| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is hisD
Identifier: 50842632
GI number: 50842632
Start: 1253641
End: 1254960
Strand: Direct
Name: hisD
Synonym: PPA1152
Alternate gene names: 50842632
Gene position: 1253641-1254960 (Clockwise)
Preceding gene: 50842631
Following gene: 50842633
Centisome position: 48.97
GC content: 61.97
Gene sequence:
>1320_bases GTGCTGAGAATCGTCGATGTGACCAGTGAGACCACTGACGACCTGCGTTGCGCCGTGCCTCGCGCGGACTTCGATGTCGA TGCCGCCATGGCGGCCGTCATCCCTGTCTGCTCCGCGGTGAGGGATCGTGGCGTTGAGGCGCTACGTGAGTACAGCGAGA AATTCGACCATGTGGTTCCCGAGCATCTGCGCGTTCCGGTCGAGGCTCTCGCCACGGCAGCTGCGAACCTCGACGGCACC TTGCGTCGGGCTTTCAGCGAATCTATTCGACGTCGTCGTCAGGTATGTCAGGAAGCTGAGGTGGAGACCTCGTCCCAACC GGTTGAGGTGGCAGGTGGCGCGCGGGTGAGCCAGCGCATCGTCCCGGTCGGGCGTGTAGGCCTTTACGTTCCGGGTGGGT TCGCTCCGCTGGCATCGTCGGTCATCATGAACGTCGTTCCTGCGCAGGAGGCCGGTGTCTCGTCTATCGCTGTAGCATCT CCGCCCCAGGCGGAGTTTGGTGGGTTGCCGCACCCGAGCATCTTGGCGCTGTGTCATCTACTGGGTGTCAATGAGGTCTA CGCCGTTGGTGGCGCCCAGGCGATCGCCATGTTCGCTTACGGTGTTGAGGGCTCCGACGAGGCAGATTCCTGTCCGCGCG TCGACATGGTTACGGGTCCAGGCAACATCTACGTAGTCGCGGCAAAGCGCTGCCTGCGTGGCACCGTCGGCATCGATTCG GAGGCTGGGCCCACCGAAATCGCCATCCTGGCCGATGAGACTGCTGACCCGCGTCACATTGCTGCTGATCTTATGAGCCA GGCTGAGCACGACACGCTGGCTGCCGCAGTGCTTGTCACAGACTCGACCACACTGGCCGAAGCTGTGCAACGAGAACTTG CCCCGATGGTCAGTGCCACCTTACATTCCGAGCGCATTCGCACCTCGCTGACATCCAAGCAGTCGGCCATCGTCATGGTA CGTGATATTGATCAGGGCCTCGAAGTGGTCAATGCGTATGCCGCCGAGCATCTCGAGATCCAGACGGCCGATGCTGCCGC AGTCGCTGCTCGGGTCTGGAACGCTGGCGCCATTTTCGTCGGCCCATGGGCGCCTGTCTCTCTTGGGGATTACTCAGCCG GATCCACTCACGTCCTTCCCACGGCAGGAGCAGCCTGCCACTCGTCTGGTCTGTCGGTGCGTTCCTTCATGCGCGCCGTC CACGTGATCGACTACACCGAGGATGCCCTACTCGAACTGGCCGATTCCGTTGAGGCTTTTGCCTTGGCGGAGAATTTGCC CGGCCATGCCAATGCCATCACTGTGAGGAGGTCACGTTGA
Upstream 100 bases:
>100_bases ATGGTGCCCATGCTCATCGCCTCCCTGCTGGCGGCCAGACGTGGCGCTTCGCGGACCGGACGCGCAAAGACGTCGACCGG GGCTTCATTAGACTAGCAAT
Downstream 100 bases:
>100_bases CTCAACATCGACAGACCAGCCAGCCCCGTCCGGTGGCTAAGCCGGAGCCTAACTCTATCCAGTTGGCGGATCTTCCGCTG CGCTCCGAACTTGTCGGGGC
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MLRIVDVTSETTDDLRCAVPRADFDVDAAMAAVIPVCSAVRDRGVEALREYSEKFDHVVPEHLRVPVEALATAAANLDGT LRRAFSESIRRRRQVCQEAEVETSSQPVEVAGGARVSQRIVPVGRVGLYVPGGFAPLASSVIMNVVPAQEAGVSSIAVAS PPQAEFGGLPHPSILALCHLLGVNEVYAVGGAQAIAMFAYGVEGSDEADSCPRVDMVTGPGNIYVVAAKRCLRGTVGIDS EAGPTEIAILADETADPRHIAADLMSQAEHDTLAAAVLVTDSTTLAEAVQRELAPMVSATLHSERIRTSLTSKQSAIVMV RDIDQGLEVVNAYAAEHLEIQTADAAAVAARVWNAGAIFVGPWAPVSLGDYSAGSTHVLPTAGAACHSSGLSVRSFMRAV HVIDYTEDALLELADSVEAFALAENLPGHANAITVRRSR
Sequences:
>Translated_439_residues MLRIVDVTSETTDDLRCAVPRADFDVDAAMAAVIPVCSAVRDRGVEALREYSEKFDHVVPEHLRVPVEALATAAANLDGT LRRAFSESIRRRRQVCQEAEVETSSQPVEVAGGARVSQRIVPVGRVGLYVPGGFAPLASSVIMNVVPAQEAGVSSIAVAS PPQAEFGGLPHPSILALCHLLGVNEVYAVGGAQAIAMFAYGVEGSDEADSCPRVDMVTGPGNIYVVAAKRCLRGTVGIDS EAGPTEIAILADETADPRHIAADLMSQAEHDTLAAAVLVTDSTTLAEAVQRELAPMVSATLHSERIRTSLTSKQSAIVMV RDIDQGLEVVNAYAAEHLEIQTADAAAVAARVWNAGAIFVGPWAPVSLGDYSAGSTHVLPTAGAACHSSGLSVRSFMRAV HVIDYTEDALLELADSVEAFALAENLPGHANAITVRRSR >Mature_439_residues MLRIVDVTSETTDDLRCAVPRADFDVDAAMAAVIPVCSAVRDRGVEALREYSEKFDHVVPEHLRVPVEALATAAANLDGT LRRAFSESIRRRRQVCQEAEVETSSQPVEVAGGARVSQRIVPVGRVGLYVPGGFAPLASSVIMNVVPAQEAGVSSIAVAS PPQAEFGGLPHPSILALCHLLGVNEVYAVGGAQAIAMFAYGVEGSDEADSCPRVDMVTGPGNIYVVAAKRCLRGTVGIDS EAGPTEIAILADETADPRHIAADLMSQAEHDTLAAAVLVTDSTTLAEAVQRELAPMVSATLHSERIRTSLTSKQSAIVMV RDIDQGLEVVNAYAAEHLEIQTADAAAVAARVWNAGAIFVGPWAPVSLGDYSAGSTHVLPTAGAACHSSGLSVRSFMRAV HVIDYTEDALLELADSVEAFALAENLPGHANAITVRRSR
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=444, Percent_Identity=36.4864864864865, Blast_Score=254, Evalue=6e-69, Organism=Saccharomyces cerevisiae, GI6319819, Length=423, Percent_Identity=36.1702127659575, Blast_Score=230, Evalue=3e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX_PROAC (Q6A8L5)
Other databases:
- EMBL: AE017283 - RefSeq: YP_055859.1 - ProteinModelPortal: Q6A8L5 - SMR: Q6A8L5 - GeneID: 2932004 - GenomeReviews: AE017283_GR - KEGG: pac:PPA1152 - NMPDR: fig|267747.1.peg.1136 - HOGENOM: HBG329596 - OMA: LDAHKNA - ProtClustDB: PRK00877 - BioCyc: PACN267747:PPA1152-MONOMER - BRENDA: 1.1.1.23 - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PIRSF: PIRSF000099 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 46099; Mature: 46099
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: ACT_SITE 336-336 ACT_SITE 337-337 BINDING 129-129 BINDING 193-193 BINDING 222-222 BINDING 245-245 BINDING 267-267 BINDING 270-270 BINDING 337-337 BINDING 370-370 BINDING 424-424 BINDING 429-429
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIVDVTSETTDDLRCAVPRADFDVDAAMAAVIPVCSAVRDRGVEALREYSEKFDHVVP CEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCH EHLRVPVEALATAAANLDGTLRRAFSESIRRRRQVCQEAEVETSSQPVEVAGGARVSQRI HHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHC VPVGRVGLYVPGGFAPLASSVIMNVVPAQEAGVSSIAVASPPQAEFGGLPHPSILALCHL CCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHCCCCCCHHHHHHHHH LGVNEVYAVGGAQAIAMFAYGVEGSDEADSCPRVDMVTGPGNIYVVAAKRCLRGTVGIDS HCCCHHHHCCCHHEEEHEEECCCCCCCCCCCCCEEEEECCCCEEEEEEHHHHCCCCCCCC EAGPTEIAILADETADPRHIAADLMSQAEHDTLAAAVLVTDSTTLAEAVQRELAPMVSAT CCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHEEEEEEEECCHHHHHHHHHHHHHHHHHH LHSERIRTSLTSKQSAIVMVRDIDQGLEVVNAYAAEHLEIQTADAAAVAARVWNAGAIFV HHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCEEEE GPWAPVSLGDYSAGSTHVLPTAGAACHSSGLSVRSFMRAVHVIDYTEDALLELADSVEAF CCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH ALAENLPGHANAITVRRSR HHHHCCCCCCCEEEEEECC >Mature Secondary Structure MLRIVDVTSETTDDLRCAVPRADFDVDAAMAAVIPVCSAVRDRGVEALREYSEKFDHVVP CEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCH EHLRVPVEALATAAANLDGTLRRAFSESIRRRRQVCQEAEVETSSQPVEVAGGARVSQRI HHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHC VPVGRVGLYVPGGFAPLASSVIMNVVPAQEAGVSSIAVASPPQAEFGGLPHPSILALCHL CCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHCCCCCCHHHHHHHHH LGVNEVYAVGGAQAIAMFAYGVEGSDEADSCPRVDMVTGPGNIYVVAAKRCLRGTVGIDS HCCCHHHHCCCHHEEEHEEECCCCCCCCCCCCCEEEEECCCCEEEEEEHHHHCCCCCCCC EAGPTEIAILADETADPRHIAADLMSQAEHDTLAAAVLVTDSTTLAEAVQRELAPMVSAT CCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHEEEEEEEECCHHHHHHHHHHHHHHHHHH LHSERIRTSLTSKQSAIVMVRDIDQGLEVVNAYAAEHLEIQTADAAAVAARVWNAGAIFV HHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHCCCEEEE GPWAPVSLGDYSAGSTHVLPTAGAACHSSGLSVRSFMRAVHVIDYTEDALLELADSVEAF CCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH ALAENLPGHANAITVRRSR HHHHCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA