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The map label for this gene is 50843693

Identifier: 50843693

GI number: 50843693

Start: 2446679

End: 2447326

Strand: Reverse

Name: 50843693

Synonym: PPA2260

Alternate gene names: NA

Gene position: 2447326-2446679 (Counterclockwise)

Preceding gene: 50843696

Following gene: 50843692

Centisome position: 95.59

GC content: 59.26

Gene sequence:

>648_bases
ATGACGGAGACGCATCACTCGTCGCAACCACGTCAGACGTACCATCATGGTCATCTTCACGAAGTCCTCGTAAAGAAGGG
TCTGGAGATGGCTCGCAGCGGTGGCACCGAGGCTGTTGTGCTGCGTGAGGCTACTCGCCGCGCAGGAGTATCACCTAACG
CCGCGTACCGTCACTTCGCGAATCGCGAGGCCCTTCTTGATGAGGTGGGTCTGGCGGCTGCCGACCAGATCGGTGTCGTC
ATGCGTGAAGCGGTGGCTGAGGCCCAGCCCATCGACGATGAGAGCGTGGCAGTTTCCCAACTCGTGGCTGCCTGCCGTGC
ATATCTTGATTTCGCTCTGACTGAGCCGGGGCTCTTCGACGTGGCGTATCGCATTTCGGATACGGGGCTTGACGCTCTTA
ACGTGGACCGGTCGAAAGCACCGAATCTGCCCGATTCGGTAATCCAAGATGTCCTTTCAGATCGAGAGGTCACGCTTTCT
GACCGGGTTGACGTCCGGAGCCTCGTCATTCTTCTGTGGTCCGTGCTTCACGGTTTTGCGTCGCTGTCGACTTCTGGTCC
CCTGCGTGGTGAGAAAACTCCGGAGTGGGCTGACCGGGTTCTCGATGTCATTCGTGCGTCCCTGCGCGGTGCGATAGCAC
GAGCTTGA

Upstream 100 bases:

>100_bases
AGGGGCTGTCAGCCGGGGCCACAGATGTCACGTATTGTTGGGCGTCAGCGTTCAGCCAGTCAGGTTGACACCATGCTACT
AACGGACCGGGGGATCATTA

Downstream 100 bases:

>100_bases
TGGTTCGAGGGAGTCGCGATCCGGGCTCCGAGGTTGGGGCCGGATACCGTCAGATTCTGAATCTGGCAGTGCCTGCTTTC
TTGTCCCTGATTGCTGAGCC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Regulatory Protein Tetr; TetR-Family Transcriptional Regulator; AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MTETHHSSQPRQTYHHGHLHEVLVKKGLEMARSGGTEAVVLREATRRAGVSPNAAYRHFANREALLDEVGLAAADQIGVV
MREAVAEAQPIDDESVAVSQLVAACRAYLDFALTEPGLFDVAYRISDTGLDALNVDRSKAPNLPDSVIQDVLSDREVTLS
DRVDVRSLVILLWSVLHGFASLSTSGPLRGEKTPEWADRVLDVIRASLRGAIARA

Sequences:

>Translated_215_residues
MTETHHSSQPRQTYHHGHLHEVLVKKGLEMARSGGTEAVVLREATRRAGVSPNAAYRHFANREALLDEVGLAAADQIGVV
MREAVAEAQPIDDESVAVSQLVAACRAYLDFALTEPGLFDVAYRISDTGLDALNVDRSKAPNLPDSVIQDVLSDREVTLS
DRVDVRSLVILLWSVLHGFASLSTSGPLRGEKTPEWADRVLDVIRASLRGAIARA
>Mature_214_residues
TETHHSSQPRQTYHHGHLHEVLVKKGLEMARSGGTEAVVLREATRRAGVSPNAAYRHFANREALLDEVGLAAADQIGVVM
REAVAEAQPIDDESVAVSQLVAACRAYLDFALTEPGLFDVAYRISDTGLDALNVDRSKAPNLPDSVIQDVLSDREVTLSD
RVDVRSLVILLWSVLHGFASLSTSGPLRGEKTPEWADRVLDVIRASLRGAIARA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23369; Mature: 23237

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETHHSSQPRQTYHHGHLHEVLVKKGLEMARSGGTEAVVLREATRRAGVSPNAAYRHFA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCHHHHHHH
NREALLDEVGLAAADQIGVVMREAVAEAQPIDDESVAVSQLVAACRAYLDFALTEPGLFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
VAYRISDTGLDALNVDRSKAPNLPDSVIQDVLSDREVTLSDRVDVRSLVILLWSVLHGFA
HHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SLSTSGPLRGEKTPEWADRVLDVIRASLRGAIARA
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TETHHSSQPRQTYHHGHLHEVLVKKGLEMARSGGTEAVVLREATRRAGVSPNAAYRHFA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCHHHHHHH
NREALLDEVGLAAADQIGVVMREAVAEAQPIDDESVAVSQLVAACRAYLDFALTEPGLFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
VAYRISDTGLDALNVDRSKAPNLPDSVIQDVLSDREVTLSDRVDVRSLVILLWSVLHGFA
HHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SLSTSGPLRGEKTPEWADRVLDVIRASLRGAIARA
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA