| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is bacC [H]
Identifier: 50842768
GI number: 50842768
Start: 1395840
End: 1397579
Strand: Reverse
Name: bacC [H]
Synonym: PPA1287
Alternate gene names: 50842768
Gene position: 1397579-1395840 (Counterclockwise)
Preceding gene: 50842769
Following gene: 50842767
Centisome position: 54.59
GC content: 49.25
Gene sequence:
>1740_bases ATGCAACCGTCACATGATTTGCTGGAGGGGTTTCGTAATATAGTCATTCAGAAACCAGGTGATGTCTGTCTGACCGGTCC CGCCGGCGAGCAATGCTCATGGGAACAGCTAGTTAAAAATATCCTTGCGTGGAGAAGGTGGTTCAACCGAAAACAAAGTG AGGGCGTTACTTTTGCTGCTCGACTCGATTTATCCGCCAAGTCTGTTGCCCTTATAATAGCAGCTGTGACGTTGCCTGTC AAGATTGCTTGGATTCCGTTGAATATTCCGGCTTCACGAGAGCGGGACATGATTATTAATCTTGGGCCTAAAACGGTTCT GATCGACGACTCAACAGCGGAAGAAGCGATTTTTGCAGGGAACTGGATAAGTGATGTCAGGTCCTTGACCTGGAGCGGTA AATCAAAATTCTTATATTTCACATCTGGATCAGAAGGAGTTCCGAAAGCCGTCCAAGTAGGAATGGATGCGGTGCGGAAC CGTATCACGTGGATGTGGAACGCCTACCCTTACGAGTCAAGCGATCTTGTGGTCGTCCAGAAGCCACTCTCATTTGTTGC TTCATTTTGGGAAGTGTTGGGGACTCTGCTGGCAGGTGTTACTGGTGTTTTGATTACTAATATCGAGCGTAGCAGACCTG ACGTGATGTTCGATCGACTTGCGTCTAGTGGTGCTACCCACCTTTTTACGACACCTCCAGCACTAGCCAGCTTGTGTGAC ATTGCCACAGAGCAAGGGAGCACTCTTCCTCAGCTCCGTCTAGCGTGCAGCAGTGCAGACCAGCTGATGGCAAGCGTTGT CCGTCAATTCTTCGAGATCGCGCCCCGTGCGCGAGTAGTGAATCTTTACGGAGCTACTGAGACGTCGGCTAACACAACAA GTTTCGAGGTTTCTCGGTCAGGTAGCATTCCGGACCCTATCCCCCTTGGCGAGCCGATCTGTGCTACGAAAATTGTAATT CGGGACATGAAAGGTAACGAAAAGTTATCTGGGGAAGAGGGGCAGATATGCGTACAGGGTGCCCCAGTGGCCGATGGATA TATCGTTAATGGTCAACTCAGTCCAGGGGACGATGCGTTCTTTACACTTGGAAGTGGACAACGTGAAATACGGACTGGTG ATCTGGGAATCATCAAGGATGGTGTCCTTTCACTGGTTGGCAGGCTCGATAATGCGGTAAATATCGCTGGATACAAGATC CACTTGGAAGAGGTTGAAAGAGCTGCAGCTCGAGTTGCTAACTCCACGAAACAATGTGGTGCAGTTTATCACCAAGGCAG TGGTGGATTTTTGGCGCTCGTGATTCCACGCGAATGGGAATCTCAGGTCACGACTTCTCGTCTTGCCGAATTTCTACCTT CCTATATGATTCCTCTCAAGATCGTAACTACGCAGAATGTTCCTAGATCAAGAACGGGAAAAATCGATCGGAGCGAGTGC CTGAAATTGGTAACACAGAGCGAACTCTACGATCACGACAGAATATCCCAAGGACAAATGCAGCGTAACAGTGTTCACGA TCAAGTGCAAAATATCTGGGATATGGTCCTTGGAAAGAAGAGCCACGGTGAAGATCGTGATTTTTTCTCCGCAGGTGGAA ATTCGTTGCGCGCTGTTCAGCTTTTGACCGCCATCGGTAAACAGTTTGGTGTTCGTGTCCCCTTGCGGAACTTCTATTCC AATCCAACGATTTCCTGCTTGGTCAGCTTGCTGATGCCTGTTGAGGAGCGCGAGCAGTGA
Upstream 100 bases:
>100_bases ACGACTGTCGCTAATGCCATAAAAACTGCCCTTAATGATTGTGATACATCTCAGATAACAATGCTCAAAAGCTATTGATG TAGTATGAAGGGAAATAAAG
Downstream 100 bases:
>100_bases ATCCGGAAGTTTGGCAGCGTATTAGTTCAGCAACTACCTCTTGTTGCTCCACAGTCCTGATATTCCCTCCTACGGGTGCC GGAGCTCCTGCCTTTCAATC
Product: non-ribosomal peptide synthetase
Products: NA
Alternate protein names: BA3; ATP-dependent isoleucine adenylase; IleA; Isoleucine activase; ATP-dependent D-phenylalanine adenylase; D-PheA; D-phenylalanine activase; ATP-dependent histidine adenylase; HisA; Histidine activase; ATP-dependent D-aspartate adenylase; D-AspA; D-aspartate activase; ATP-dependent asparagine adenylase; AsnA; Asparagine activase; Aspartate racemase; Phenylalanine racemase [ATP hydrolyzing] [H]
Number of amino acids: Translated: 579; Mature: 579
Protein sequence:
>579_residues MQPSHDLLEGFRNIVIQKPGDVCLTGPAGEQCSWEQLVKNILAWRRWFNRKQSEGVTFAARLDLSAKSVALIIAAVTLPV KIAWIPLNIPASRERDMIINLGPKTVLIDDSTAEEAIFAGNWISDVRSLTWSGKSKFLYFTSGSEGVPKAVQVGMDAVRN RITWMWNAYPYESSDLVVVQKPLSFVASFWEVLGTLLAGVTGVLITNIERSRPDVMFDRLASSGATHLFTTPPALASLCD IATEQGSTLPQLRLACSSADQLMASVVRQFFEIAPRARVVNLYGATETSANTTSFEVSRSGSIPDPIPLGEPICATKIVI RDMKGNEKLSGEEGQICVQGAPVADGYIVNGQLSPGDDAFFTLGSGQREIRTGDLGIIKDGVLSLVGRLDNAVNIAGYKI HLEEVERAAARVANSTKQCGAVYHQGSGGFLALVIPREWESQVTTSRLAEFLPSYMIPLKIVTTQNVPRSRTGKIDRSEC LKLVTQSELYDHDRISQGQMQRNSVHDQVQNIWDMVLGKKSHGEDRDFFSAGGNSLRAVQLLTAIGKQFGVRVPLRNFYS NPTISCLVSLLMPVEEREQ
Sequences:
>Translated_579_residues MQPSHDLLEGFRNIVIQKPGDVCLTGPAGEQCSWEQLVKNILAWRRWFNRKQSEGVTFAARLDLSAKSVALIIAAVTLPV KIAWIPLNIPASRERDMIINLGPKTVLIDDSTAEEAIFAGNWISDVRSLTWSGKSKFLYFTSGSEGVPKAVQVGMDAVRN RITWMWNAYPYESSDLVVVQKPLSFVASFWEVLGTLLAGVTGVLITNIERSRPDVMFDRLASSGATHLFTTPPALASLCD IATEQGSTLPQLRLACSSADQLMASVVRQFFEIAPRARVVNLYGATETSANTTSFEVSRSGSIPDPIPLGEPICATKIVI RDMKGNEKLSGEEGQICVQGAPVADGYIVNGQLSPGDDAFFTLGSGQREIRTGDLGIIKDGVLSLVGRLDNAVNIAGYKI HLEEVERAAARVANSTKQCGAVYHQGSGGFLALVIPREWESQVTTSRLAEFLPSYMIPLKIVTTQNVPRSRTGKIDRSEC LKLVTQSELYDHDRISQGQMQRNSVHDQVQNIWDMVLGKKSHGEDRDFFSAGGNSLRAVQLLTAIGKQFGVRVPLRNFYS NPTISCLVSLLMPVEEREQ >Mature_579_residues MQPSHDLLEGFRNIVIQKPGDVCLTGPAGEQCSWEQLVKNILAWRRWFNRKQSEGVTFAARLDLSAKSVALIIAAVTLPV KIAWIPLNIPASRERDMIINLGPKTVLIDDSTAEEAIFAGNWISDVRSLTWSGKSKFLYFTSGSEGVPKAVQVGMDAVRN RITWMWNAYPYESSDLVVVQKPLSFVASFWEVLGTLLAGVTGVLITNIERSRPDVMFDRLASSGATHLFTTPPALASLCD IATEQGSTLPQLRLACSSADQLMASVVRQFFEIAPRARVVNLYGATETSANTTSFEVSRSGSIPDPIPLGEPICATKIVI RDMKGNEKLSGEEGQICVQGAPVADGYIVNGQLSPGDDAFFTLGSGQREIRTGDLGIIKDGVLSLVGRLDNAVNIAGYKI HLEEVERAAARVANSTKQCGAVYHQGSGGFLALVIPREWESQVTTSRLAEFLPSYMIPLKIVTTQNVPRSRTGKIDRSEC LKLVTQSELYDHDRISQGQMQRNSVHDQVQNIWDMVLGKKSHGEDRDFFSAGGNSLRAVQLLTAIGKQFGVRVPLRNFYS NPTISCLVSLLMPVEEREQ
Specific function: Induces peptide synthesis, activates and incorporates five amino acids, forms a thiazoline ring between the first two amino acids and incoporates a D-glutamine in the fourth position [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 5 acyl carrier domains [H]
Homologues:
Organism=Homo sapiens, GI45580730, Length=432, Percent_Identity=23.3796296296296, Blast_Score=102, Evalue=1e-21, Organism=Escherichia coli, GI1786801, Length=520, Percent_Identity=25, Blast_Score=135, Evalue=7e-33, Organism=Escherichia coli, GI1788107, Length=397, Percent_Identity=23.1738035264484, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17550940, Length=424, Percent_Identity=23.3490566037736, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI32564422, Length=492, Percent_Identity=21.9512195121951, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI32564420, Length=492, Percent_Identity=21.9512195121951, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17556356, Length=448, Percent_Identity=24.3303571428571, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648676, Length=522, Percent_Identity=27.3946360153257, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI24582852, Length=449, Percent_Identity=23.6080178173719, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR010060 - InterPro: IPR006163 - InterPro: IPR020806 - InterPro: IPR006162 - InterPro: IPR001031 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding; PF00975 Thioesterase [H]
EC number: =5.1.1.13; =5.1.1.11 [H]
Molecular weight: Translated: 63429; Mature: 63429
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50075 ACP_DOMAIN ; PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPSHDLLEGFRNIVIQKPGDVCLTGPAGEQCSWEQLVKNILAWRRWFNRKQSEGVTFAA CCCCHHHHHHHHHHEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE RLDLSAKSVALIIAAVTLPVKIAWIPLNIPASRERDMIINLGPKTVLIDDSTAEEAIFAG EECCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEECCCEEEECCCCCCHHEECC NWISDVRSLTWSGKSKFLYFTSGSEGVPKAVQVGMDAVRNRITWMWNAYPYESSDLVVVQ CHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEE KPLSFVASFWEVLGTLLAGVTGVLITNIERSRPDVMFDRLASSGATHLFTTPPALASLCD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHH IATEQGSTLPQLRLACSSADQLMASVVRQFFEIAPRARVVNLYGATETSANTTSFEVSRS HHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECC GSIPDPIPLGEPICATKIVIRDMKGNEKLSGEEGQICVQGAPVADGYIVNGQLSPGDDAF CCCCCCCCCCCCHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCE FTLGSGQREIRTGDLGIIKDGVLSLVGRLDNAVNIAGYKIHLEEVERAAARVANSTKQCG EEECCCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHCCHHHHC AVYHQGSGGFLALVIPREWESQVTTSRLAEFLPSYMIPLKIVTTQNVPRSRTGKIDRSEC CEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHH LKLVTQSELYDHDRISQGQMQRNSVHDQVQNIWDMVLGKKSHGEDRDFFSAGGNSLRAVQ HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHH LLTAIGKQFGVRVPLRNFYSNPTISCLVSLLMPVEEREQ HHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHCCHHHCCC >Mature Secondary Structure MQPSHDLLEGFRNIVIQKPGDVCLTGPAGEQCSWEQLVKNILAWRRWFNRKQSEGVTFAA CCCCHHHHHHHHHHEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE RLDLSAKSVALIIAAVTLPVKIAWIPLNIPASRERDMIINLGPKTVLIDDSTAEEAIFAG EECCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEECCCEEEECCCCCCHHEECC NWISDVRSLTWSGKSKFLYFTSGSEGVPKAVQVGMDAVRNRITWMWNAYPYESSDLVVVQ CHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEE KPLSFVASFWEVLGTLLAGVTGVLITNIERSRPDVMFDRLASSGATHLFTTPPALASLCD CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHH IATEQGSTLPQLRLACSSADQLMASVVRQFFEIAPRARVVNLYGATETSANTTSFEVSRS HHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECC GSIPDPIPLGEPICATKIVIRDMKGNEKLSGEEGQICVQGAPVADGYIVNGQLSPGDDAF CCCCCCCCCCCCHHHHHHHEEECCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCE FTLGSGQREIRTGDLGIIKDGVLSLVGRLDNAVNIAGYKIHLEEVERAAARVANSTKQCG EEECCCCCEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHCCHHHHC AVYHQGSGGFLALVIPREWESQVTTSRLAEFLPSYMIPLKIVTTQNVPRSRTGKIDRSEC CEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHH LKLVTQSELYDHDRISQGQMQRNSVHDQVQNIWDMVLGKKSHGEDRDFFSAGGNSLRAVQ HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHH LLTAIGKQFGVRVPLRNFYSNPTISCLVSLLMPVEEREQ HHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9427658 [H]