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The map label for this gene is cdaR [C]

Identifier: 50842472

GI number: 50842472

Start: 1070881

End: 1072122

Strand: Reverse

Name: cdaR [C]

Synonym: PPA0988

Alternate gene names: 50842472

Gene position: 1072122-1070881 (Counterclockwise)

Preceding gene: 50842476

Following gene: 50842470

Centisome position: 41.88

GC content: 61.76

Gene sequence:

>1242_bases
GTGGCCAGGAATGACATCGGGACGACGTCTACGCGTCGAATAGGCAGCGGACGTACGTCGAGTACCGGCCGTACGGTGGT
GTCTTCTGACCGCACACGCAGAGCTATCGCTAAAAGATTGATGGCCCGCACCTCAGCTATGACGACGGCCACTCTAGAGG
AAATGGGTCGTCGACACTCCTGGTTCCGTGATCTGTCAGCCGAAGAAAGATCGTGGATCTCGATCGTGGCTCGCTCAGGT
ATTGACGGCTTCGTCCAGTGGTTTGCTGACGATGACGCCGAGCCCTACTCCCCCACCGACGTCTTCGACGTGGCGCCCCG
GTCCATGACCCGCAAGATCTCCTTGCACCAGACAGTCGAGCTCGTCCGCACCACGATCGACGTCGTTGAGGCACAAATTG
AGACCGAAATGCCGCGCGGCGATCGCCAAGTGCTGCGCACTGCCATCGTCCACTACTCCCGCGAGGTGGCCTTCGCCGCC
GCCGAGGTTTACGCGCGAGCCGCCGAACGTCGCGGTACCTGGGATGAACGTCTGGAATCCCTCGTCGTTGATGCGGTCGT
GCGCGCCGACGCCGATGAACAGCTCATCTCGCGAGCTTCCACTCTCGGCTGGCGCCCGGGCATCAATCTCTGCGTCGTCG
TCGGACGGGCCCCGACGACCGAGCATGAACTCCACGTGCTGCGACGTGATGGCGAACGCATGCAGATGACGGTGCTAGCC
GCCGTACAGTCCGACCGGTTAGTTGTCATTTTGGCCGGTGAGAAACTGGTTGACGATCCAGCAGCCGTAGCCGCAAGCGA
AGCTCTCGCAAACCACTTCGCGCCAGGACCAATCGTCGTCGGACCCGTCGTGGCCGACCTCACACTGGCCCCGGCATCCG
CTCGTGCCGCCCTCTCCGGAATACGTGCGGCACGAGCTTGGCCGGAAGGTCCGCAAGTCATGGCAGCCGTCGACTTATTG
CCCGAGCAAGTCCTCTCCGGTGATACAGATGCCATTGCGTGGCTCGTCAACGAGGTCTACAGCCCCCTCGCGACAGCCAG
TGGAGACCTCATGGACACAACTGTCTCCTTCCTCGATCACGGCTGCTCAGTGGAAGGCACGGGTCGGGCGATGTTCATTC
ACCCCAACACCGTGCGCTACCGACTTAAACGAATCCAAGACGTCACTGGCTACTCCCCGTCGGATCCTCGAGAAGCCTAT
GTGCTGCGCCTAGCAATCACTTTGGGGCGGCTGAGGAGCTGA

Upstream 100 bases:

>100_bases
CAGCGCCTCATCCCCCGAATCTGTTCGCCATCTGCTGTCGCCCCTGCGCTTAAGGCATCACCCCACTAGACTGACCGAAG
TCTCGCCGAGGGAGGCTTAG

Downstream 100 bases:

>100_bases
CGCCGTGAACCCATCTCGCATCTCGCACTCACCCCATCGAAGGCGAGTCAGCCTTGGGCCACCGAGCACCGTTGTTCCAA
TAGTCCTGGATCTCCTCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MARNDIGTTSTRRIGSGRTSSTGRTVVSSDRTRRAIAKRLMARTSAMTTATLEEMGRRHSWFRDLSAEERSWISIVARSG
IDGFVQWFADDDAEPYSPTDVFDVAPRSMTRKISLHQTVELVRTTIDVVEAQIETEMPRGDRQVLRTAIVHYSREVAFAA
AEVYARAAERRGTWDERLESLVVDAVVRADADEQLISRASTLGWRPGINLCVVVGRAPTTEHELHVLRRDGERMQMTVLA
AVQSDRLVVILAGEKLVDDPAAVAASEALANHFAPGPIVVGPVVADLTLAPASARAALSGIRAARAWPEGPQVMAAVDLL
PEQVLSGDTDAIAWLVNEVYSPLATASGDLMDTTVSFLDHGCSVEGTGRAMFIHPNTVRYRLKRIQDVTGYSPSDPREAY
VLRLAITLGRLRS

Sequences:

>Translated_413_residues
MARNDIGTTSTRRIGSGRTSSTGRTVVSSDRTRRAIAKRLMARTSAMTTATLEEMGRRHSWFRDLSAEERSWISIVARSG
IDGFVQWFADDDAEPYSPTDVFDVAPRSMTRKISLHQTVELVRTTIDVVEAQIETEMPRGDRQVLRTAIVHYSREVAFAA
AEVYARAAERRGTWDERLESLVVDAVVRADADEQLISRASTLGWRPGINLCVVVGRAPTTEHELHVLRRDGERMQMTVLA
AVQSDRLVVILAGEKLVDDPAAVAASEALANHFAPGPIVVGPVVADLTLAPASARAALSGIRAARAWPEGPQVMAAVDLL
PEQVLSGDTDAIAWLVNEVYSPLATASGDLMDTTVSFLDHGCSVEGTGRAMFIHPNTVRYRLKRIQDVTGYSPSDPREAY
VLRLAITLGRLRS
>Mature_412_residues
ARNDIGTTSTRRIGSGRTSSTGRTVVSSDRTRRAIAKRLMARTSAMTTATLEEMGRRHSWFRDLSAEERSWISIVARSGI
DGFVQWFADDDAEPYSPTDVFDVAPRSMTRKISLHQTVELVRTTIDVVEAQIETEMPRGDRQVLRTAIVHYSREVAFAAA
EVYARAAERRGTWDERLESLVVDAVVRADADEQLISRASTLGWRPGINLCVVVGRAPTTEHELHVLRRDGERMQMTVLAA
VQSDRLVVILAGEKLVDDPAAVAASEALANHFAPGPIVVGPVVADLTLAPASARAALSGIRAARAWPEGPQVMAAVDLLP
EQVLSGDTDAIAWLVNEVYSPLATASGDLMDTTVSFLDHGCSVEGTGRAMFIHPNTVRYRLKRIQDVTGYSPSDPREAYV
LRLAITLGRLRS

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45156; Mature: 45025

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARNDIGTTSTRRIGSGRTSSTGRTVVSSDRTRRAIAKRLMARTSAMTTATLEEMGRRHS
CCCCCCCCCCHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFRDLSAEERSWISIVARSGIDGFVQWFADDDAEPYSPTDVFDVAPRSMTRKISLHQTVE
HHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHH
LVRTTIDVVEAQIETEMPRGDRQVLRTAIVHYSREVAFAAAEVYARAAERRGTWDERLES
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LVVDAVVRADADEQLISRASTLGWRPGINLCVVVGRAPTTEHELHVLRRDGERMQMTVLA
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHEEHEEE
AVQSDRLVVILAGEKLVDDPAAVAASEALANHFAPGPIVVGPVVADLTLAPASARAALSG
EECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHEECCHHHHHHHHH
IRAARAWPEGPQVMAAVDLLPEQVLSGDTDAIAWLVNEVYSPLATASGDLMDTTVSFLDH
HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
GCSVEGTGRAMFIHPNTVRYRLKRIQDVTGYSPSDPREAYVLRLAITLGRLRS
CCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARNDIGTTSTRRIGSGRTSSTGRTVVSSDRTRRAIAKRLMARTSAMTTATLEEMGRRHS
CCCCCCCCCHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFRDLSAEERSWISIVARSGIDGFVQWFADDDAEPYSPTDVFDVAPRSMTRKISLHQTVE
HHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHH
LVRTTIDVVEAQIETEMPRGDRQVLRTAIVHYSREVAFAAAEVYARAAERRGTWDERLES
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LVVDAVVRADADEQLISRASTLGWRPGINLCVVVGRAPTTEHELHVLRRDGERMQMTVLA
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHEEHEEE
AVQSDRLVVILAGEKLVDDPAAVAASEALANHFAPGPIVVGPVVADLTLAPASARAALSG
EECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHEECCHHHHHHHHH
IRAARAWPEGPQVMAAVDLLPEQVLSGDTDAIAWLVNEVYSPLATASGDLMDTTVSFLDH
HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
GCSVEGTGRAMFIHPNTVRYRLKRIQDVTGYSPSDPREAYVLRLAITLGRLRS
CCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]