| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is 50843063
Identifier: 50843063
GI number: 50843063
Start: 1719434
End: 1719895
Strand: Reverse
Name: 50843063
Synonym: PPA1593
Alternate gene names: NA
Gene position: 1719895-1719434 (Counterclockwise)
Preceding gene: 50843064
Following gene: 50843062
Centisome position: 67.18
GC content: 62.99
Gene sequence:
>462_bases ATGCATGTGATGACCAAATACCTCGACACCCGCAAAGCAGCCATCAGCGCATTGCAGGACTTCGCCGTGATGGAGCAGAT CATCGACACCACCGACGAGCAGATCAAGACCGCCTACGACGACGTCACCACCCCAGCCTCATCGAAACTCGACGGGATGC CCCGCCACACGGATCTGCATGCTGGGGAGATGCGGGTGGCGGCCACGTTGGATCGGATCGACATCTACCGTGCCCGTTAC GCCCAGGCGCGTGAGTACATGGCGTGGTTCCTGCCCGCCTGGCAGCTGCTCACCGACGACGACAGGTTCGTGCTCGAAGC ATTCTTCCTCGGCGACGGTACCCAGGATGAGGCGGTGCAAACGGTGTGTGACCACTTCTACGTGGAGCGCACCAGCGCCT ACCAGAAGAAGTCTCGGGCGCTCGCCCGGCTGGCGTCGGCGCTGTATGGGCAGGCCGCGTGA
Upstream 100 bases:
>100_bases AAGCCGTCCTCAAGGCGCTGGAGGCGAAGGACATGACCCAGGCCGCATTGATCGACGCGGTCGCCACCGAACTCACAACC ATAAGCAGGAAGGAGTCGTC
Downstream 100 bases:
>100_bases ACCTAGCCGCCAAAAGGTGTCAAGAACTGCGGATGCATTTAGGGTTTCGGGCCTGCAATGATGTAGGTGGTTGAAAAGTA GGAAAAGCCCCAGGGCAAGC
Product: phage-associated protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MHVMTKYLDTRKAAISALQDFAVMEQIIDTTDEQIKTAYDDVTTPASSKLDGMPRHTDLHAGEMRVAATLDRIDIYRARY AQAREYMAWFLPAWQLLTDDDRFVLEAFFLGDGTQDEAVQTVCDHFYVERTSAYQKKSRALARLASALYGQAA
Sequences:
>Translated_153_residues MHVMTKYLDTRKAAISALQDFAVMEQIIDTTDEQIKTAYDDVTTPASSKLDGMPRHTDLHAGEMRVAATLDRIDIYRARY AQAREYMAWFLPAWQLLTDDDRFVLEAFFLGDGTQDEAVQTVCDHFYVERTSAYQKKSRALARLASALYGQAA >Mature_153_residues MHVMTKYLDTRKAAISALQDFAVMEQIIDTTDEQIKTAYDDVTTPASSKLDGMPRHTDLHAGEMRVAATLDRIDIYRARY AQAREYMAWFLPAWQLLTDDDRFVLEAFFLGDGTQDEAVQTVCDHFYVERTSAYQKKSRALARLASALYGQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17395; Mature: 17395
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVMTKYLDTRKAAISALQDFAVMEQIIDTTDEQIKTAYDDVTTPASSKLDGMPRHTDLH CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AGEMRVAATLDRIDIYRARYAQAREYMAWFLPAWQLLTDDDRFVLEAFFLGDGTQDEAVQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH TVCDHFYVERTSAYQKKSRALARLASALYGQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHVMTKYLDTRKAAISALQDFAVMEQIIDTTDEQIKTAYDDVTTPASSKLDGMPRHTDLH CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AGEMRVAATLDRIDIYRARYAQAREYMAWFLPAWQLLTDDDRFVLEAFFLGDGTQDEAVQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH TVCDHFYVERTSAYQKKSRALARLASALYGQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA