| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843696
Identifier: 50843696
GI number: 50843696
Start: 2448836
End: 2449234
Strand: Reverse
Name: 50843696
Synonym: PPA2263
Alternate gene names: NA
Gene position: 2449234-2448836 (Counterclockwise)
Preceding gene: 50843697
Following gene: 50843693
Centisome position: 95.66
GC content: 59.15
Gene sequence:
>399_bases ATGACACAGCAGCACACCTCGACTATCCCCTCTGCTCCTAAGGCTCTCACAATTTCCGCCTGGGTTGCCGTTGGGGCCGT GATTGTCCAGGCTGTTTTGGCCTGTTTCATGCTTTCCGGAGTTCACGGTCTCGGCGACGTGCACATGGGCTTCGGCATTG TGACCCTGCTGGCGGCTATCGTCGCGGCCGTTTTGGCCGTCATGTGGAAGCGCCGTGGTGGATCGTCGGCGGTCGTCGGT CACGCCGTCGGTATGGCGGTGCTAATCCTTGTTCAGTATGTCCTCGGTGAGCTGAGCAGTGGTGGCGCCATCAAGTGGAT TCACGTGGTACTTGGTGTCGTCATTGTGATCGGGCTGCTCGTCCTACCGCAGTCGATCGGCAAGAACCCCAGTAAGTGA
Upstream 100 bases:
>100_bases CCGTTGTGACAGCCAGTGCATTGGGATGCTGGTGGGGGCCATGGGTGATGGTGGGGCGAAGTTCACGATAAAGCTGTAGC CCTGGCCTAGAGTGTGGCTC
Downstream 100 bases:
>100_bases CCGGGGTTGGCGTTAGCAGGAGATTTTTGCCGTCACCGCTCCGGTGACAGTCACCAGGTCCGATGGTGACAATTCCACCG ACAGACCTCGACGCCCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTQQHTSTIPSAPKALTISAWVAVGAVIVQAVLACFMLSGVHGLGDVHMGFGIVTLLAAIVAAVLAVMWKRRGGSSAVVG HAVGMAVLILVQYVLGELSSGGAIKWIHVVLGVVIVIGLLVLPQSIGKNPSK
Sequences:
>Translated_132_residues MTQQHTSTIPSAPKALTISAWVAVGAVIVQAVLACFMLSGVHGLGDVHMGFGIVTLLAAIVAAVLAVMWKRRGGSSAVVG HAVGMAVLILVQYVLGELSSGGAIKWIHVVLGVVIVIGLLVLPQSIGKNPSK >Mature_131_residues TQQHTSTIPSAPKALTISAWVAVGAVIVQAVLACFMLSGVHGLGDVHMGFGIVTLLAAIVAAVLAVMWKRRGGSSAVVGH AVGMAVLILVQYVLGELSSGGAIKWIHVVLGVVIVIGLLVLPQSIGKNPSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13468; Mature: 13337
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQHTSTIPSAPKALTISAWVAVGAVIVQAVLACFMLSGVHGLGDVHMGFGIVTLLAAI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VAAVLAVMWKRRGGSSAVVGHAVGMAVLILVQYVLGELSSGGAIKWIHVVLGVVIVIGLL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VLPQSIGKNPSK HHHHHHCCCCCC >Mature Secondary Structure TQQHTSTIPSAPKALTISAWVAVGAVIVQAVLACFMLSGVHGLGDVHMGFGIVTLLAAI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH VAAVLAVMWKRRGGSSAVVGHAVGMAVLILVQYVLGELSSGGAIKWIHVVLGVVIVIGLL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH VLPQSIGKNPSK HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA