| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is 50843213
Identifier: 50843213
GI number: 50843213
Start: 1913865
End: 1915358
Strand: Reverse
Name: 50843213
Synonym: PPA1753
Alternate gene names: NA
Gene position: 1915358-1913865 (Counterclockwise)
Preceding gene: 50843214
Following gene: 50843212
Centisome position: 74.81
GC content: 61.85
Gene sequence:
>1494_bases ATGGTCAGATCAGGCTCGACATCGACCTCGGCGAGGTTCGTCATCGAGTCCTCCAAGGCCGACGAATCCCGAGAACCGCG CGTGCCATGGCCGTGGCCAGTCGTCGTCGTGGTGGCCGCGGCGGCAGCGATCCTGGTGCAATGGCTCGCTTTCGCCGGAA TTATCGTTCCGGAATGGCTGGCCAGTAACGGACGCTCATTTCCTAGCATCCTGGCAGCAGCGTCGAGTTTGTGGCTGAGC GGGCATGGGGTGCCCGTTGACATCATCGGGGTGCACATTGGCCTCATTCCGCTCGGTCTAACCTGCGTTAGCCTGCTACT CGGCGAAGAAGCCTGCCGATACGGTGCTCGCGTTCTATGGCACCGACACGATAAAAGACCAGCACGTCGACACGTCGGTG AGGCGGTAGCCCTCCACACTACAATTGAGCTGCTAGCGGCCGTCGTGATGGCGGCTGGCGCAACGACGCCCCATTGGCTG GCAGCCATGGTCGGGGCATTGCTCATCGGGCTGTGTTCAGGGATCGTCGGGGCATGTCGTGGCGCCCACATCAATCCCCT GAGTCGATTACCACACTGGGCCCGAGGATTACCGAAAGCCGTCGGGGCAACCGTTGCCGTCTGTCTGGCTGGCGGGGCAG CGGCGCTTGCCGTGGCGCTGTTAGTTCATGCAGACCGGGTCATTCATCTGCATCAGCAGATCGGGGCCACCGGGTGGGGT GGGTTCTGCCTCATCCTCCTGCAGTTGGCATGGCTACCGACGATGGCGCTGTGGGGCACCGCATGGACGATGAGTCCAGG CTTCGCCTTCGGTACCGGAACCTTCGTATCCCCGCTGGGAAGCCACCTTGGTATCGTTCCGGCCCTGCCGGTGCTTGGTG CACTACCGCCTAATGGTCCGTTAAACCCGGCAGCTTGTGTATGGCTCGCTGTACCGGTCGTCGCTGCGATCGTCGGTGGA ATCCTTGTTATGAGGTCTCTTCCGGAGGCCGAATTCGAGATCGGGTGTGGGCTCGGCGCCCTATCGGGCCTGCTATCAGG GCTTGTGCTCGGTGCCTTGGGGTCGCTCAGCAGCGGAAATCTCGGAGATGGGCGACTGAGTGAGGTCGGCACGATCATGC CGGCTACTGGCGGGTGTGCCGTTGGTGTCTTGACCCTGGTGACGATGCTGTGCGGTTTCGTCATCGGCTTGTCTCGACGT TTGAGGTCCGAAGAGTCGCGTCAGGGGCGCGCGGAGCGCCGTCAGGAGCGCAAGAAGAACCACGCCGTCAAAGCCGAGAA AAAAGCTCGCAACCGCGCCGCTAAGAAGAAGGCAAAAGCTGAGCAGAAGGCGGCAGCTGACAAGCGAGAAGCTGAAGCTA AACAGGACAAGGTTGCCCCCGAGAATGCCACCGCAGAGCCGGTCGACGATGAGGCAATCGGTCACGACATATACGACTCC ATTCAACACAACCAGGACGCCCCTGACGATGGCGACACCACGGACCGACCTTGA
Upstream 100 bases:
>100_bases TCCATGCATTCAGACGGCCCTGGTGTGGTAACCGAAAAAGTTGTTGGTGGACGGTAGGGTTCCCTATAACTTCCTTCCCC AAACCGAACAGGATTCCCGC
Downstream 100 bases:
>100_bases GCTGGACCGTCTGCGGTAACAAACCAGTGAGATGATGTCGCACCCCATGGCGAACAGGTGCATACTTATCAGCAAGCACA CGTGCTCCGGGGTCGGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MVRSGSTSTSARFVIESSKADESREPRVPWPWPVVVVVAAAAAILVQWLAFAGIIVPEWLASNGRSFPSILAAASSLWLS GHGVPVDIIGVHIGLIPLGLTCVSLLLGEEACRYGARVLWHRHDKRPARRHVGEAVALHTTIELLAAVVMAAGATTPHWL AAMVGALLIGLCSGIVGACRGAHINPLSRLPHWARGLPKAVGATVAVCLAGGAAALAVALLVHADRVIHLHQQIGATGWG GFCLILLQLAWLPTMALWGTAWTMSPGFAFGTGTFVSPLGSHLGIVPALPVLGALPPNGPLNPAACVWLAVPVVAAIVGG ILVMRSLPEAEFEIGCGLGALSGLLSGLVLGALGSLSSGNLGDGRLSEVGTIMPATGGCAVGVLTLVTMLCGFVIGLSRR LRSEESRQGRAERRQERKKNHAVKAEKKARNRAAKKKAKAEQKAAADKREAEAKQDKVAPENATAEPVDDEAIGHDIYDS IQHNQDAPDDGDTTDRP
Sequences:
>Translated_497_residues MVRSGSTSTSARFVIESSKADESREPRVPWPWPVVVVVAAAAAILVQWLAFAGIIVPEWLASNGRSFPSILAAASSLWLS GHGVPVDIIGVHIGLIPLGLTCVSLLLGEEACRYGARVLWHRHDKRPARRHVGEAVALHTTIELLAAVVMAAGATTPHWL AAMVGALLIGLCSGIVGACRGAHINPLSRLPHWARGLPKAVGATVAVCLAGGAAALAVALLVHADRVIHLHQQIGATGWG GFCLILLQLAWLPTMALWGTAWTMSPGFAFGTGTFVSPLGSHLGIVPALPVLGALPPNGPLNPAACVWLAVPVVAAIVGG ILVMRSLPEAEFEIGCGLGALSGLLSGLVLGALGSLSSGNLGDGRLSEVGTIMPATGGCAVGVLTLVTMLCGFVIGLSRR LRSEESRQGRAERRQERKKNHAVKAEKKARNRAAKKKAKAEQKAAADKREAEAKQDKVAPENATAEPVDDEAIGHDIYDS IQHNQDAPDDGDTTDRP >Mature_497_residues MVRSGSTSTSARFVIESSKADESREPRVPWPWPVVVVVAAAAAILVQWLAFAGIIVPEWLASNGRSFPSILAAASSLWLS GHGVPVDIIGVHIGLIPLGLTCVSLLLGEEACRYGARVLWHRHDKRPARRHVGEAVALHTTIELLAAVVMAAGATTPHWL AAMVGALLIGLCSGIVGACRGAHINPLSRLPHWARGLPKAVGATVAVCLAGGAAALAVALLVHADRVIHLHQQIGATGWG GFCLILLQLAWLPTMALWGTAWTMSPGFAFGTGTFVSPLGSHLGIVPALPVLGALPPNGPLNPAACVWLAVPVVAAIVGG ILVMRSLPEAEFEIGCGLGALSGLLSGLVLGALGSLSSGNLGDGRLSEVGTIMPATGGCAVGVLTLVTMLCGFVIGLSRR LRSEESRQGRAERRQERKKNHAVKAEKKARNRAAKKKAKAEQKAAADKREAEAKQDKVAPENATAEPVDDEAIGHDIYDS IQHNQDAPDDGDTTDRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51811; Mature: 51811
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRSGSTSTSARFVIESSKADESREPRVPWPWPVVVVVAAAAAILVQWLAFAGIIVPEWL CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASNGRSFPSILAAASSLWLSGHGVPVDIIGVHIGLIPLGLTCVSLLLGEEACRYGARVLW HCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRHDKRPARRHVGEAVALHTTIELLAAVVMAAGATTPHWLAAMVGALLIGLCSGIVGACR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GAHINPLSRLPHWARGLPKAVGATVAVCLAGGAAALAVALLVHADRVIHLHQQIGATGWG CCCCCHHHHCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH GFCLILLQLAWLPTMALWGTAWTMSPGFAFGTGTFVSPLGSHLGIVPALPVLGALPPNGP HHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCC LNPAACVWLAVPVVAAIVGGILVMRSLPEAEFEIGCGLGALSGLLSGLVLGALGSLSSGN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC LGDGRLSEVGTIMPATGGCAVGVLTLVTMLCGFVIGLSRRLRSEESRQGRAERRQERKKN CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH HAVKAEKKARNRAAKKKAKAEQKAAADKREAEAKQDKVAPENATAEPVDDEAIGHDIYDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCHHHHHH IQHNQDAPDDGDTTDRP HHCCCCCCCCCCCCCCC >Mature Secondary Structure MVRSGSTSTSARFVIESSKADESREPRVPWPWPVVVVVAAAAAILVQWLAFAGIIVPEWL CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASNGRSFPSILAAASSLWLSGHGVPVDIIGVHIGLIPLGLTCVSLLLGEEACRYGARVLW HCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRHDKRPARRHVGEAVALHTTIELLAAVVMAAGATTPHWLAAMVGALLIGLCSGIVGACR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GAHINPLSRLPHWARGLPKAVGATVAVCLAGGAAALAVALLVHADRVIHLHQQIGATGWG CCCCCHHHHCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH GFCLILLQLAWLPTMALWGTAWTMSPGFAFGTGTFVSPLGSHLGIVPALPVLGALPPNGP HHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCC LNPAACVWLAVPVVAAIVGGILVMRSLPEAEFEIGCGLGALSGLLSGLVLGALGSLSSGN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC LGDGRLSEVGTIMPATGGCAVGVLTLVTMLCGFVIGLSRRLRSEESRQGRAERRQERKKN CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH HAVKAEKKARNRAAKKKAKAEQKAAADKREAEAKQDKVAPENATAEPVDDEAIGHDIYDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCHHHHHH IQHNQDAPDDGDTTDRP HHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA