| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is camA [H]
Identifier: 50841628
GI number: 50841628
Start: 167045
End: 168424
Strand: Direct
Name: camA [H]
Synonym: PPA0139
Alternate gene names: 50841628
Gene position: 167045-168424 (Clockwise)
Preceding gene: 50841627
Following gene: 50841629
Centisome position: 6.52
GC content: 62.39
Gene sequence:
>1380_bases GTGCCTTGTCAGGGGGTTTACGCGTGGTGTGGTAATCCGGTTTCTGGTGGCGACGGCTGCCACCCCTCGTGGCAAGACAT GCCGTTGCGTGCCGATATGCCATACGAAGCTTGGCCTAGTGCGAAAAGCTCGCTGGAACCCTCGAAGAGGCAGGGTCGGC AGGTTACCCTGGTTGGTGTATGCATCGTTTCGACGATGAACCCCATTCTGGGAGCAGATATGACGACCTACCAGTACCTC ATCGTCGGTGGCGGGATGGCCGCTGATTCTGCCGCCCGCGGTATCCGCGACATCGACAAGAAAGGGTCGATCGCCATCCT CAGCGCTGACGTCGACGCCCCGTATCCTCGGCCAGCGCTGAGCAAGAAGCTGTGGACTGACCCTGAGTTCACCTGGGACC AGGCCGACCTCGCTACCGTCGCAGACACCGGCGCGGAATTGCGGCTCGGCACTGAGGTGCTCAGCATTGACCGTGACGGC AAGACCGTCCTGACCGCTTCCGGCCAGGTATTCGGCTACCAGAAGTTGCTGCTCGTTACCGGCCTTACCCCGTCGCGCAT TGACGACGACGGCGATGCCGTCCTCTACTTTCGGTCTGCTCGGGACTACCAGCAGCTGCGTGCGCTGGCCCAGCCCGGTC ACCAGTTCGTGGTCGTCGGCGGCGGATATATCGGTGCCGAGCTTGCTGCGGGCCTCGTCCAGCAGGGCTGCGAGGTCGCC CTCGTCACCCCCGATCCGACGCTGGGTGGTTCGCAATTCCCGGCCCAGATTGCGTCTGAGTACCAGAAGCTTTTCGCCGA TGCTGGGGTGCACCTCGTCACTGGGAAGCGCGTCTGTTCGGTGCGCAAACATGAAGCGGCCGAGGTCACCCTCGATGACG GCACTATTCTCCAGGCTGACGATGTTATTGCGGGTTTGGGGGCATCCCCGGTCACCAAACTGGCCGAGGAAGCGGGTCTT ACCGTTAATGATGGGGTCATCGTTGATGAGCAGTTGCGCACCAACGATCCGGCCATCTGGGCCGCCGGAGACATCGCCAA TTACCCGGACCCGGTGTTGGGCCGCACCCGCGTCGAGCATGTGGACAATGCCATCGCGATGGGCAAGGCGGCCGGCCGCA TCATGGCGGGATCAAAAGACTCCTACACCCATACCCCGATGATGTACTCACAAATCTTTGGGGTCCGCTGGGAGGCAGTC GGCACCCTCGACTCCAGCCTCGCGACCACATCAGTGGAAGCTGGGGATGGGCAGGTCGTCTACTACCTGTCCGACGGCAA GCCTGTCGGTGTGCTGCTGTGGAACCTTCCCGGACGCACCGACAAGGCCGTCACAGTGCTTGCCGATCCGCCTGAGGACC TCTCGACCGCTATCAGCTAA
Upstream 100 bases:
>100_bases CCAGGCGAAGATGAAGGATGTCGACTCCGTTGCCGAGGAGGGTGACGCCTGACCTCACTCCCAACCCATTGCGAGGTCCG TCCCGTTTGGGGTGGGCCTC
Downstream 100 bases:
>100_bases CCACTAGGAGGAATCATGGATCTTGGACTCAACGGACGCACTGCGCTCATCACTGGCGCTGATTCGGGTATTGGCTGGCA CACCGCGAAACTCCTCCTCG
Product: reductase, ferredoxin
Products: Oxidized Ferredoxin; NADH; cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol; NAD [C]
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MPCQGVYAWCGNPVSGGDGCHPSWQDMPLRADMPYEAWPSAKSSLEPSKRQGRQVTLVGVCIVSTMNPILGADMTTYQYL IVGGGMAADSAARGIRDIDKKGSIAILSADVDAPYPRPALSKKLWTDPEFTWDQADLATVADTGAELRLGTEVLSIDRDG KTVLTASGQVFGYQKLLLVTGLTPSRIDDDGDAVLYFRSARDYQQLRALAQPGHQFVVVGGGYIGAELAAGLVQQGCEVA LVTPDPTLGGSQFPAQIASEYQKLFADAGVHLVTGKRVCSVRKHEAAEVTLDDGTILQADDVIAGLGASPVTKLAEEAGL TVNDGVIVDEQLRTNDPAIWAAGDIANYPDPVLGRTRVEHVDNAIAMGKAAGRIMAGSKDSYTHTPMMYSQIFGVRWEAV GTLDSSLATTSVEAGDGQVVYYLSDGKPVGVLLWNLPGRTDKAVTVLADPPEDLSTAIS
Sequences:
>Translated_459_residues MPCQGVYAWCGNPVSGGDGCHPSWQDMPLRADMPYEAWPSAKSSLEPSKRQGRQVTLVGVCIVSTMNPILGADMTTYQYL IVGGGMAADSAARGIRDIDKKGSIAILSADVDAPYPRPALSKKLWTDPEFTWDQADLATVADTGAELRLGTEVLSIDRDG KTVLTASGQVFGYQKLLLVTGLTPSRIDDDGDAVLYFRSARDYQQLRALAQPGHQFVVVGGGYIGAELAAGLVQQGCEVA LVTPDPTLGGSQFPAQIASEYQKLFADAGVHLVTGKRVCSVRKHEAAEVTLDDGTILQADDVIAGLGASPVTKLAEEAGL TVNDGVIVDEQLRTNDPAIWAAGDIANYPDPVLGRTRVEHVDNAIAMGKAAGRIMAGSKDSYTHTPMMYSQIFGVRWEAV GTLDSSLATTSVEAGDGQVVYYLSDGKPVGVLLWNLPGRTDKAVTVLADPPEDLSTAIS >Mature_458_residues PCQGVYAWCGNPVSGGDGCHPSWQDMPLRADMPYEAWPSAKSSLEPSKRQGRQVTLVGVCIVSTMNPILGADMTTYQYLI VGGGMAADSAARGIRDIDKKGSIAILSADVDAPYPRPALSKKLWTDPEFTWDQADLATVADTGAELRLGTEVLSIDRDGK TVLTASGQVFGYQKLLLVTGLTPSRIDDDGDAVLYFRSARDYQQLRALAQPGHQFVVVGGGYIGAELAAGLVQQGCEVAL VTPDPTLGGSQFPAQIASEYQKLFADAGVHLVTGKRVCSVRKHEAAEVTLDDGTILQADDVIAGLGASPVTKLAEEAGLT VNDGVIVDEQLRTNDPAIWAAGDIANYPDPVLGRTRVEHVDNAIAMGKAAGRIMAGSKDSYTHTPMMYSQIFGVRWEAVG TLDSSLATTSVEAGDGQVVYYLSDGKPVGVLLWNLPGRTDKAVTVLADPPEDLSTAIS
Specific function: The oxidation of camphor by cytochrome P450-CAM requires the participation of a flavoprotein, putidaredoxin reductase, and an iron-sulfur protein, putidaredoxin, to mediate the transfer of electrons from NADH to P450 for oxygen activation [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4757732, Length=462, Percent_Identity=28.5714285714286, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI22202629, Length=462, Percent_Identity=28.5714285714286, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI65787454, Length=351, Percent_Identity=28.4900284900285, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI226437568, Length=351, Percent_Identity=28.4900284900285, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI21389617, Length=351, Percent_Identity=28.4900284900285, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI22202631, Length=277, Percent_Identity=27.7978339350181, Blast_Score=87, Evalue=5e-17, Organism=Homo sapiens, GI195927004, Length=225, Percent_Identity=30.2222222222222, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI195927006, Length=186, Percent_Identity=31.1827956989247, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1788892, Length=277, Percent_Identity=32.4909747292419, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1789065, Length=285, Percent_Identity=29.8245614035088, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1789765, Length=296, Percent_Identity=26.3513513513513, Blast_Score=75, Evalue=8e-15, Organism=Caenorhabditis elegans, GI32564386, Length=419, Percent_Identity=28.4009546539379, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17559934, Length=399, Percent_Identity=25.5639097744361, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24581020, Length=466, Percent_Identity=28.5407725321888, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI28573993, Length=466, Percent_Identity=28.5407725321888, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI281359715, Length=365, Percent_Identity=26.8493150684932, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI281359713, Length=365, Percent_Identity=26.8493150684932, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24639250, Length=365, Percent_Identity=26.8493150684932, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI18543267, Length=365, Percent_Identity=26.8493150684932, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24639252, Length=365, Percent_Identity=26.8493150684932, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24639257, Length=365, Percent_Identity=26.8493150684932, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24585130, Length=366, Percent_Identity=24.5901639344262, Blast_Score=90, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.18.1.3 [C]
Molecular weight: Translated: 48584; Mature: 48453
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCQGVYAWCGNPVSGGDGCHPSWQDMPLRADMPYEAWPSAKSSLEPSKRQGRQVTLVGV CCCCCEEHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEE CIVSTMNPILGADMTTYQYLIVGGGMAADSAARGIRDIDKKGSIAILSADVDAPYPRPAL EEHHHCCHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHH SKKLWTDPEFTWDQADLATVADTGAELRLGTEVLSIDRDGKTVLTASGQVFGYQKLLLVT HHHCCCCCCCCCCCCCHHHHHCCCCCEEECCEEEEECCCCCEEEEECCCEECEEEEEEEE GLTPSRIDDDGDAVLYFRSARDYQQLRALAQPGHQFVVVGGGYIGAELAAGLVQQGCEVA CCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCEE LVTPDPTLGGSQFPAQIASEYQKLFADAGVHLVTGKRVCSVRKHEAAEVTLDDGTILQAD EECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHHCCCCEEEEECCCCEEECC DVIAGLGASPVTKLAEEAGLTVNDGVIVDEQLRTNDPAIWAAGDIANYPDPVLGRTRVEH CHHCCCCCCHHHHHHHHCCCEECCCEEEECHHCCCCCCEEEECCCCCCCCCCCCCHHHHH VDNAIAMGKAAGRIMAGSKDSYTHTPMMYSQIFGVRWEAVGTLDSSLATTSVEAGDGQVV HHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHCEEEEEECCCCCCHHEEEEECCCCEEE YYLSDGKPVGVLLWNLPGRTDKAVTVLADPPEDLSTAIS EEECCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHHCC >Mature Secondary Structure PCQGVYAWCGNPVSGGDGCHPSWQDMPLRADMPYEAWPSAKSSLEPSKRQGRQVTLVGV CCCCEEHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEE CIVSTMNPILGADMTTYQYLIVGGGMAADSAARGIRDIDKKGSIAILSADVDAPYPRPAL EEHHHCCHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHH SKKLWTDPEFTWDQADLATVADTGAELRLGTEVLSIDRDGKTVLTASGQVFGYQKLLLVT HHHCCCCCCCCCCCCCHHHHHCCCCCEEECCEEEEECCCCCEEEEECCCEECEEEEEEEE GLTPSRIDDDGDAVLYFRSARDYQQLRALAQPGHQFVVVGGGYIGAELAAGLVQQGCEVA CCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCEE LVTPDPTLGGSQFPAQIASEYQKLFADAGVHLVTGKRVCSVRKHEAAEVTLDDGTILQAD EECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHHCCCCEEEEECCCCEEECC DVIAGLGASPVTKLAEEAGLTVNDGVIVDEQLRTNDPAIWAAGDIANYPDPVLGRTRVEH CHHCCCCCCHHHHHHHHCCCEECCCEEEECHHCCCCCCEEEECCCCCCCCCCCCCHHHHH VDNAIAMGKAAGRIMAGSKDSYTHTPMMYSQIFGVRWEAVGTLDSSLATTSVEAGDGQVV HHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHCEEEEEECCCCCCHHEEEEECCCCEEE YYLSDGKPVGVLLWNLPGRTDKAVTVLADPPEDLSTAIS EEECCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Reduced Ferredoxin; NAD(+); 3-phenylpropionate; NADH; Proton; O2 [C]
Specific reaction: Reduced Ferredoxin + NAD(+) = Oxidized Ferredoxin + NADH. 3-phenylpropionate + NADH + Proton + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2180940; 2613690; 3003058; 12011076; 11524002 [H]