| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is mutB [H]
Identifier: 50842082
GI number: 50842082
Start: 659104
End: 661293
Strand: Direct
Name: mutB [H]
Synonym: PPA0596
Alternate gene names: 50842082
Gene position: 659104-661293 (Clockwise)
Preceding gene: 50842081
Following gene: 50842083
Centisome position: 25.74
GC content: 60.91
Gene sequence:
>2190_bases GTGACCACCCTGCCTCGTTTCGATTCCATTAACCTCGGGGATTCCCCGGTTCCCGCAGATGCGCAGGAGCAGTTCGCCAG ATTGGCTGCGGCCGCCGGTGAGCAGGAGCCCTGGACCACTCCGGAGCAAATTCCGGTTGGTCACCTCTACTCCGAGGACG TCTACGGTGACATGGACTGGCTAGACACCTACGCCGGTCTGCCACCATTCACACATGGCCCGTACGCTACCATGTATGCC TTCCGACCGTGGACGATTCGCCAGTACGCCGGATTCTCCACCGCTAAAGAGTCCAACGCGTTCTACCGTCGTAACCTGGC CGCCGGTCAGAAGGGCCTGTCGGTCGCCTTCGACCTGCCGACCCACCGCGGCTACGACTCTGACAACCCGCGTGTTCCCG GCGATGTCGGTATGGCAGGCGTGGCCGTGGACTCCATCCTGGACATGCGTGAGCTCTTTGCGGGCATCCCGCTGGACCGC ATGTCGGTGTCCATGACGATGAACGGCGCAGTGCTGCCGATTCTTGCCCTGTACGTTGTTACCGCTGAGGAGCAAGGCGC CAAGCCCGAGCAGCTCGCCGGAACGATCCAGAACGACATCCTCAAGGAGTTCATGGTTCGTAACACCTACATCTACCCGC CGCTGCCTTCGATGCGGATTATCTCCGACATCTTCGCGTACACCAGCGCGAACATGCCGAAGTGGAACTCCATCTCGATC TCCGGCTACCACATGCAAGAAGCTGGCGCTACCGCCGATATCGAGATGGCCTACACTCTGGCCGACGGCGTTGATTACAT TCGCGCCGGTGAGTCGGTGGGCCTACAGGTCGACCAGTTTGCGCCGCGTCTTTCCTTCTTCTGGGCCATTGGCACCAACT TCTTCATGGAGGTCGCCAAGATGCGTGCGGCCCGCATGCTGTGGGCCAAGCTGGTGCACCAGTTCAACCCGAAGAATCCG AAGTCGATGAGCTTACGCACTCACTCGCAGACCTCTGGCTGGTCGTTGACAGCCCAGGACGTTTACAACAACGTGATTCG TACTTGTGTGGAGGCCATGGGAGCCACTCAGGGACACACTCAGTCCCTGCACACGAACTCCCTCGACGAGGCCATCGCTC TGCCGACCGACTTCTCCGCCCGTATTGCTCGAAACACCCAGCTGTTCATCCAGCAGGAGTCGGGCACCTGCCGCGTTATC GATCCTTGGAGCGGCTCGGCCTACGTCGAGAAGCTCACCCTCGAGCTGGCTCGCAAGGCCTGGGCTCACATCCAGGAGGT CGAGAAGGCCGGTGGTATGGCCAAGGCCATTGAGAAGGGCATCCCGAAGATGCGCATCGAGGAAGCTGCTGCTCGTACCC AGGCTCGTATCGACTCGGGTCGTCAGCCCCTCATCGGCGTCAACAAGTACCGTCTCGACGAGGAGGAGCCCCTCGAGGTC CTCAAGGTCGACAACACTCAGGTACTCAAGGAACAGAAGGCCAAACTCGAGCAGCTGCGCGCCAACCGCGACGAGGAGGC GTGCCAGGCCGCTCTGGAGAAGATCACCTGGGCAGCTGCCAACCCGGATCCGAGTGATCCTGACCGTAACCTGCTCAAGC TGTGCATTGACGCTGGCCGCGCAGATGCGTCTGTCGGTGAGATGTCTGACGCAATGGAGAAGGTCTTCGGGCGTTACACT GCCCAGATCCGTACCATTGAAGGCGTGTACAGCAAGGCAGCCGGCAATTCTGAGTCCACTAAGAAGGTCCACGAGCTCAT CAAGCAGTTCGAGGAGAAGGAAGGCCGTCGTCCGCGTATCATGATCGCGAAGATGGGCCAGGACGGTCACGACCGTGGCC AGAAGGTCGTCGCGACCGCTTATGCTGACCTTGGTATGGACGTTGATGTCGGCCCGCTGTTCCAGACCCCGGAGGAGACT GCTCGACAGGCTGTTGAGGGTGACGTCCACGTTGTCGGTGTCTCCTCACTGGCCGCCGGGCACCTTACGCTAGTGCCGGC CCTGCGTAAGGAACTGGACAAGCTTGGTCGCTCCGACATCATGATTGTCGTCGGTGGCGTCATTCCGACCCAGGACTTCG ACGAGCTGCGCAAGGATGGCGCGGCGGCCATCTATCCGCCTGGCACCGTTATCCCGGACGCTGCCGTTGAGTTGATGGAG AAGCTGCTCGCCGCGCACAACGACGACTGA
Upstream 100 bases:
>100_bases ATGCCGCCGAGGCCGAGAAGGTCATCGACGGGCGCATCTACCTCGGGATGGACGTCGTGGACGTCCTGACCGCCACTCTG GACACGTTGGGAGTTGCCAA
Downstream 100 bases:
>100_bases GCCCGATAGGTTGCTAACCTGAACGAGGCCTTCGGAGCCTAGGTTTCGAAGGCCTCGTGAGCTCCCGATGTTGGGATACT ACGGAAAACCACGCGGGATG
Product: methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM-alpha [H]
Number of amino acids: Translated: 729; Mature: 728
Protein sequence:
>729_residues MTTLPRFDSINLGDSPVPADAQEQFARLAAAAGEQEPWTTPEQIPVGHLYSEDVYGDMDWLDTYAGLPPFTHGPYATMYA FRPWTIRQYAGFSTAKESNAFYRRNLAAGQKGLSVAFDLPTHRGYDSDNPRVPGDVGMAGVAVDSILDMRELFAGIPLDR MSVSMTMNGAVLPILALYVVTAEEQGAKPEQLAGTIQNDILKEFMVRNTYIYPPLPSMRIISDIFAYTSANMPKWNSISI SGYHMQEAGATADIEMAYTLADGVDYIRAGESVGLQVDQFAPRLSFFWAIGTNFFMEVAKMRAARMLWAKLVHQFNPKNP KSMSLRTHSQTSGWSLTAQDVYNNVIRTCVEAMGATQGHTQSLHTNSLDEAIALPTDFSARIARNTQLFIQQESGTCRVI DPWSGSAYVEKLTLELARKAWAHIQEVEKAGGMAKAIEKGIPKMRIEEAAARTQARIDSGRQPLIGVNKYRLDEEEPLEV LKVDNTQVLKEQKAKLEQLRANRDEEACQAALEKITWAAANPDPSDPDRNLLKLCIDAGRADASVGEMSDAMEKVFGRYT AQIRTIEGVYSKAAGNSESTKKVHELIKQFEEKEGRRPRIMIAKMGQDGHDRGQKVVATAYADLGMDVDVGPLFQTPEET ARQAVEGDVHVVGVSSLAAGHLTLVPALRKELDKLGRSDIMIVVGGVIPTQDFDELRKDGAAAIYPPGTVIPDAAVELME KLLAAHNDD
Sequences:
>Translated_729_residues MTTLPRFDSINLGDSPVPADAQEQFARLAAAAGEQEPWTTPEQIPVGHLYSEDVYGDMDWLDTYAGLPPFTHGPYATMYA FRPWTIRQYAGFSTAKESNAFYRRNLAAGQKGLSVAFDLPTHRGYDSDNPRVPGDVGMAGVAVDSILDMRELFAGIPLDR MSVSMTMNGAVLPILALYVVTAEEQGAKPEQLAGTIQNDILKEFMVRNTYIYPPLPSMRIISDIFAYTSANMPKWNSISI SGYHMQEAGATADIEMAYTLADGVDYIRAGESVGLQVDQFAPRLSFFWAIGTNFFMEVAKMRAARMLWAKLVHQFNPKNP KSMSLRTHSQTSGWSLTAQDVYNNVIRTCVEAMGATQGHTQSLHTNSLDEAIALPTDFSARIARNTQLFIQQESGTCRVI DPWSGSAYVEKLTLELARKAWAHIQEVEKAGGMAKAIEKGIPKMRIEEAAARTQARIDSGRQPLIGVNKYRLDEEEPLEV LKVDNTQVLKEQKAKLEQLRANRDEEACQAALEKITWAAANPDPSDPDRNLLKLCIDAGRADASVGEMSDAMEKVFGRYT AQIRTIEGVYSKAAGNSESTKKVHELIKQFEEKEGRRPRIMIAKMGQDGHDRGQKVVATAYADLGMDVDVGPLFQTPEET ARQAVEGDVHVVGVSSLAAGHLTLVPALRKELDKLGRSDIMIVVGGVIPTQDFDELRKDGAAAIYPPGTVIPDAAVELME KLLAAHNDD >Mature_728_residues TTLPRFDSINLGDSPVPADAQEQFARLAAAAGEQEPWTTPEQIPVGHLYSEDVYGDMDWLDTYAGLPPFTHGPYATMYAF RPWTIRQYAGFSTAKESNAFYRRNLAAGQKGLSVAFDLPTHRGYDSDNPRVPGDVGMAGVAVDSILDMRELFAGIPLDRM SVSMTMNGAVLPILALYVVTAEEQGAKPEQLAGTIQNDILKEFMVRNTYIYPPLPSMRIISDIFAYTSANMPKWNSISIS GYHMQEAGATADIEMAYTLADGVDYIRAGESVGLQVDQFAPRLSFFWAIGTNFFMEVAKMRAARMLWAKLVHQFNPKNPK SMSLRTHSQTSGWSLTAQDVYNNVIRTCVEAMGATQGHTQSLHTNSLDEAIALPTDFSARIARNTQLFIQQESGTCRVID PWSGSAYVEKLTLELARKAWAHIQEVEKAGGMAKAIEKGIPKMRIEEAAARTQARIDSGRQPLIGVNKYRLDEEEPLEVL KVDNTQVLKEQKAKLEQLRANRDEEACQAALEKITWAAANPDPSDPDRNLLKLCIDAGRADASVGEMSDAMEKVFGRYTA QIRTIEGVYSKAAGNSESTKKVHELIKQFEEKEGRRPRIMIAKMGQDGHDRGQKVVATAYADLGMDVDVGPLFQTPEETA RQAVEGDVHVVGVSSLAAGHLTLVPALRKELDKLGRSDIMIVVGGVIPTQDFDELRKDGAAAIYPPGTVIPDAAVELMEK LLAAHNDD
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates [H]
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=686, Percent_Identity=60.2040816326531, Blast_Score=863, Evalue=0.0, Organism=Escherichia coli, GI1789284, Length=693, Percent_Identity=59.7402597402597, Blast_Score=832, Evalue=0.0, Organism=Caenorhabditis elegans, GI25144500, Length=689, Percent_Identity=63.5703918722787, Blast_Score=894, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006159 - InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR006098 [H]
Pfam domain/function: PF02310 B12-binding; PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 80179; Mature: 80048
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00544 METMALONYL_COA_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLPRFDSINLGDSPVPADAQEQFARLAAAAGEQEPWTTPEQIPVGHLYSEDVYGDMDW CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCHHH LDTYAGLPPFTHGPYATMYAFRPWTIRQYAGFSTAKESNAFYRRNLAAGQKGLSVAFDLP HHHHCCCCCCCCCCCEEEEEECCEEHHHHCCCCCCHHCCHHHHHHHHCCCCCCEEEEECC THRGYDSDNPRVPGDVGMAGVAVDSILDMRELFAGIPLDRMSVSMTMNGAVLPILALYVV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCHHHHHHHHHHH TAEEQGAKPEQLAGTIQNDILKEFMVRNTYIYPPLPSMRIISDIFAYTSANMPKWNSISI CCHHCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHCCCCCCCCEEEE SGYHMQEAGATADIEMAYTLADGVDYIRAGESVGLQVDQFAPRLSFFWAIGTNFFMEVAK ECEEECCCCCCCCEEEEEEHHHCHHHHHCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHH MRAARMLWAKLVHQFNPKNPKSMSLRTHSQTSGWSLTAQDVYNNVIRTCVEAMGATQGHT HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCC QSLHTNSLDEAIALPTDFSARIARNTQLFIQQESGTCRVIDPWSGSAYVEKLTLELARKA CCCCCCCCHHHHCCCCCCHHHHHCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHH WAHIQEVEKAGGMAKAIEKGIPKMRIEEAAARTQARIDSGRQPLIGVNKYRLDEEEPLEV HHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCE LKVDNTQVLKEQKAKLEQLRANRDEEACQAALEKITWAAANPDPSDPDRNLLKLCIDAGR EECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCC ADASVGEMSDAMEKVFGRYTAQIRTIEGVYSKAAGNSESTKKVHELIKQFEEKEGRRPRI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEE MIAKMGQDGHDRGQKVVATAYADLGMDVDVGPLFQTPEETARQAVEGDVHVVGVSSLAAG EEEECCCCCCHHCCEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHCCC HLTLVPALRKELDKLGRSDIMIVVGGVIPTQDFDELRKDGAAAIYPPGTVIPDAAVELME HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCEEECCCCCCCCHHHHHHHH KLLAAHNDD HHHHHCCCC >Mature Secondary Structure TTLPRFDSINLGDSPVPADAQEQFARLAAAAGEQEPWTTPEQIPVGHLYSEDVYGDMDW CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCHHH LDTYAGLPPFTHGPYATMYAFRPWTIRQYAGFSTAKESNAFYRRNLAAGQKGLSVAFDLP HHHHCCCCCCCCCCCEEEEEECCEEHHHHCCCCCCHHCCHHHHHHHHCCCCCCEEEEECC THRGYDSDNPRVPGDVGMAGVAVDSILDMRELFAGIPLDRMSVSMTMNGAVLPILALYVV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCHHHHHHHHHHH TAEEQGAKPEQLAGTIQNDILKEFMVRNTYIYPPLPSMRIISDIFAYTSANMPKWNSISI CCHHCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHCCCCCCCCEEEE SGYHMQEAGATADIEMAYTLADGVDYIRAGESVGLQVDQFAPRLSFFWAIGTNFFMEVAK ECEEECCCCCCCCEEEEEEHHHCHHHHHCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHH MRAARMLWAKLVHQFNPKNPKSMSLRTHSQTSGWSLTAQDVYNNVIRTCVEAMGATQGHT HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCC QSLHTNSLDEAIALPTDFSARIARNTQLFIQQESGTCRVIDPWSGSAYVEKLTLELARKA CCCCCCCCHHHHCCCCCCHHHHHCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHH WAHIQEVEKAGGMAKAIEKGIPKMRIEEAAARTQARIDSGRQPLIGVNKYRLDEEEPLEV HHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCE LKVDNTQVLKEQKAKLEQLRANRDEEACQAALEKITWAAANPDPSDPDRNLLKLCIDAGR EECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCC ADASVGEMSDAMEKVFGRYTAQIRTIEGVYSKAAGNSESTKKVHELIKQFEEKEGRRPRI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEE MIAKMGQDGHDRGQKVVATAYADLGMDVDVGPLFQTPEETARQAVEGDVHVVGVSSLAAG EEEECCCCCCHHCCEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHCCC HLTLVPALRKELDKLGRSDIMIVVGGVIPTQDFDELRKDGAAAIYPPGTVIPDAAVELME HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCEEECCCCCCCCHHHHHHHH KLLAAHNDD HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2569861; 2569860; 8805541; 9655823 [H]