE VFTWDRDKFSQPTDTTRHFRDAGLHLAANIKPALLTTHPYYRDVAEAGIFVTNSRTGEPA EEEECCCCCCCCCCHHHHHHHCCEEEEECCCCEEEECCCHHHHHHHCCEEEECCCCCCCC TSMFWGGHGSNVDFTNPRGVQWWKDNVRHQLIDMGIESTWNDNNEYELWSEDAICDGFGH HHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCC PVELDRIRPVQALLMSRASFEAQREAAPVERPFLISRSGPLGLQRYVQTWSGDNSTSWRT CEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCEEE LKYNTRMGVGMSMSGLVNFGHDVGGFAGTARPGPELFARWVANGVMHPRFTIHSWHNDGS EEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCC VNEPWMYPEITDIVREMIRLRYRLIPFLYTLSYLAAERREPIVNPVFSLDDTLHEESDDF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHCCCCCE LLGHDLLVASVVEKGQTTRTVTLPHVSDGWFEFDTGVHHDPGTVTLEAPLDRLPLLVRAG EECHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCCCCCCCCEEEEECCCCCCCEEEECC AGIPQCELPAPSGEIITTRTVENSPHRIVLYLPDGNGHSQGFFFDDDGHTNGYRQGHGYW CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEECCCCCCCCEECCCCEE LTWSADHTDTTVIVHTHVEGDYQPSWGTMAFALRPGDDRAIKVVADAAQD EEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10945254 [H]