| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841626
Identifier: 50841626
GI number: 50841626
Start: 163833
End: 165215
Strand: Direct
Name: 50841626
Synonym: PPA0137
Alternate gene names: NA
Gene position: 163833-165215 (Clockwise)
Preceding gene: 50841625
Following gene: 50841627
Centisome position: 6.4
GC content: 58.28
Gene sequence:
>1383_bases ATGACTCCCATCTTTCGTCTCCATGATTCCCCAGACGGTTCTTCGGCCGTAACATTATTGCGCTCGGTTGCCCCCATCCA ATGGTTCAGCGGGGCAGCTGAGGTCATCGTCGCGTGTCTTTTCGTCACCTGCACCTTCGTAACGGTCGCCCAGCCTGTCT TTGATAATGGCGCATGCCAGTTGATGCTCCCGCTGTTTGCTGTAGCGGCACTGGTACTCGAAGCGTTGTGCATCGTGCGG GATGTTCGAGGGGTACCGTCGCCGCGCGAGTGGTCCCGTTCCCTCACTATCGTGACGTGCAGTTTCGTTGCGCTATTGGT ATGGGCTGCGGTCTCAATCCCGTTTCACGAACATCTCATCTACGACGATTCCATGGGAGTTACCCGGGATCTTCCGCTAT ATGCCCTAGTGATGCCTCTGGCGGAGGCGACGGTTACCCTTCTCGTGGCTATTTTCGCGTGCCGGATGATCGCGGTCGGG AACCTTGAAGGTGCGCTGTGGCGGTTGTCGATGCTGATGGCCATCGCTAACCCAATTGACCTTGTTCGTGAGTACGTCGA AGGCAATACCACCGGATGGCGGGTTGCCACCAGACTCGGTGGGGCCGCCATCTGTCACGTCCTTCTCATCCTGGCCCTGG CCGTTGCTGTGGACGCCGTGATACGACACCGCCACCGGATTCTCTCCAGCGTGGCTGCTGTCAGCCATCTTGGCTGTTTG GCAGCATCCGGGTCTCGCGCCGGAACCATTAGCCTGGCACTATTCGTCATCGGGCTGGTATTTTTCGGACGTTCTTACCG GACGCGCAGCCGGAAACAGCGGACCGTCATCGCAATGTTGGGACTCTTGACAGCAGGGGTAGCCATATGGCTAGTGTCGA CGGTCCGTTCTGGGTCTCTTGTCGATCCGGCGCGTGCGCGAACCTGGGCATTGGCGGGACGTGTTGTTGTGGATTCGCCG AGCCATTTCTTGGTGGGAACCGGATACGGAACAATCTGGCCGTGGTTCGCTGTCGAGTCCACCTTTATGCCCGAATCATC CCACGGGATGCGCCGAACTCTTTATGGTTACAGCCTCCCACACGCCCACAGCCTCATCGCCCAGGTTGTCGGTGAGCTTG GTGTGATCGGGCTGGCCCTGATTTTGGTCTGCCTGGGAACTGTCATCGCGGTGTGTGTCAAGGGAATTCGCGGAGGCTAT CCGCTTTTATCCTTGGGCGTGCTCGCAACAATGCCGGCTTTCCTCATGGACACCTACCTCATCAAGAACTTCCCAGTAGC TCTGTTCTGGTGGATCTTCACCTTGGCACTCTGCCGGTTAGTGACCACCGGTGATGCGGACGTCGAGGGTGATTCAGGCT ACCGCGAGGAGAAGTACGCCTGA
Upstream 100 bases:
>100_bases GTAACAGTAGTCGGGCCGGGCCGCTAAGGTCCGGCCCGATTCTCACATCTCTGCTCGATTTTCCCTGCGCCCCGGAGCGG CCAGCTGCCCCACAGGTAGG
Downstream 100 bases:
>100_bases GAATAAATAACTTTTGGTCGCGCGCGAGTAGTACTTTCGTACTAGCCTATCTTCGTCATTATTCACACTTGTGACGACGC TGTCGCGATGCGATGAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MTPIFRLHDSPDGSSAVTLLRSVAPIQWFSGAAEVIVACLFVTCTFVTVAQPVFDNGACQLMLPLFAVAALVLEALCIVR DVRGVPSPREWSRSLTIVTCSFVALLVWAAVSIPFHEHLIYDDSMGVTRDLPLYALVMPLAEATVTLLVAIFACRMIAVG NLEGALWRLSMLMAIANPIDLVREYVEGNTTGWRVATRLGGAAICHVLLILALAVAVDAVIRHRHRILSSVAAVSHLGCL AASGSRAGTISLALFVIGLVFFGRSYRTRSRKQRTVIAMLGLLTAGVAIWLVSTVRSGSLVDPARARTWALAGRVVVDSP SHFLVGTGYGTIWPWFAVESTFMPESSHGMRRTLYGYSLPHAHSLIAQVVGELGVIGLALILVCLGTVIAVCVKGIRGGY PLLSLGVLATMPAFLMDTYLIKNFPVALFWWIFTLALCRLVTTGDADVEGDSGYREEKYA
Sequences:
>Translated_460_residues MTPIFRLHDSPDGSSAVTLLRSVAPIQWFSGAAEVIVACLFVTCTFVTVAQPVFDNGACQLMLPLFAVAALVLEALCIVR DVRGVPSPREWSRSLTIVTCSFVALLVWAAVSIPFHEHLIYDDSMGVTRDLPLYALVMPLAEATVTLLVAIFACRMIAVG NLEGALWRLSMLMAIANPIDLVREYVEGNTTGWRVATRLGGAAICHVLLILALAVAVDAVIRHRHRILSSVAAVSHLGCL AASGSRAGTISLALFVIGLVFFGRSYRTRSRKQRTVIAMLGLLTAGVAIWLVSTVRSGSLVDPARARTWALAGRVVVDSP SHFLVGTGYGTIWPWFAVESTFMPESSHGMRRTLYGYSLPHAHSLIAQVVGELGVIGLALILVCLGTVIAVCVKGIRGGY PLLSLGVLATMPAFLMDTYLIKNFPVALFWWIFTLALCRLVTTGDADVEGDSGYREEKYA >Mature_459_residues TPIFRLHDSPDGSSAVTLLRSVAPIQWFSGAAEVIVACLFVTCTFVTVAQPVFDNGACQLMLPLFAVAALVLEALCIVRD VRGVPSPREWSRSLTIVTCSFVALLVWAAVSIPFHEHLIYDDSMGVTRDLPLYALVMPLAEATVTLLVAIFACRMIAVGN LEGALWRLSMLMAIANPIDLVREYVEGNTTGWRVATRLGGAAICHVLLILALAVAVDAVIRHRHRILSSVAAVSHLGCLA ASGSRAGTISLALFVIGLVFFGRSYRTRSRKQRTVIAMLGLLTAGVAIWLVSTVRSGSLVDPARARTWALAGRVVVDSPS HFLVGTGYGTIWPWFAVESTFMPESSHGMRRTLYGYSLPHAHSLIAQVVGELGVIGLALILVCLGTVIAVCVKGIRGGYP LLSLGVLATMPAFLMDTYLIKNFPVALFWWIFTLALCRLVTTGDADVEGDSGYREEKYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49586; Mature: 49455
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIFRLHDSPDGSSAVTLLRSVAPIQWFSGAAEVIVACLFVTCTFVTVAQPVFDNGACQ CCCCEEECCCCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LMLPLFAVAALVLEALCIVRDVRGVPSPREWSRSLTIVTCSFVALLVWAAVSIPFHEHLI HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHEE YDDSMGVTRDLPLYALVMPLAEATVTLLVAIFACRMIAVGNLEGALWRLSMLMAIANPID EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHH LVREYVEGNTTGWRVATRLGGAAICHVLLILALAVAVDAVIRHRHRILSSVAAVSHLGCL HHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AASGSRAGTISLALFVIGLVFFGRSYRTRSRKQRTVIAMLGLLTAGVAIWLVSTVRSGSL HCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VDPARARTWALAGRVVVDSPSHFLVGTGYGTIWPWFAVESTFMPESSHGMRRTLYGYSLP CCCHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCC HAHSLIAQVVGELGVIGLALILVCLGTVIAVCVKGIRGGYPLLSLGVLATMPAFLMDTYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IKNFPVALFWWIFTLALCRLVTTGDADVEGDSGYREEKYA HHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TPIFRLHDSPDGSSAVTLLRSVAPIQWFSGAAEVIVACLFVTCTFVTVAQPVFDNGACQ CCCEEECCCCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LMLPLFAVAALVLEALCIVRDVRGVPSPREWSRSLTIVTCSFVALLVWAAVSIPFHEHLI HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHEE YDDSMGVTRDLPLYALVMPLAEATVTLLVAIFACRMIAVGNLEGALWRLSMLMAIANPID EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHH LVREYVEGNTTGWRVATRLGGAAICHVLLILALAVAVDAVIRHRHRILSSVAAVSHLGCL HHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AASGSRAGTISLALFVIGLVFFGRSYRTRSRKQRTVIAMLGLLTAGVAIWLVSTVRSGSL HCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VDPARARTWALAGRVVVDSPSHFLVGTGYGTIWPWFAVESTFMPESSHGMRRTLYGYSLP CCCHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCC HAHSLIAQVVGELGVIGLALILVCLGTVIAVCVKGIRGGYPLLSLGVLATMPAFLMDTYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IKNFPVALFWWIFTLALCRLVTTGDADVEGDSGYREEKYA HHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA