| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is dtpT [H]
Identifier: 50841627
GI number: 50841627
Start: 165419
End: 166996
Strand: Direct
Name: dtpT [H]
Synonym: PPA0138
Alternate gene names: 50841627
Gene position: 165419-166996 (Clockwise)
Preceding gene: 50841626
Following gene: 50841628
Centisome position: 6.46
GC content: 59.32
Gene sequence:
>1578_bases ATGTCCCTCGAACCGCTTGATGTCGACGCGGAAGGCGTCGCCGCCGCCACCAAAGCACGAGGTTTTCGGCCTAAGCATCT GGTGACAGGACCCTCGCGTGACGACAAGTCATTCTTGGGCCACCCCGGCGGTTTGCCGTGGATGCTCCAGGTAGAAATGT GGGAGCGGTTCTCGTGGTATGGCATGCGCGCCATCCTCGTCTACTTCATCACCGACACTTTGGCCCATGGCGGGCTGGGA TTGCCGATCAACGCCGGCCAGGTTGTTATGGCTTCCTACGGCGCCGCAGTGTTGTTGATGACGATTCCTGGCGGTATCTT TGCTGACCGCATCCTCGGGCCGTGGATGTCCACCCTGTGCGGCGGTCTCATCATCATGACGGGTCACGTCATCCTGGCGA TCCCGCAGGTGGTGACGTCATGGATCGGCCTCATCTGCATCGCCATTGGCACGGGTTTTATCAAGCCGAACCTCTCCACG GTGGTAGGAGGTCTCTACGATGACGGCGACCCCCGCCGCGATCAAGGTTTCCTGTACTTCTACATGTCGATCAATATTGG ATCTCTCTTCGCGCCGATCGTCACCGGCCTCCTCAAGGACCATTACGGCTACCACGTAGGTTTCATTGCCGCTGCTATCG GTATGGCTCTGGGGCTGATCGCCTTCTTCCACGGTCGTTCCAAACTGCGTGAGTTCGCCTTCGACATCCCTAATCCGCTG GCCCCCGGCGAGGGTCGCCGGATGGTGCTCCGCGCGTTGGGTATTGCCGTCGTCGGTGCCGTCCTTGCCATCGGTTTCAA AGCCTTGCTGGGCGAGTGGACCTCGGCCATCGCCTACGCTCTGTTCGCCTTTGCCTCGGTGACGGCACTGAGCTACTTCT TGACGATGTTCCGCTCCCCGAAGGTCTCTGATCGTGAGCGTGGCCATTTATGGGCATTTGTGCCGTTGTGGGTTGGCCAA GTGCTGTTCACCATGATCTTCGAGCAGGCGGCCGGCAAGATGCCCACCTTTGCTAAGGACAACACCGACGGCCACATCGT CGGGTCGTGGTCGGTGGAGCCTGAGCAGTACCAAACCATTAACCCGGCTGCAGTCTTGATCCTGGCTGGCCTGCTAGGCA TGTGGTTCCGGCGCAGAGAAGGGAAGTTCCCCAATACCCCGCAGAAGTTCGCCATTTCGGTGTTCATCATTGGTATAACC GCCCTCATTATGGGATTCGGTTTCCGGAGTTGGCCAGGTGGGAACAGACTCGCACCGTGGTGGTTCCTGGCGGTGGTGTT CGTCATTCAGACTGTTGCTGAGCTGTTCATGAACCCGATCGGTTTGTCGACCGCGACCAAGCTAGCCCCGAAAAAGTTCG CATCCCAGAACATGACCCTGTGGCTGCTCGCCTCAGCCTGTGGCCAGGGCCTCGCCTCGGTGACGATCGAGCGCACCAAG AACCTTGGTGACGTGGTGTTCTACTACAGCCTAGGTATCGTGACGATCCTTGTAGCGGTGGTGCTCTTCGTGATCGCCCC ATGGACCCAGGCGAAGATGAAGGATGTCGACTCCGTTGCCGAGGAGGGTGACGCCTGA
Upstream 100 bases:
>100_bases CACCACTGTCTAGGCACAGGTCGGTCATCCCCTGGGGGAGTTCCGAACCATTGTCTTGGAGGACCTCGTGGTGCCTCATA ACATCGGAAAGGAAGGGAAA
Downstream 100 bases:
>100_bases CCTCACTCCCAACCCATTGCGAGGTCCGTCCCGTTTGGGGTGGGCCTCGTGCCTTGTCAGGGGGTTTACGCGTGGTGTGG TAATCCGGTTTCTGGTGGCG
Product: dipeptide/tripeptide permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 525; Mature: 524
Protein sequence:
>525_residues MSLEPLDVDAEGVAAATKARGFRPKHLVTGPSRDDKSFLGHPGGLPWMLQVEMWERFSWYGMRAILVYFITDTLAHGGLG LPINAGQVVMASYGAAVLLMTIPGGIFADRILGPWMSTLCGGLIIMTGHVILAIPQVVTSWIGLICIAIGTGFIKPNLST VVGGLYDDGDPRRDQGFLYFYMSINIGSLFAPIVTGLLKDHYGYHVGFIAAAIGMALGLIAFFHGRSKLREFAFDIPNPL APGEGRRMVLRALGIAVVGAVLAIGFKALLGEWTSAIAYALFAFASVTALSYFLTMFRSPKVSDRERGHLWAFVPLWVGQ VLFTMIFEQAAGKMPTFAKDNTDGHIVGSWSVEPEQYQTINPAAVLILAGLLGMWFRRREGKFPNTPQKFAISVFIIGIT ALIMGFGFRSWPGGNRLAPWWFLAVVFVIQTVAELFMNPIGLSTATKLAPKKFASQNMTLWLLASACGQGLASVTIERTK NLGDVVFYYSLGIVTILVAVVLFVIAPWTQAKMKDVDSVAEEGDA
Sequences:
>Translated_525_residues MSLEPLDVDAEGVAAATKARGFRPKHLVTGPSRDDKSFLGHPGGLPWMLQVEMWERFSWYGMRAILVYFITDTLAHGGLG LPINAGQVVMASYGAAVLLMTIPGGIFADRILGPWMSTLCGGLIIMTGHVILAIPQVVTSWIGLICIAIGTGFIKPNLST VVGGLYDDGDPRRDQGFLYFYMSINIGSLFAPIVTGLLKDHYGYHVGFIAAAIGMALGLIAFFHGRSKLREFAFDIPNPL APGEGRRMVLRALGIAVVGAVLAIGFKALLGEWTSAIAYALFAFASVTALSYFLTMFRSPKVSDRERGHLWAFVPLWVGQ VLFTMIFEQAAGKMPTFAKDNTDGHIVGSWSVEPEQYQTINPAAVLILAGLLGMWFRRREGKFPNTPQKFAISVFIIGIT ALIMGFGFRSWPGGNRLAPWWFLAVVFVIQTVAELFMNPIGLSTATKLAPKKFASQNMTLWLLASACGQGLASVTIERTK NLGDVVFYYSLGIVTILVAVVLFVIAPWTQAKMKDVDSVAEEGDA >Mature_524_residues SLEPLDVDAEGVAAATKARGFRPKHLVTGPSRDDKSFLGHPGGLPWMLQVEMWERFSWYGMRAILVYFITDTLAHGGLGL PINAGQVVMASYGAAVLLMTIPGGIFADRILGPWMSTLCGGLIIMTGHVILAIPQVVTSWIGLICIAIGTGFIKPNLSTV VGGLYDDGDPRRDQGFLYFYMSINIGSLFAPIVTGLLKDHYGYHVGFIAAAIGMALGLIAFFHGRSKLREFAFDIPNPLA PGEGRRMVLRALGIAVVGAVLAIGFKALLGEWTSAIAYALFAFASVTALSYFLTMFRSPKVSDRERGHLWAFVPLWVGQV LFTMIFEQAAGKMPTFAKDNTDGHIVGSWSVEPEQYQTINPAAVLILAGLLGMWFRRREGKFPNTPQKFAISVFIIGITA LIMGFGFRSWPGGNRLAPWWFLAVVFVIQTVAELFMNPIGLSTATKLAPKKFASQNMTLWLLASACGQGLASVTIERTKN LGDVVFYYSLGIVTILVAVVLFVIAPWTQAKMKDVDSVAEEGDA
Specific function: Proton-dependent uptake of di- or tri-peptides [H]
COG id: COG3104
COG function: function code E; Dipeptide/tripeptide permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family [H]
Homologues:
Organism=Homo sapiens, GI4827008, Length=224, Percent_Identity=29.4642857142857, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI226371746, Length=203, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=5e-12, Organism=Escherichia coli, GI1787922, Length=490, Percent_Identity=25.7142857142857, Blast_Score=152, Evalue=4e-38, Organism=Escherichia coli, GI1789911, Length=488, Percent_Identity=25.8196721311475, Blast_Score=151, Evalue=1e-37, Organism=Escherichia coli, GI1790572, Length=449, Percent_Identity=28.9532293986637, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI1786927, Length=455, Percent_Identity=27.2527472527473, Blast_Score=146, Evalue=4e-36, Organism=Caenorhabditis elegans, GI71987453, Length=367, Percent_Identity=28.6103542234332, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17569141, Length=221, Percent_Identity=28.9592760180996, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI28571102, Length=398, Percent_Identity=24.6231155778894, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI28571100, Length=398, Percent_Identity=24.6231155778894, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI28571098, Length=350, Percent_Identity=26.2857142857143, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI24639585, Length=343, Percent_Identity=26.530612244898, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24639583, Length=343, Percent_Identity=26.530612244898, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24639581, Length=343, Percent_Identity=26.530612244898, Blast_Score=84, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR000109 - InterPro: IPR005279 - InterPro: IPR018456 [H]
Pfam domain/function: PF00854 PTR2 [H]
EC number: NA
Molecular weight: Translated: 57014; Mature: 56883
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS01023 PTR2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEPLDVDAEGVAAATKARGFRPKHLVTGPSRDDKSFLGHPGGLPWMLQVEMWERFSWY CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEHHHHHHHHHH GMRAILVYFITDTLAHGGLGLPINAGQVVMASYGAAVLLMTIPGGIFADRILGPWMSTLC HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHH GGLIIMTGHVILAIPQVVTSWIGLICIAIGTGFIKPNLSTVVGGLYDDGDPRRDQGFLYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCEEEE YMSINIGSLFAPIVTGLLKDHYGYHVGFIAAAIGMALGLIAFFHGRSKLREFAFDIPNPL EEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC APGEGRRMVLRALGIAVVGAVLAIGFKALLGEWTSAIAYALFAFASVTALSYFLTMFRSP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KVSDRERGHLWAFVPLWVGQVLFTMIFEQAAGKMPTFAKDNTDGHIVGSWSVEPEQYQTI CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHCCC NPAAVLILAGLLGMWFRRREGKFPNTPQKFAISVFIIGITALIMGFGFRSWPGGNRLAPW CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH WFLAVVFVIQTVAELFMNPIGLSTATKLAPKKFASQNMTLWLLASACGQGLASVTIERTK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHC NLGDVVFYYSLGIVTILVAVVLFVIAPWTQAKMKDVDSVAEEGDA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SLEPLDVDAEGVAAATKARGFRPKHLVTGPSRDDKSFLGHPGGLPWMLQVEMWERFSWY CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEHHHHHHHHHH GMRAILVYFITDTLAHGGLGLPINAGQVVMASYGAAVLLMTIPGGIFADRILGPWMSTLC HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHHHH GGLIIMTGHVILAIPQVVTSWIGLICIAIGTGFIKPNLSTVVGGLYDDGDPRRDQGFLYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCEEEE YMSINIGSLFAPIVTGLLKDHYGYHVGFIAAAIGMALGLIAFFHGRSKLREFAFDIPNPL EEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC APGEGRRMVLRALGIAVVGAVLAIGFKALLGEWTSAIAYALFAFASVTALSYFLTMFRSP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KVSDRERGHLWAFVPLWVGQVLFTMIFEQAAGKMPTFAKDNTDGHIVGSWSVEPEQYQTI CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHCCC NPAAVLILAGLLGMWFRRREGKFPNTPQKFAISVFIIGITALIMGFGFRSWPGGNRLAPW CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH WFLAVVFVIQTVAELFMNPIGLSTATKLAPKKFASQNMTLWLLASACGQGLASVTIERTK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHC NLGDVVFYYSLGIVTILVAVVLFVIAPWTQAKMKDVDSVAEEGDA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11337471 [H]