| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843150
Identifier: 50843150
GI number: 50843150
Start: 1840182
End: 1841201
Strand: Reverse
Name: 50843150
Synonym: PPA1688
Alternate gene names: NA
Gene position: 1841201-1840182 (Counterclockwise)
Preceding gene: 50843151
Following gene: 50843149
Centisome position: 71.91
GC content: 64.02
Gene sequence:
>1020_bases GTGACTTTCGACGATTCGCGTCTCGACGCGCCTCTTGACGCACTCGCCGAGCGGGTGCTGCGTCAGTTGGCTAGCACGGG AGCGCGCATTCGTCGTGACTCTGCGGATCTCGGCGAGGTACGTCGAACGGTCGGTGAGTGGGGACAGCCCCGGGGGGTAC TCGTTGTCGGCCCCGAGGCTCGTTTAGTGCGGTCTGTCCTTGAGCCGATATGTCCCGTCCCGCTAGTCGCGTGGCCTTTC CTGCGGCTGCCAGCGTGGGTTGGCCCCCTTGATCTTGTCGTCGCCCTCGATAGCGATGGACGGTGTGCGGCCCAGGTAGC TGAGGCCCGACGTCGAGGTAGTGCCATCATCTTGGCGTCCAGTGGCGAGACCGAGGCTTGGCAAGCTGCCGGTAGCCACG GCACTGCCCGTATTCAGATGGCCTCCGAGGATGCTATGTCGGCCGCTGTCGCGGCTCTGTCGGTGCTGAGCGACCTGGGT CTTGGACCAGTTGTCGATCCCGGGCAGGTTGCTCGGGTTGCGGATATGGTTGCCGAGTCGGCTTCGCCCCACCATGACCT CGCCGTCAACGAGGCTAAGGATCTCGCGTGTGCGTTAGCCGATGCAGAGCCCCTCTTGTGGGGTGGTTCTGTCCTTGCGG CGCGGGCATCGCGACGCCTCGCACAATGGATGAGGCGAGCCACGGGTCGTATCGCCTTGTCCGCCGACTCCGCAGCGCTG CGTCCTGTCATTGATTCTGCTCCTAGGAGGGATCCCTTCGCTGATCCTGACCTTGACGGTGAGACGCGTCGCCCTGTCCT TGTCGTCATGGATGACGCCGAGACTGAGCACGCCGCTGCCCGCCGCGACCTTGAGCAGCTGTGCGCCGCCCATGATGTGA CGGTGCGCAGCGTCACCTTGCCGCTCGGCATTGATGAGCAGTCCTCGCCGATGAGCCGCTATGTCGCCTTGCTACTCCAG GGAAGTTTCGCCGCTGTCTACGTGGCTCTCGGACTGGATCGTCTGAAAGAGATGACATGA
Upstream 100 bases:
>100_bases TTCGCCTTGACGCGGCGCGTAAGCGAGAAACTGGTCAGGGGGTCACTGCCGAGGACACCGAAGCTTTTGAGCCCACTCAT CGTCATGAGATGAGGCCGCA
Downstream 100 bases:
>100_bases GCCAAGCGCACGCTGCCCAGCGGCCGAACGGGGCCAAGGAGCCAGCCAACCCGACGCAGGGAGGCCGCAAAGCGATCATC GCAGCTGCCTCCGCCAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MTFDDSRLDAPLDALAERVLRQLASTGARIRRDSADLGEVRRTVGEWGQPRGVLVVGPEARLVRSVLEPICPVPLVAWPF LRLPAWVGPLDLVVALDSDGRCAAQVAEARRRGSAIILASSGETEAWQAAGSHGTARIQMASEDAMSAAVAALSVLSDLG LGPVVDPGQVARVADMVAESASPHHDLAVNEAKDLACALADAEPLLWGGSVLAARASRRLAQWMRRATGRIALSADSAAL RPVIDSAPRRDPFADPDLDGETRRPVLVVMDDAETEHAAARRDLEQLCAAHDVTVRSVTLPLGIDEQSSPMSRYVALLLQ GSFAAVYVALGLDRLKEMT
Sequences:
>Translated_339_residues MTFDDSRLDAPLDALAERVLRQLASTGARIRRDSADLGEVRRTVGEWGQPRGVLVVGPEARLVRSVLEPICPVPLVAWPF LRLPAWVGPLDLVVALDSDGRCAAQVAEARRRGSAIILASSGETEAWQAAGSHGTARIQMASEDAMSAAVAALSVLSDLG LGPVVDPGQVARVADMVAESASPHHDLAVNEAKDLACALADAEPLLWGGSVLAARASRRLAQWMRRATGRIALSADSAAL RPVIDSAPRRDPFADPDLDGETRRPVLVVMDDAETEHAAARRDLEQLCAAHDVTVRSVTLPLGIDEQSSPMSRYVALLLQ GSFAAVYVALGLDRLKEMT >Mature_338_residues TFDDSRLDAPLDALAERVLRQLASTGARIRRDSADLGEVRRTVGEWGQPRGVLVVGPEARLVRSVLEPICPVPLVAWPFL RLPAWVGPLDLVVALDSDGRCAAQVAEARRRGSAIILASSGETEAWQAAGSHGTARIQMASEDAMSAAVAALSVLSDLGL GPVVDPGQVARVADMVAESASPHHDLAVNEAKDLACALADAEPLLWGGSVLAARASRRLAQWMRRATGRIALSADSAALR PVIDSAPRRDPFADPDLDGETRRPVLVVMDDAETEHAAARRDLEQLCAAHDVTVRSVTLPLGIDEQSSPMSRYVALLLQG SFAAVYVALGLDRLKEMT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36061; Mature: 35930
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDDSRLDAPLDALAERVLRQLASTGARIRRDSADLGEVRRTVGEWGQPRGVLVVGPEA CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCHH RLVRSVLEPICPVPLVAWPFLRLPAWVGPLDLVVALDSDGRCAAQVAEARRRGSAIILAS HHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEC SGETEAWQAAGSHGTARIQMASEDAMSAAVAALSVLSDLGLGPVVDPGQVARVADMVAES CCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC ASPHHDLAVNEAKDLACALADAEPLLWGGSVLAARASRRLAQWMRRATGRIALSADSAAL CCCCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH RPVIDSAPRRDPFADPDLDGETRRPVLVVMDDAETEHAAARRDLEQLCAAHDVTVRSVTL HHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEE PLGIDEQSSPMSRYVALLLQGSFAAVYVALGLDRLKEMT ECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TFDDSRLDAPLDALAERVLRQLASTGARIRRDSADLGEVRRTVGEWGQPRGVLVVGPEA CCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCHH RLVRSVLEPICPVPLVAWPFLRLPAWVGPLDLVVALDSDGRCAAQVAEARRRGSAIILAS HHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEC SGETEAWQAAGSHGTARIQMASEDAMSAAVAALSVLSDLGLGPVVDPGQVARVADMVAES CCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC ASPHHDLAVNEAKDLACALADAEPLLWGGSVLAARASRRLAQWMRRATGRIALSADSAAL CCCCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH RPVIDSAPRRDPFADPDLDGETRRPVLVVMDDAETEHAAARRDLEQLCAAHDVTVRSVTL HHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEE PLGIDEQSSPMSRYVALLLQGSFAAVYVALGLDRLKEMT ECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA