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The map label for this gene is ynbC [C]

Identifier: 50842906

GI number: 50842906

Start: 1545599

End: 1546732

Strand: Direct

Name: ynbC [C]

Synonym: PPA1425

Alternate gene names: 50842906

Gene position: 1545599-1546732 (Clockwise)

Preceding gene: 50842903

Following gene: 50842907

Centisome position: 60.37

GC content: 58.11

Gene sequence:

>1134_bases
ATGTCATTCCCACGCAAACTCAGCGCATTGGCGGTTGCCAGCACCATGGCGGTGACCGGCGTAACCATGGCAACTCCGGC
CCTGGCCAACACCGGCACCAGTTCCCAGCCGGCTGCAGCGACACCCGCTATCAACCAGGTCCACAAGGAGACCGGCTACT
TCAAGACGACCGATAAGCTGGGAACCCAGCTCTTCTACCGCAAGGACATCGTCCCCAACGCCAAGGGAGCTGTCGTCCTG
GTGCACGGGCTTATGGAGAACTCCTCCAACTACGAGTACCTAACCAAGAGCCTTACCAACGCTGGCTACAGCGTCTACCG
CTTCGACAATCGTGGCCATGGGCGTAGCGCAGCCCCGTACATCAACAACGCTATCCCGCGCGGCCAGTTCGACGACTGGT
GGAACATCGAGTCCGACATCCATCAGGTAGTCGGTACCGCGCACAAGGAAAATACCGGCAAGAAGGTGTTCCTGCTGGGC
CACTCAATGGGTGGAATCGCCGTACAGTCCTACGGAATCATGTATCCAGGAACTGTTGACGGCATTGTGTCCTCCGGCGG
CGGTACCATCGTCAACGTGGATGGTCCCGACACCGAGGGAGCCACCACCATCACCCCCGACAATCTCAATTTCTTTGCCC
GTCACGCCCTGCCCCAGATCAGCCAGCTTCTCCCGATGGCCCAGCTGACCAGCTTCAACGGATGCTTAGTGAAGGACTTC
GTCAAAAATCCCAAGGCGATTCGGATGCCTTCGGGTCCGTTGTCTGCTGACATCATTCTGCCCGGCTACCCGCCATACGG
CCTGTGTTCCGATCCGGCGGTCCGCTTCGACCACTGGCACCGCGACCCGCTGTACAACCATTACATGCGTCTCGGACTCG
TCGAGCAGATGGGTGTCGCCGAGGCTTACAACGTCATGAATGCCCACGATTTCAAGGCTCCAACCTTGATCATGCATGGC
GAGAACGACGGCCTGGTGCCCAGCTACTTCGATGTCAACTGGTACAACGCCATCACCTCGAAGGACAAGAAGATCATCCA
GTGGCATGGCCTCATGCATGAGATCTTCAATGAGCCCACTAAGGATCAGGTCATCAAGACCGCCATCGACTGGATCGACG
CCCACAACAAGTGA

Upstream 100 bases:

>100_bases
CCAGCTCGCCGGCAGCCTACGACGAACCTCGGGGCTCCTAGCGTACGTAGCAGTCGCCTTCGAGGATGAGGCGGCTCAAT
CGACGCAAAGGAGCATCTTG

Downstream 100 bases:

>100_bases
GCTAACCCGTCCTGATTCCGCCTGAGGTTGCGTCCCGCGATGAGTCGAGGGGACGCAACCTCTGCTGTCCCTCATCGCTT
GACCTCGCTCTTTGAATCCC

Product: putative lysophospholipase

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Hydrolase Fold Family; Acylglycerol Lipase; Hydrolase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase; Lysophospholipase Agmh; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Monoacylglycerol Lipase; Monoglyceride Lipase; Hydrolase Alpha/Beta Fold Family

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MSFPRKLSALAVASTMAVTGVTMATPALANTGTSSQPAAATPAINQVHKETGYFKTTDKLGTQLFYRKDIVPNAKGAVVL
VHGLMENSSNYEYLTKSLTNAGYSVYRFDNRGHGRSAAPYINNAIPRGQFDDWWNIESDIHQVVGTAHKENTGKKVFLLG
HSMGGIAVQSYGIMYPGTVDGIVSSGGGTIVNVDGPDTEGATTITPDNLNFFARHALPQISQLLPMAQLTSFNGCLVKDF
VKNPKAIRMPSGPLSADIILPGYPPYGLCSDPAVRFDHWHRDPLYNHYMRLGLVEQMGVAEAYNVMNAHDFKAPTLIMHG
ENDGLVPSYFDVNWYNAITSKDKKIIQWHGLMHEIFNEPTKDQVIKTAIDWIDAHNK

Sequences:

>Translated_377_residues
MSFPRKLSALAVASTMAVTGVTMATPALANTGTSSQPAAATPAINQVHKETGYFKTTDKLGTQLFYRKDIVPNAKGAVVL
VHGLMENSSNYEYLTKSLTNAGYSVYRFDNRGHGRSAAPYINNAIPRGQFDDWWNIESDIHQVVGTAHKENTGKKVFLLG
HSMGGIAVQSYGIMYPGTVDGIVSSGGGTIVNVDGPDTEGATTITPDNLNFFARHALPQISQLLPMAQLTSFNGCLVKDF
VKNPKAIRMPSGPLSADIILPGYPPYGLCSDPAVRFDHWHRDPLYNHYMRLGLVEQMGVAEAYNVMNAHDFKAPTLIMHG
ENDGLVPSYFDVNWYNAITSKDKKIIQWHGLMHEIFNEPTKDQVIKTAIDWIDAHNK
>Mature_376_residues
SFPRKLSALAVASTMAVTGVTMATPALANTGTSSQPAAATPAINQVHKETGYFKTTDKLGTQLFYRKDIVPNAKGAVVLV
HGLMENSSNYEYLTKSLTNAGYSVYRFDNRGHGRSAAPYINNAIPRGQFDDWWNIESDIHQVVGTAHKENTGKKVFLLGH
SMGGIAVQSYGIMYPGTVDGIVSSGGGTIVNVDGPDTEGATTITPDNLNFFARHALPQISQLLPMAQLTSFNGCLVKDFV
KNPKAIRMPSGPLSADIILPGYPPYGLCSDPAVRFDHWHRDPLYNHYMRLGLVEQMGVAEAYNVMNAHDFKAPTLIMHGE
NDGLVPSYFDVNWYNAITSKDKKIIQWHGLMHEIFNEPTKDQVIKTAIDWIDAHNK

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41357; Mature: 41226

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFPRKLSALAVASTMAVTGVTMATPALANTGTSSQPAAATPAINQVHKETGYFKTTDKL
CCCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEHHHH
GTQLFYRKDIVPNAKGAVVLVHGLMENSSNYEYLTKSLTNAGYSVYRFDNRGHGRSAAPY
HHHHHHHHCCCCCCCCCEEEEEEHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCH
INNAIPRGQFDDWWNIESDIHQVVGTAHKENTGKKVFLLGHSMGGIAVQSYGIMYPGTVD
HHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCEECCCCHH
GIVSSGGGTIVNVDGPDTEGATTITPDNLNFFARHALPQISQLLPMAQLTSFNGCLVKDF
HHEECCCCEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCCEEHHHH
VKNPKAIRMPSGPLSADIILPGYPPYGLCSDPAVRFDHWHRDPLYNHYMRLGLVEQMGVA
HCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHCHH
EAYNVMNAHDFKAPTLIMHGENDGLVPSYFDVNWYNAITSKDKKIIQWHGLMHEIFNEPT
HHHHHCCCCCCCCCEEEEECCCCCCCCCEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCC
KDQVIKTAIDWIDAHNK
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SFPRKLSALAVASTMAVTGVTMATPALANTGTSSQPAAATPAINQVHKETGYFKTTDKL
CCCHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEHHHH
GTQLFYRKDIVPNAKGAVVLVHGLMENSSNYEYLTKSLTNAGYSVYRFDNRGHGRSAAPY
HHHHHHHHCCCCCCCCCEEEEEEHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCH
INNAIPRGQFDDWWNIESDIHQVVGTAHKENTGKKVFLLGHSMGGIAVQSYGIMYPGTVD
HHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCEECCCCHH
GIVSSGGGTIVNVDGPDTEGATTITPDNLNFFARHALPQISQLLPMAQLTSFNGCLVKDF
HHEECCCCEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHHCCCCEEHHHH
VKNPKAIRMPSGPLSADIILPGYPPYGLCSDPAVRFDHWHRDPLYNHYMRLGLVEQMGVA
HCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHCHH
EAYNVMNAHDFKAPTLIMHGENDGLVPSYFDVNWYNAITSKDKKIIQWHGLMHEIFNEPT
HHHHHCCCCCCCCCEEEEECCCCCCCCCEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCC
KDQVIKTAIDWIDAHNK
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA