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The map label for this gene is 50842918

Identifier: 50842918

GI number: 50842918

Start: 1556379

End: 1557113

Strand: Reverse

Name: 50842918

Synonym: PPA1439

Alternate gene names: NA

Gene position: 1557113-1556379 (Counterclockwise)

Preceding gene: 50842919

Following gene: 50842917

Centisome position: 60.82

GC content: 55.92

Gene sequence:

>735_bases
TTGGCTAGTCTTTGGTCCGTGGCGACTACAACACTTACTACTCATCAGAGAGCGGTGCGATCAACTGTCGCGGCGAAGGC
CCTCATGGCCGTCACCGGGCTGATCTTAATCCTCTTCCTGCTCATGCACATGTTTGGCAACTTGAAGCTGCTCGCTAGTA
ACGAGGAATTCAATCGTTACGCCGGTTTTCTTCGCACGATTCTCAACCCGATCCTGCCGGGTGAATCCTTCTTGTGGATT
TTCCGGATCTTCATGTTGCTGGCGATCGTGCTGCACATTTGGTCGGCGATTCGCGTTAACAAGCAGCGCAACATTGGAAC
CGGTGGCGCTGGCCGTTACTCGGTTAAGAAGAACCTCTCGCCGGAGAATACCTATGCTGCCCGCACGATGTTCTGGGGTG
GCTGGATCATCTTCCTATTCCTCATCCTCCACCTGCTGCAGTTCACCATTAGCCCTGACTTGCTCAATAACCCGCCCACC
GATGCAGCTGGACGCGCAGGGATGGTACTTACGGCCTTCAGCCACTGGTGGTTCGTGCTCATTTACCTCATCGCCATGAT
CGCGGTGTGCATGCACGTCTCCCACGGTTTCTGGAGTGCCTTTGCGACCCTCGGCGTCAACGTCTCTGGTACCGCTCGCG
CTGTGCTGCGCGTGTGTTCCTGGATCGTCGCCATCGTGATCTTCGTGGGCTTCATGACTCCTCCATTCCTGGTCCTGTTC
GGGGTGATCTCCTGA

Upstream 100 bases:

>100_bases
CCGAAAATGTTGCGATAATCAAGAGTAAAACCCTTAGTGAACCAAGGGTCGAGGGAAGTTTTCGAAAACACAGGGGGTGG
GGGCGCAAAAGGGCTGGTAA

Downstream 100 bases:

>100_bases
TGACTGCAACTGCTGCATCCAATAACAACGCCGCTCTCGCCGACCAGTACTGGACGACCGGCGACGAAATCCACGACACG
AAGGCCAACCATGACCTTCC

Product: succinate dehydrogenase cytochrome B-558 subunit

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Subunit C; Cytochrome B Subunit; Succinate Dehydrogenase Subunit; SuccinateQuinone Oxidoreductase-Like Protein; Succinate Dehydrogenase/Fumarate Reductase Cytochrome; Succinate Dehydrogenase Cytochrome Subunit B; Succinate Dehydrogenease Cytochrome B Subunit

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MASLWSVATTTLTTHQRAVRSTVAAKALMAVTGLILILFLLMHMFGNLKLLASNEEFNRYAGFLRTILNPILPGESFLWI
FRIFMLLAIVLHIWSAIRVNKQRNIGTGGAGRYSVKKNLSPENTYAARTMFWGGWIIFLFLILHLLQFTISPDLLNNPPT
DAAGRAGMVLTAFSHWWFVLIYLIAMIAVCMHVSHGFWSAFATLGVNVSGTARAVLRVCSWIVAIVIFVGFMTPPFLVLF
GVIS

Sequences:

>Translated_244_residues
MASLWSVATTTLTTHQRAVRSTVAAKALMAVTGLILILFLLMHMFGNLKLLASNEEFNRYAGFLRTILNPILPGESFLWI
FRIFMLLAIVLHIWSAIRVNKQRNIGTGGAGRYSVKKNLSPENTYAARTMFWGGWIIFLFLILHLLQFTISPDLLNNPPT
DAAGRAGMVLTAFSHWWFVLIYLIAMIAVCMHVSHGFWSAFATLGVNVSGTARAVLRVCSWIVAIVIFVGFMTPPFLVLF
GVIS
>Mature_243_residues
ASLWSVATTTLTTHQRAVRSTVAAKALMAVTGLILILFLLMHMFGNLKLLASNEEFNRYAGFLRTILNPILPGESFLWIF
RIFMLLAIVLHIWSAIRVNKQRNIGTGGAGRYSVKKNLSPENTYAARTMFWGGWIIFLFLILHLLQFTISPDLLNNPPTD
AAGRAGMVLTAFSHWWFVLIYLIAMIAVCMHVSHGFWSAFATLGVNVSGTARAVLRVCSWIVAIVIFVGFMTPPFLVLFG
VIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 27165; Mature: 27034

Theoretical pI: Translated: 11.24; Mature: 11.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLWSVATTTLTTHQRAVRSTVAAKALMAVTGLILILFLLMHMFGNLKLLASNEEFNRY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHH
AGFLRTILNPILPGESFLWIFRIFMLLAIVLHIWSAIRVNKQRNIGTGGAGRYSVKKNLS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCC
PENTYAARTMFWGGWIIFLFLILHLLQFTISPDLLNNPPTDAAGRAGMVLTAFSHWWFVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHH
IYLIAMIAVCMHVSHGFWSAFATLGVNVSGTARAVLRVCSWIVAIVIFVGFMTPPFLVLF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
GVIS
HHCC
>Mature Secondary Structure 
ASLWSVATTTLTTHQRAVRSTVAAKALMAVTGLILILFLLMHMFGNLKLLASNEEFNRY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHH
AGFLRTILNPILPGESFLWIFRIFMLLAIVLHIWSAIRVNKQRNIGTGGAGRYSVKKNLS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCC
PENTYAARTMFWGGWIIFLFLILHLLQFTISPDLLNNPPTDAAGRAGMVLTAFSHWWFVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHH
IYLIAMIAVCMHVSHGFWSAFATLGVNVSGTARAVLRVCSWIVAIVIFVGFMTPPFLVLF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
GVIS
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA