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The map label for this gene is 50842907

Identifier: 50842907

GI number: 50842907

Start: 1546949

End: 1547164

Strand: Direct

Name: 50842907

Synonym: PPA1427

Alternate gene names: NA

Gene position: 1546949-1547164 (Clockwise)

Preceding gene: 50842906

Following gene: 50842908

Centisome position: 60.42

GC content: 57.41

Gene sequence:

>216_bases
GTGGGCCTGAGTGATAAGATCAACAGCAAGAGCGACGAAGCCGTCGGCGCTGCTAAGGAGAAGATCGGTGGCCTCACCGA
TGACAGCGATCTCAAGAGCGCGGGCGCCGATCAGAAGGCCAGTGGCAAGGTAGCTCAGAAGGTCGAGGACGTCAAAGACA
AGGCGAATGACCTCAAGCACAATGTCCAGGCTGCGGCTGACAAGCTAAAGGGTTGA

Upstream 100 bases:

>100_bases
CTTTGGATACAAACCCCTAGTCGAACTTGGGTAGCCGAGTAAAATATGGGTATGTCCCTGGGCTGACCTGCGGCCCTGGG
ACCAACGAAAGGAGTGACTT

Downstream 100 bases:

>100_bases
TAATGTCGGGCCGGGCATCAGGTGCCCGGCCCGCTTCCTGCTATGACAGCACAGTCCCAGCACCGCTTTGACACCGCCAT
TGGCGAGTTAGAAGTAACAG

Product: CsbD-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MGLSDKINSKSDEAVGAAKEKIGGLTDDSDLKSAGADQKASGKVAQKVEDVKDKANDLKHNVQAAADKLKG

Sequences:

>Translated_71_residues
MGLSDKINSKSDEAVGAAKEKIGGLTDDSDLKSAGADQKASGKVAQKVEDVKDKANDLKHNVQAAADKLKG
>Mature_70_residues
GLSDKINSKSDEAVGAAKEKIGGLTDDSDLKSAGADQKASGKVAQKVEDVKDKANDLKHNVQAAADKLKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1427_PROAC (Q6A7T9)

Other databases:

- EMBL:   AE017283
- RefSeq:   YP_056134.1
- ProteinModelPortal:   Q6A7T9
- SMR:   Q6A7T9
- GeneID:   2931778
- GenomeReviews:   AE017283_GR
- KEGG:   pac:PPA1427
- HOGENOM:   HBG704474
- OMA:   TADAKHA
- ProtClustDB:   CLSK2763971
- BioCyc:   PACN267747:PPA1427-MONOMER
- InterPro:   IPR008462
- Gene3D:   G3DSA:1.10.1470.10

Pfam domain/function: PF05532 CsbD; SSF69047 CsbD

EC number: NA

Molecular weight: Translated: 7310; Mature: 7179

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSDKINSKSDEAVGAAKEKIGGLTDDSDLKSAGADQKASGKVAQKVEDVKDKANDLKH
CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
NVQAAADKLKG
HHHHHHHHCCC
>Mature Secondary Structure 
GLSDKINSKSDEAVGAAKEKIGGLTDDSDLKSAGADQKASGKVAQKVEDVKDKANDLKH
CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
NVQAAADKLKG
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA