Click here to switch to the map view.

The map label for this gene is cbg-1 [H]

Identifier: 50842476

GI number: 50842476

Start: 1076718

End: 1076963

Strand: Reverse

Name: cbg-1 [H]

Synonym: PPA0992

Alternate gene names: 50842476

Gene position: 1076963-1076718 (Counterclockwise)

Preceding gene: 50842477

Following gene: 50842472

Centisome position: 42.06

GC content: 65.04

Gene sequence:

>246_bases
GTGCTAACCGTCACCTTCACCGTCTCCAACACCGGAGACCGCGCCGGCGCTGCTGTGCCTCAGGTCTACCCGGGTTTCCC
CAACACCACCATTGACCGCTGCGTGCGCGAGCTCAAAGCCTTCCGTCGTGTGGAACTAGAGCCCGGCCAGAGGCAGACGG
TCACCGTCGCGCTGACCCGGCGCGACCTGTCCTACTGGGACATCCTGCCGCACCCCCTACGGAGCTATGCCGTAGGCAGC
ATATGA

Upstream 100 bases:

>100_bases
TACCCCTTCGGTCACGGCCTGAGCTACACCAACTTCGCCTACCCCGGCCTTGATCTAGCCATCTGCCCTGTCACCGAGTC
CACCGGGGCAAGACAAACCA

Downstream 100 bases:

>100_bases
AAGAAGACGGGTCAGCGCCGCCCGCCGCGCGGGCGCACAATTTTGTGGGCTTGCCAGTCCTTACTAACGTCGTAGCTGGT
GGTCAGCACCATTCCAGCGG

Product: beta-glucosidase fragment

Products: NA

Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MLTVTFTVSNTGDRAGAAVPQVYPGFPNTTIDRCVRELKAFRRVELEPGQRQTVTVALTRRDLSYWDILPHPLRSYAVGS
I

Sequences:

>Translated_81_residues
MLTVTFTVSNTGDRAGAAVPQVYPGFPNTTIDRCVRELKAFRRVELEPGQRQTVTVALTRRDLSYWDILPHPLRSYAVGS
I
>Mature_81_residues
MLTVTFTVSNTGDRAGAAVPQVYPGFPNTTIDRCVRELKAFRRVELEPGQRQTVTVALTRRDLSYWDILPHPLRSYAVGS
I

Specific function: Involved in modifying a vir-inducing plant signal molecule. Hydrolyzes coniferin but not cellobiose [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019800
- InterPro:   IPR002772
- InterPro:   IPR001764
- InterPro:   IPR017853
- InterPro:   IPR011658 [H]

Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]

EC number: =3.2.1.21 [H]

Molecular weight: Translated: 9078; Mature: 9078

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTVTFTVSNTGDRAGAAVPQVYPGFPNTTIDRCVRELKAFRRVELEPGQRQTVTVALTR
CEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC
RDLSYWDILPHPLRSYAVGSI
CCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MLTVTFTVSNTGDRAGAAVPQVYPGFPNTTIDRCVRELKAFRRVELEPGQRQTVTVALTR
CEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC
RDLSYWDILPHPLRSYAVGSI
CCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1537792 [H]