| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is mutA [H]
Identifier: 50842081
GI number: 50842081
Start: 657197
End: 659107
Strand: Direct
Name: mutA [H]
Synonym: PPA0595
Alternate gene names: 50842081
Gene position: 657197-659107 (Clockwise)
Preceding gene: 50842078
Following gene: 50842082
Centisome position: 25.67
GC content: 61.17
Gene sequence:
>1911_bases ATGACTGATCCTGACAACCTCGCATCCAAGTCCGTCGAGGACAGGATGCCTGAGGAGTTGAGCCTGGCCGGGGACTTCCC GAAGGTCACCCACGAGCAGTGGGAGGAGGCGGTCCTTAAGGTTCTGAACCGGGGTCGTCCCGAGGGCAAGGAACTCAACA TCGAGCAGGGAATGAAGCGCCTCGAGCCGACTACGGTCGACGGCATCCAGATCGAGCCGATGTACCGGCGTCAGGATGCC CCCGAGAAGCTCGGTGTTCCGGGCGTGCCGCCGTTCACTCGTGGTACCACGATCCGTGAAGGCGGCATGGATGCATGGGA TGTCCGGGCCCTTCATGAGGATCCCGATGTCGCGTTCACTAAAAAGGCCGTTATCGCCGACCTTGAGCGTGGCGTGACGT CCCTGTGGCTGCGGGTCGGGGCTGACGCCATTAAGCCCGAGGACATTGCGGGTGACCTCAAGGATGTGTTGCTCGACCTG GCCAAGGTTGAGGTCTCTAGCCGTGATGACCAGGAGGCCGCTGCTCAGGCTCTCCTTGATGTTTACATTGAGTCCAAGAT CGATGCTGACAAGCTGTCGTTTAACCTCGGTCTGGACCCCATCGGTTTTGCGGCCCTTAATGGCGGTAACCCAGACTTGT CCGGGATGGCCGAGTGGGTCAAGAAGACCGAGAATTACAAGAACTCCCGCCCCTTCGTCGTTGACGCCACGATCTACCAC AACGCCGGTGCTGGCGACGTGCACGAACTCGCGTGGGCTGTCGCGACCGGCGTTGAGTACGTCCGAGCTTTCATTGAGCA GGGGCTGACAGCTGAGCAGGCCTTCGATTCCATCAACTTCCGCGTCACGGCCACCCACGACGAGTTCCTCACTATTTCCC GTCTGCGTGCCCTACGTACCTTGTGGAACCGTGTTGGCGAGGTCTTCGAGGTACCGGCTGCTAAGCGTGGTGCCCGTCAA GAAGCGGTCACCAGCTGGCGCGAGCTCACTCGCGACGATCCTTACGTCAATATCCTTCGTGGCACGATCGCAACCTTCGG TGCTGCTGTCGGTGGCGCTGAGGCGGTCACGACCTTGCCTTTCGACGCCGCTATTGGTTTACCGAAGAGTGACTTCTCTC GTCGTATCGCTCGCAACACCGGCATCATTCTCGCTGAAGAGTCGAATATTGGTCGCGCTAATGATCCAGCTGGTGGCTCC TTCTATGTCGAGGCACTCACCAAGAAGTTGGAGGATGCCGGTTGGGCCGAGTTCCAGGCCGTCGAGGCTGCTGGTGGCAT GGCTGCCGCCCTCACCGGCGACCATGTCCGCACCGAGCTCGACAAGCTCAACACCGAGCGTGCCAAGCGTCTTGCCACTC GCAAGCAGCCGATTACGGCCGTCAGTGAGTTCCCGCTGCTCGATGCCAAGTCCGTCGAGACCAAACCGTATCCAGCAGCC CCGGCCCGTGAGGGTCTGGAATGGCACCGTGACGCCGAGGTCTTCGAGGCCCTCGTTGATCGCTCTGCCACTTGCCCTGA GCGTCCAAAAGTGTTCCTGGCCTGCCTGGGAACCCGCCGTGACTTTGGCCCGCGCGAGGGATTCTCCGCCCCGGTATGGC ACATCGCCGGCATGGAAACCCCCGAGTGTGAGGGGGGCACCACCGAGGAGGTCGTGAAGGCCTTTAAGGAGTCTGGTGCT GATATCGCCGACCTGTGCTCGAACGCCAAGACCTACGCGGCTCAAGGTCTCGAGGTCGCCAAGGCCCTCAAGGAGGCTGG CGCCAAGCTGGTTTACCTGTCAGGTGCCTTCAAGGAATTCGGTGATGATGCCGCCGAGGCCGAGAAGGTCATCGACGGGC GCATCTACCTCGGGATGGACGTCGTGGACGTCCTGACCGCCACTCTGGACACGTTGGGAGTTGCCAAGTGA
Upstream 100 bases:
>100_bases GCCAGAGCGTGTGGTGCACTACGCGTGTACCACAGCGTCCGAGGTCTCGAGGGCCGACCGAGGTCGTCCAACCATCCACA GCGGAGCAGGAGTCTAACGA
Downstream 100 bases:
>100_bases CCACCCTGCCTCGTTTCGATTCCATTAACCTCGGGGATTCCCCGGTTCCCGCAGATGCGCAGGAGCAGTTCGCCAGATTG GCTGCGGCCGCCGGTGAGCA
Product: methylmalonyl-CoA mutase small subunit
Products: NA
Alternate protein names: MCB-beta [H]
Number of amino acids: Translated: 636; Mature: 635
Protein sequence:
>636_residues MTDPDNLASKSVEDRMPEELSLAGDFPKVTHEQWEEAVLKVLNRGRPEGKELNIEQGMKRLEPTTVDGIQIEPMYRRQDA PEKLGVPGVPPFTRGTTIREGGMDAWDVRALHEDPDVAFTKKAVIADLERGVTSLWLRVGADAIKPEDIAGDLKDVLLDL AKVEVSSRDDQEAAAQALLDVYIESKIDADKLSFNLGLDPIGFAALNGGNPDLSGMAEWVKKTENYKNSRPFVVDATIYH NAGAGDVHELAWAVATGVEYVRAFIEQGLTAEQAFDSINFRVTATHDEFLTISRLRALRTLWNRVGEVFEVPAAKRGARQ EAVTSWRELTRDDPYVNILRGTIATFGAAVGGAEAVTTLPFDAAIGLPKSDFSRRIARNTGIILAEESNIGRANDPAGGS FYVEALTKKLEDAGWAEFQAVEAAGGMAAALTGDHVRTELDKLNTERAKRLATRKQPITAVSEFPLLDAKSVETKPYPAA PAREGLEWHRDAEVFEALVDRSATCPERPKVFLACLGTRRDFGPREGFSAPVWHIAGMETPECEGGTTEEVVKAFKESGA DIADLCSNAKTYAAQGLEVAKALKEAGAKLVYLSGAFKEFGDDAAEAEKVIDGRIYLGMDVVDVLTATLDTLGVAK
Sequences:
>Translated_636_residues MTDPDNLASKSVEDRMPEELSLAGDFPKVTHEQWEEAVLKVLNRGRPEGKELNIEQGMKRLEPTTVDGIQIEPMYRRQDA PEKLGVPGVPPFTRGTTIREGGMDAWDVRALHEDPDVAFTKKAVIADLERGVTSLWLRVGADAIKPEDIAGDLKDVLLDL AKVEVSSRDDQEAAAQALLDVYIESKIDADKLSFNLGLDPIGFAALNGGNPDLSGMAEWVKKTENYKNSRPFVVDATIYH NAGAGDVHELAWAVATGVEYVRAFIEQGLTAEQAFDSINFRVTATHDEFLTISRLRALRTLWNRVGEVFEVPAAKRGARQ EAVTSWRELTRDDPYVNILRGTIATFGAAVGGAEAVTTLPFDAAIGLPKSDFSRRIARNTGIILAEESNIGRANDPAGGS FYVEALTKKLEDAGWAEFQAVEAAGGMAAALTGDHVRTELDKLNTERAKRLATRKQPITAVSEFPLLDAKSVETKPYPAA PAREGLEWHRDAEVFEALVDRSATCPERPKVFLACLGTRRDFGPREGFSAPVWHIAGMETPECEGGTTEEVVKAFKESGA DIADLCSNAKTYAAQGLEVAKALKEAGAKLVYLSGAFKEFGDDAAEAEKVIDGRIYLGMDVVDVLTATLDTLGVAK >Mature_635_residues TDPDNLASKSVEDRMPEELSLAGDFPKVTHEQWEEAVLKVLNRGRPEGKELNIEQGMKRLEPTTVDGIQIEPMYRRQDAP EKLGVPGVPPFTRGTTIREGGMDAWDVRALHEDPDVAFTKKAVIADLERGVTSLWLRVGADAIKPEDIAGDLKDVLLDLA KVEVSSRDDQEAAAQALLDVYIESKIDADKLSFNLGLDPIGFAALNGGNPDLSGMAEWVKKTENYKNSRPFVVDATIYHN AGAGDVHELAWAVATGVEYVRAFIEQGLTAEQAFDSINFRVTATHDEFLTISRLRALRTLWNRVGEVFEVPAAKRGARQE AVTSWRELTRDDPYVNILRGTIATFGAAVGGAEAVTTLPFDAAIGLPKSDFSRRIARNTGIILAEESNIGRANDPAGGSF YVEALTKKLEDAGWAEFQAVEAAGGMAAALTGDHVRTELDKLNTERAKRLATRKQPITAVSEFPLLDAKSVETKPYPAAP AREGLEWHRDAEVFEALVDRSATCPERPKVFLACLGTRRDFGPREGFSAPVWHIAGMETPECEGGTTEEVVKAFKESGAD IADLCSNAKTYAAQGLEVAKALKEAGAKLVYLSGAFKEFGDDAAEAEKVIDGRIYLGMDVVDVLTATLDTLGVAK
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates [H]
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylmalonyl-CoA mutase family [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=450, Percent_Identity=29.3333333333333, Blast_Score=141, Evalue=2e-33, Organism=Escherichia coli, GI1789284, Length=471, Percent_Identity=30.9978768577495, Blast_Score=151, Evalue=9e-38, Organism=Caenorhabditis elegans, GI25144500, Length=458, Percent_Identity=27.5109170305677, Blast_Score=137, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR004608 [H]
Pfam domain/function: PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 69086; Mature: 68955
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00544 METMALONYL_COA_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPDNLASKSVEDRMPEELSLAGDFPKVTHEQWEEAVLKVLNRGRPEGKELNIEQGMKR CCCCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHH LEPTTVDGIQIEPMYRRQDAPEKLGVPGVPPFTRGTTIREGGMDAWDVRALHEDPDVAFT CCCCCCCCEEECCHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHH KKAVIADLERGVTSLWLRVGADAIKPEDIAGDLKDVLLDLAKVEVSSRDDQEAAAQALLD HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VYIESKIDADKLSFNLGLDPIGFAALNGGNPDLSGMAEWVKKTENYKNSRPFVVDATIYH HHHHCCCCHHHEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEE NAGAGDVHELAWAVATGVEYVRAFIEQGLTAEQAFDSINFRVTATHDEFLTISRLRALRT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCHHHHHHHHHHHHHH LWNRVGEVFEVPAAKRGARQEAVTSWRELTRDDPYVNILRGTIATFGAAVGGAEAVTTLP HHHHHHHHHCCCCHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHEEECC FDAAIGLPKSDFSRRIARNTGIILAEESNIGRANDPAGGSFYVEALTKKLEDAGWAEFQA CHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH VEAAGGMAAALTGDHVRTELDKLNTERAKRLATRKQPITAVSEFPLLDAKSVETKPYPAA HHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCC PAREGLEWHRDAEVFEALVDRSATCPERPKVFLACLGTRRDFGPREGFSAPVWHIAGMET CHHHCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCC PECEGGTTEEVVKAFKESGADIADLCSNAKTYAAQGLEVAKALKEAGAKLVYLSGAFKEF CCCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHH GDDAAEAEKVIDGRIYLGMDVVDVLTATLDTLGVAK CCCHHHHHHHHCCEEEECHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDPDNLASKSVEDRMPEELSLAGDFPKVTHEQWEEAVLKVLNRGRPEGKELNIEQGMKR CCCHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHH LEPTTVDGIQIEPMYRRQDAPEKLGVPGVPPFTRGTTIREGGMDAWDVRALHEDPDVAFT CCCCCCCCEEECCHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHH KKAVIADLERGVTSLWLRVGADAIKPEDIAGDLKDVLLDLAKVEVSSRDDQEAAAQALLD HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VYIESKIDADKLSFNLGLDPIGFAALNGGNPDLSGMAEWVKKTENYKNSRPFVVDATIYH HHHHCCCCHHHEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEE NAGAGDVHELAWAVATGVEYVRAFIEQGLTAEQAFDSINFRVTATHDEFLTISRLRALRT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCHHHHHHHHHHHHHH LWNRVGEVFEVPAAKRGARQEAVTSWRELTRDDPYVNILRGTIATFGAAVGGAEAVTTLP HHHHHHHHHCCCCHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHEEECC FDAAIGLPKSDFSRRIARNTGIILAEESNIGRANDPAGGSFYVEALTKKLEDAGWAEFQA CHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH VEAAGGMAAALTGDHVRTELDKLNTERAKRLATRKQPITAVSEFPLLDAKSVETKPYPAA HHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCC PAREGLEWHRDAEVFEALVDRSATCPERPKVFLACLGTRRDFGPREGFSAPVWHIAGMET CHHHCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCC PECEGGTTEEVVKAFKESGADIADLCSNAKTYAAQGLEVAKALKEAGAKLVYLSGAFKEF CCCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHH GDDAAEAEKVIDGRIYLGMDVVDVLTATLDTLGVAK CCCHHHHHHHHCCEEEECHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2569861; 2569860; 8805541; 9655823 [H]