| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is engD [H]
Identifier: 50842061
GI number: 50842061
Start: 636616
End: 637689
Strand: Direct
Name: engD [H]
Synonym: PPA0575
Alternate gene names: 50842061
Gene position: 636616-637689 (Clockwise)
Preceding gene: 50842060
Following gene: 50842062
Centisome position: 24.87
GC content: 57.73
Gene sequence:
>1074_bases GTGGCACTTACGATTGGAATCGTCGGTCTTCCCAACGCCGGCAAGTCGACTCTGTTCAACGCGCTGACCAAGAATGACGT CTTGGCGGCGAACTACCCCTTCGCGACCATTGAGCCGAATGTTGGCGTGGTCGGGGTGCCGGACAAGCGCCTCGATGTGC TGACGGAGATGTTTCATTCCGCTAAGACCATTCCTGCGACGGTGTCCTTCGTCGACATCGCCGGAATCGTCAAAGGCGCT AGCAAAGGTGAGGGGATGGGCAACGAGTTCCTCTCTAACATTCGTGAAGCCGACGCCATCTGCCAGGTGACAAGGTGTTT CGCAGACGACGATGTCACCCACGTCAACGGTCACGTCGATCCCTCCGACGACATCGAGACCATTACTACAGAGCTCGTGC TCGCTGATCTGCAGACGATGGAGAAGCAACTGCCCAAGTTGCAAAAAGAAGCCGCGATCAAGAAGGAGTCTCGTCCCAAA GTCGAGGCGTGGGAGCAGGCTAAGGCGGTGCTCGAAGAGGGCAAGACGATCTTCTCAGCCGGGCTCGATCCCGAGCCGTT GCATGACCTCTTCCTGCTGACGACAAAGCCCTTCATCTACGTCTTTAACTGTGACCAGGATCAGCTCGCTGACGCCGATT TCCAGGCCAAGATGGAGAAGTTGGTGGCTCCTGCTGAGGCGATCTTCTTGGATGCTGAGTTTGAGGCTGAACTGGCCGAG ATGGAGCCCGAGGACGCTGCTGAGTTCCTTGCGGATGCGGGTATCGAGGAACCCGGTCTAGACAAGCTCGCGCGGGTGGG CTTCGACACTCTTGGTCTACAGACCTTCCTAACTGCGGGGGAGAAGGAGTCCCGCGCATGGACGATTCACAAGGGCGACA CCGCCCCTGAGGCTGCTGGCGTCATCCATACCGACTTCCAGAAGGGGTTCATCAAGGCCCAGGTGGTGTCCTTCGGCGAC CTTGTTGAATTTGGCGGCGAAAAGGAGGCCCAGGCTGCTGGGAAGTTGCGGTTGGAGGGCAAGGAGTACGTTATGCAGGA CGGTGACGTAGTGGAATTCCGATTTAACGTGTAG
Upstream 100 bases:
>100_bases TTGACTGAGCCTCAAGCATATGACCCGACGTTCCCGTGTGGAGCGCTGATGGGAGGTGGTTAGTGGGTTGGGTGCCGGCT GAACGGTAGAGTGGCCGAAC
Downstream 100 bases:
>100_bases CTCTGGTTTGATACTTACTTGGCTTAACCGCATCTGAGATCCGTCATATCTTTGGCGTAGCCTTATTGGTATGAATAACA TGCCGTAGCCAAAGGCCATC
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MALTIGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDKRLDVLTEMFHSAKTIPATVSFVDIAGIVKGA SKGEGMGNEFLSNIREADAICQVTRCFADDDVTHVNGHVDPSDDIETITTELVLADLQTMEKQLPKLQKEAAIKKESRPK VEAWEQAKAVLEEGKTIFSAGLDPEPLHDLFLLTTKPFIYVFNCDQDQLADADFQAKMEKLVAPAEAIFLDAEFEAELAE MEPEDAAEFLADAGIEEPGLDKLARVGFDTLGLQTFLTAGEKESRAWTIHKGDTAPEAAGVIHTDFQKGFIKAQVVSFGD LVEFGGEKEAQAAGKLRLEGKEYVMQDGDVVEFRFNV
Sequences:
>Translated_357_residues MALTIGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDKRLDVLTEMFHSAKTIPATVSFVDIAGIVKGA SKGEGMGNEFLSNIREADAICQVTRCFADDDVTHVNGHVDPSDDIETITTELVLADLQTMEKQLPKLQKEAAIKKESRPK VEAWEQAKAVLEEGKTIFSAGLDPEPLHDLFLLTTKPFIYVFNCDQDQLADADFQAKMEKLVAPAEAIFLDAEFEAELAE MEPEDAAEFLADAGIEEPGLDKLARVGFDTLGLQTFLTAGEKESRAWTIHKGDTAPEAAGVIHTDFQKGFIKAQVVSFGD LVEFGGEKEAQAAGKLRLEGKEYVMQDGDVVEFRFNV >Mature_356_residues ALTIGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDKRLDVLTEMFHSAKTIPATVSFVDIAGIVKGAS KGEGMGNEFLSNIREADAICQVTRCFADDDVTHVNGHVDPSDDIETITTELVLADLQTMEKQLPKLQKEAAIKKESRPKV EAWEQAKAVLEEGKTIFSAGLDPEPLHDLFLLTTKPFIYVFNCDQDQLADADFQAKMEKLVAPAEAIFLDAEFEAELAEM EPEDAAEFLADAGIEEPGLDKLARVGFDTLGLQTFLTAGEKESRAWTIHKGDTAPEAAGVIHTDFQKGFIKAQVVSFGDL VEFGGEKEAQAAGKLRLEGKEYVMQDGDVVEFRFNV
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=378, Percent_Identity=42.0634920634921, Blast_Score=270, Evalue=1e-72, Organism=Homo sapiens, GI58761502, Length=183, Percent_Identity=38.7978142076503, Blast_Score=128, Evalue=8e-30, Organism=Escherichia coli, GI1787454, Length=363, Percent_Identity=49.3112947658402, Blast_Score=356, Evalue=1e-99, Organism=Escherichia coli, GI1789574, Length=171, Percent_Identity=29.8245614035088, Blast_Score=68, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17509631, Length=370, Percent_Identity=41.6216216216216, Blast_Score=278, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6319499, Length=374, Percent_Identity=40.1069518716578, Blast_Score=239, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6321773, Length=381, Percent_Identity=34.3832020997375, Blast_Score=199, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6321649, Length=165, Percent_Identity=32.7272727272727, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI24640873, Length=371, Percent_Identity=42.3180592991914, Blast_Score=269, Evalue=2e-72, Organism=Drosophila melanogaster, GI24640877, Length=371, Percent_Identity=42.3180592991914, Blast_Score=269, Evalue=2e-72, Organism=Drosophila melanogaster, GI24640875, Length=371, Percent_Identity=42.3180592991914, Blast_Score=269, Evalue=2e-72, Organism=Drosophila melanogaster, GI24640879, Length=330, Percent_Identity=40.3030303030303, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24585318, Length=152, Percent_Identity=30.2631578947368, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 38753; Mature: 38622
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTIGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDKRLDVLTEMFHS CEEEEEEEECCCCCHHHHHHHHHCCCEEEECCCCEEECCCCCEEECCCHHHHHHHHHHHC AKTIPATVSFVDIAGIVKGASKGEGMGNEFLSNIREADAICQVTRCFADDDVTHVNGHVD CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC PSDDIETITTELVLADLQTMEKQLPKLQKEAAIKKESRPKVEAWEQAKAVLEEGKTIFSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEC GLDPEPLHDLFLLTTKPFIYVFNCDQDQLADADFQAKMEKLVAPAEAIFLDAEFEAELAE CCCCCCHHHEEEEECCCEEEEEECCHHHHCCCHHHHHHHHHHCCCHHEEECCHHHHHHHH MEPEDAAEFLADAGIEEPGLDKLARVGFDTLGLQTFLTAGEKESRAWTIHKGDTAPEAAG CCHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC VIHTDFQKGFIKAQVVSFGDLVEFGGEKEAQAAGKLRLEGKEYVMQDGDVVEFRFNV CEEEHHHHCHHHHHHHHHHHHHHCCCCHHHHHCCCEEECCHHHEECCCCEEEEEECC >Mature Secondary Structure ALTIGIVGLPNAGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDKRLDVLTEMFHS EEEEEEEECCCCCHHHHHHHHHCCCEEEECCCCEEECCCCCEEECCCHHHHHHHHHHHC AKTIPATVSFVDIAGIVKGASKGEGMGNEFLSNIREADAICQVTRCFADDDVTHVNGHVD CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC PSDDIETITTELVLADLQTMEKQLPKLQKEAAIKKESRPKVEAWEQAKAVLEEGKTIFSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEC GLDPEPLHDLFLLTTKPFIYVFNCDQDQLADADFQAKMEKLVAPAEAIFLDAEFEAELAE CCCCCCHHHEEEEECCCEEEEEECCHHHHCCCHHHHHHHHHHCCCHHEEECCHHHHHHHH MEPEDAAEFLADAGIEEPGLDKLARVGFDTLGLQTFLTAGEKESRAWTIHKGDTAPEAAG CCHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC VIHTDFQKGFIKAQVVSFGDLVEFGGEKEAQAAGKLRLEGKEYVMQDGDVVEFRFNV CEEEHHHHCHHHHHHHHHHHHHHCCCCHHHHHCCCEEECCHHHEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA