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The map label for this gene is 50843064

Identifier: 50843064

GI number: 50843064

Start: 1719886

End: 1721262

Strand: Reverse

Name: 50843064

Synonym: PPA1594

Alternate gene names: NA

Gene position: 1721262-1719886 (Counterclockwise)

Preceding gene: 50843065

Following gene: 50843063

Centisome position: 67.23

GC content: 63.69

Gene sequence:

>1377_bases
ATGCGCTACCGGCCGCATAACTACCAGCAGACCGCCACGCGGTTCATCCTCGACCACCACGAAGCGGCGATCCTCCTGGG
CATGGGACTCGGCAAGAGTGTCATCACCCTGACGGCAATCTGGCAGCTGCTGCTCGACTACTTCACCGTCAGCCGGGTGC
TCGTCGTCGCGCCACTCCGGGTCGCCCGCGACACCTGGCCAGCAGAAGTAGCCAAGTGGGACCACCTCCAAGGTCTATCG
GTGGCGGTCGCGGTCGGCACCAAAGCTGACCGGCTCGACGCGCTGGCCAAGTCGGCGATGGTGACCGTCATCAACCGGGA
AAACATCCCCTGGCTCGTCAGACAGTACGGCGATAGCTGGCCGTTCGACATGGTCGTCATCGACGAACTCTCCAGCTTCA
AGAACCACCGTGCGAAGCGGTTCACGGCGTTGGTGAAAATGCGCCCACACGTGAAGCGCTGGGTCGGCCTGACCGGCACC
CCCGCCTCCAACGGGCTCATGGACATCTGGGCGCAATTCCGGCTCCTCGACGGCGGCCAACGCCTCGGCAGATTCATCAC
CCGCTACCGCGACAAGTGGTTCCTGCCGGATAAGCGCAACGGGATGCAGGTGTTCACGTACAAGCCGAGGGCAGGCGCTG
AGGAGGAAATCTACGACGCTATCGCCGACATGACGTTGTCAATGCGCACCACCGACCACCTCACGCTGCCTGATCTGACG
GTGACGACCACGCCCGTGGTGCTCGGAGCCGGAGAACGAGCTGTGTATGAGCAGCTCAAGGCCGACCTGGTGGTTGATCT
GGATGGGCAGGTGGTGGATGCGGCGAACGCAGCCGCGCTGTCGGGCAAGCTGCTGCAGCTCGCCTCGGGTGCGATCTACG
ACGAGCACGGCGATACGGTCGAGGTGCATGGGGCGAAACTCGATGCCCTCGAAGACATCATCGAGGCCGCCAACGGCCAA
ACCGTCCTCGTCGCCTACTGGTACCGACACGACCGCGAACGCATCCAGCGTCGCTTCCCACAAGCCCGCGAACTGAAGAC
GTCGGCGGACATCGAGGCGTGGAACCGGGGCGACATCCCGCTTGGCCTGATCCACCCCGCTTCCGCTGGGCACGGATTGA
ATCTGCAGTCCGGTGGCCACCTGCTCGTGTGGTTCTCGCTGACCTGGAGCTTGGAGCTGTATCAGCAGACCAACGCCCGG
CTGTATCGACAAGGACAGGCCGAGCCTGTCACCATCACCCACCTCACCGCCACCGGCACCCTCGACCAAGCCGTCCTCAA
GGCGCTGGAGGCGAAGGACATGACCCAGGCCGCATTGATCGACGCGGTCGCCACCGAACTCACAACCATAAGCAGGAAGG
AGTCGTCATGCATGTGA

Upstream 100 bases:

>100_bases
AAGCCTCGGCCGATCCAACGCCGCCGGATGAGCCAACTGGCCGCCCACGGCTTCACCGCGCTGGTCGTTGACTCGGTGGA
CGGCATCAAGAAGGTGCTTG

Downstream 100 bases:

>100_bases
TGACCAAATACCTCGACACCCGCAAAGCAGCCATCAGCGCATTGCAGGACTTCGCCGTGATGGAGCAGATCATCGACACC
ACCGACGAGCAGATCAAGAC

Product: phage-associated protein

Products: NA

Alternate protein names: SNF2 Domain Protein; SNF2 Domain-Containing Protein; SNF2-Like Protein; SNF2 Family DNA/RNA Helicase; Phage-Associated Helicase; Helicase; Phage Related DNA Helicase; Superfamily II DNA/RNA Helicase; Helicase-Like Protein; Phage-Related DNA Helicase; Phage-Associated Helicase Snf2 Family; SNF2 Family Helicase; SNF2 Related Protein; SWI/SNF Chromatin-Remodeling Complex Subunit; Prophage; SNF2 Family Protein; Phage-Associated Protein; Phage DNA Helicase Partial; APSE-2 Prophage; SNF2

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MRYRPHNYQQTATRFILDHHEAAILLGMGLGKSVITLTAIWQLLLDYFTVSRVLVVAPLRVARDTWPAEVAKWDHLQGLS
VAVAVGTKADRLDALAKSAMVTVINRENIPWLVRQYGDSWPFDMVVIDELSSFKNHRAKRFTALVKMRPHVKRWVGLTGT
PASNGLMDIWAQFRLLDGGQRLGRFITRYRDKWFLPDKRNGMQVFTYKPRAGAEEEIYDAIADMTLSMRTTDHLTLPDLT
VTTTPVVLGAGERAVYEQLKADLVVDLDGQVVDAANAAALSGKLLQLASGAIYDEHGDTVEVHGAKLDALEDIIEAANGQ
TVLVAYWYRHDRERIQRRFPQARELKTSADIEAWNRGDIPLGLIHPASAGHGLNLQSGGHLLVWFSLTWSLELYQQTNAR
LYRQGQAEPVTITHLTATGTLDQAVLKALEAKDMTQAALIDAVATELTTISRKESSCM

Sequences:

>Translated_458_residues
MRYRPHNYQQTATRFILDHHEAAILLGMGLGKSVITLTAIWQLLLDYFTVSRVLVVAPLRVARDTWPAEVAKWDHLQGLS
VAVAVGTKADRLDALAKSAMVTVINRENIPWLVRQYGDSWPFDMVVIDELSSFKNHRAKRFTALVKMRPHVKRWVGLTGT
PASNGLMDIWAQFRLLDGGQRLGRFITRYRDKWFLPDKRNGMQVFTYKPRAGAEEEIYDAIADMTLSMRTTDHLTLPDLT
VTTTPVVLGAGERAVYEQLKADLVVDLDGQVVDAANAAALSGKLLQLASGAIYDEHGDTVEVHGAKLDALEDIIEAANGQ
TVLVAYWYRHDRERIQRRFPQARELKTSADIEAWNRGDIPLGLIHPASAGHGLNLQSGGHLLVWFSLTWSLELYQQTNAR
LYRQGQAEPVTITHLTATGTLDQAVLKALEAKDMTQAALIDAVATELTTISRKESSCM
>Mature_458_residues
MRYRPHNYQQTATRFILDHHEAAILLGMGLGKSVITLTAIWQLLLDYFTVSRVLVVAPLRVARDTWPAEVAKWDHLQGLS
VAVAVGTKADRLDALAKSAMVTVINRENIPWLVRQYGDSWPFDMVVIDELSSFKNHRAKRFTALVKMRPHVKRWVGLTGT
PASNGLMDIWAQFRLLDGGQRLGRFITRYRDKWFLPDKRNGMQVFTYKPRAGAEEEIYDAIADMTLSMRTTDHLTLPDLT
VTTTPVVLGAGERAVYEQLKADLVVDLDGQVVDAANAAALSGKLLQLASGAIYDEHGDTVEVHGAKLDALEDIIEAANGQ
TVLVAYWYRHDRERIQRRFPQARELKTSADIEAWNRGDIPLGLIHPASAGHGLNLQSGGHLLVWFSLTWSLELYQQTNAR
LYRQGQAEPVTITHLTATGTLDQAVLKALEAKDMTQAALIDAVATELTTISRKESSCM

Specific function: Unknown

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51117; Mature: 51117

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRPHNYQQTATRFILDHHEAAILLGMGLGKSVITLTAIWQLLLDYFTVSRVLVVAPLR
CCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VARDTWPAEVAKWDHLQGLSVAVAVGTKADRLDALAKSAMVTVINRENIPWLVRQYGDSW
HHHCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHEEEEEECCCCCHHHHHCCCCC
PFDMVVIDELSSFKNHRAKRFTALVKMRPHVKRWVGLTGTPASNGLMDIWAQFRLLDGGQ
CEEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHH
RLGRFITRYRDKWFLPDKRNGMQVFTYKPRAGAEEEIYDAIADMTLSMRTTDHLTLPDLT
HHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCEEEEECCCCEECCCCE
VTTTPVVLGAGERAVYEQLKADLVVDLDGQVVDAANAAALSGKLLQLASGAIYDEHGDTV
EECCCEEEECCCHHHHHHHCCCEEEECCCCEECCCCHHHHHHHHHHHHCCCEECCCCCEE
EVHGAKLDALEDIIEAANGQTVLVAYWYRHDRERIQRRFPQARELKTSADIEAWNRGDIP
EECCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCC
LGLIHPASAGHGLNLQSGGHLLVWFSLTWSLELYQQTNARLYRQGQAEPVTITHLTATGT
EEEEECCCCCCCCEECCCCCEEEEEEEEEEEEEHHHHCHHHHHCCCCCCEEEEEEEECCC
LDQAVLKALEAKDMTQAALIDAVATELTTISRKESSCM
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRYRPHNYQQTATRFILDHHEAAILLGMGLGKSVITLTAIWQLLLDYFTVSRVLVVAPLR
CCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VARDTWPAEVAKWDHLQGLSVAVAVGTKADRLDALAKSAMVTVINRENIPWLVRQYGDSW
HHHCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHEEEEEECCCCCHHHHHCCCCC
PFDMVVIDELSSFKNHRAKRFTALVKMRPHVKRWVGLTGTPASNGLMDIWAQFRLLDGGQ
CEEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHH
RLGRFITRYRDKWFLPDKRNGMQVFTYKPRAGAEEEIYDAIADMTLSMRTTDHLTLPDLT
HHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCEEEEECCCCEECCCCE
VTTTPVVLGAGERAVYEQLKADLVVDLDGQVVDAANAAALSGKLLQLASGAIYDEHGDTV
EECCCEEEECCCHHHHHHHCCCEEEECCCCEECCCCHHHHHHHHHHHHCCCEECCCCCEE
EVHGAKLDALEDIIEAANGQTVLVAYWYRHDRERIQRRFPQARELKTSADIEAWNRGDIP
EECCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCC
LGLIHPASAGHGLNLQSGGHLLVWFSLTWSLELYQQTNARLYRQGQAEPVTITHLTATGT
EEEEECCCCCCCCEECCCCCEEEEEEEEEEEEEHHHHCHHHHHCCCCCCEEEEEEEECCC
LDQAVLKALEAKDMTQAALIDAVATELTTISRKESSCM
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA