| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is 50841617
Identifier: 50841617
GI number: 50841617
Start: 153556
End: 154731
Strand: Direct
Name: 50841617
Synonym: PPA0128
Alternate gene names: NA
Gene position: 153556-154731 (Clockwise)
Preceding gene: 50841616
Following gene: 50841618
Centisome position: 6.0
GC content: 61.31
Gene sequence:
>1176_bases ATGACGCGTACCGGACGCGCGACGGCTAGGCGATTCGCTCCCACGGCTGACGGACGCCTGGTGGCCCAGACCTGGTTGGG GAGCCGTGCGATCTTGCTAGTCGTCGCTGTGGTTGTCATGACCGGGTACCACCGCACCTTTTCTCAGGTGACGGGGAATT GGGACGTGCAGCACTACATGTCGATCGCGCGCAATGGGTACGCCGATCCTCTCGAGATGGCGTTCTTTCCCGGACTTCCG GCATTGCTGAAAGGTGGCAGCTTCCTTGGTACTCCTATGGAAGTTACCGGGGTACTCCTCGGTCTGATCGGTTCGGCTTT AGCCGCATGGGCTCTCTTCCGGATTGGTGGGATGCTTCCCGCCTGTCTGTGGCTTATTGCCCCGGCAACCGTGTTTACCA TGGTCGGATACACCGAGGCGCTTTTCTGCGCTGCTGCTTTCTGGGCTTGGGAGCGTGCTCGTGCTGGGCGCTGGTGGGCG GCAGCTCTCCTCGCTGGTCTGGCATGCACGTTCCGAGTTTCTGGCCTCTTCCTGATAGGGGCGCTGGCAGTCTTGGCAGT CCTTGGCGATAGGGATGAGGGCCGTCCGACGAGCCAGGCTGCCCGACGTCGCCGCCTCATAGATGTCGTCAATCGATTAT CCACTCTGCTGGTGCCCACTGCGGTGCTGGTGGCTTTCGTGGTGTGGCTACATCGGCTGACAGGGTCGTGGACTGCGTGG TCCCAGGCCCAGACGAATGGGTGGAGACGCGGTTTTACGACCCCGGCGGAGACCTTGCGGCATACTTTGCCCGCCACCCA CGCCGACACCTGGCGGTCCCTCTACGGCGCTGGAGCTAGCGGTGTGGCCGTCGTATTTCGGCTTGAATTGGTTTCGGTGG CGCTGGGTGTCCTGGTGTTTGTCTACTGCCTTGTCCGACGACGTTGGGCTTCGGCGTCCTGGGTGGGCATCCAGGTGGTG GCCTTTTCGATCGGTTACTGGTACATGAGTGTCAACCGTGCCACCTTGTTATGGTTCCCGCTCTTTGTCGCCCTTGCTGA GGTAACTCGTGGCCCGTCTAAACCGCCCGGTCTGGTGCTGCTGTGGCGGGGGATCATGGGCATCGTTATCGCCATTGATC TTGCTGTCATGGTGTGGTGGGGTTGGCGATTTTTTACCGGGGGGTGGGCTAGTTGA
Upstream 100 bases:
>100_bases TCAGGGTGGGGTATGCCGACGATCCCACCGGCGGCGTCCTCGATTACGCCCCAGATCCGGCTCCTGAACCTGTTGAGGAT TCCAGCGCGGAGGTTGCCCG
Downstream 100 bases:
>100_bases GACGTACGGCCTTCATCGGGCCGGGACGCTACCAGCAGGCCATCGGTTCGCTGACCTCTTGGGGGTTAGTGGCACTCGTG GTCGTCGAAGCCTTGGCTGA
Product: membrane spanning protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MTRTGRATARRFAPTADGRLVAQTWLGSRAILLVVAVVVMTGYHRTFSQVTGNWDVQHYMSIARNGYADPLEMAFFPGLP ALLKGGSFLGTPMEVTGVLLGLIGSALAAWALFRIGGMLPACLWLIAPATVFTMVGYTEALFCAAAFWAWERARAGRWWA AALLAGLACTFRVSGLFLIGALAVLAVLGDRDEGRPTSQAARRRRLIDVVNRLSTLLVPTAVLVAFVVWLHRLTGSWTAW SQAQTNGWRRGFTTPAETLRHTLPATHADTWRSLYGAGASGVAVVFRLELVSVALGVLVFVYCLVRRRWASASWVGIQVV AFSIGYWYMSVNRATLLWFPLFVALAEVTRGPSKPPGLVLLWRGIMGIVIAIDLAVMVWWGWRFFTGGWAS
Sequences:
>Translated_391_residues MTRTGRATARRFAPTADGRLVAQTWLGSRAILLVVAVVVMTGYHRTFSQVTGNWDVQHYMSIARNGYADPLEMAFFPGLP ALLKGGSFLGTPMEVTGVLLGLIGSALAAWALFRIGGMLPACLWLIAPATVFTMVGYTEALFCAAAFWAWERARAGRWWA AALLAGLACTFRVSGLFLIGALAVLAVLGDRDEGRPTSQAARRRRLIDVVNRLSTLLVPTAVLVAFVVWLHRLTGSWTAW SQAQTNGWRRGFTTPAETLRHTLPATHADTWRSLYGAGASGVAVVFRLELVSVALGVLVFVYCLVRRRWASASWVGIQVV AFSIGYWYMSVNRATLLWFPLFVALAEVTRGPSKPPGLVLLWRGIMGIVIAIDLAVMVWWGWRFFTGGWAS >Mature_390_residues TRTGRATARRFAPTADGRLVAQTWLGSRAILLVVAVVVMTGYHRTFSQVTGNWDVQHYMSIARNGYADPLEMAFFPGLPA LLKGGSFLGTPMEVTGVLLGLIGSALAAWALFRIGGMLPACLWLIAPATVFTMVGYTEALFCAAAFWAWERARAGRWWAA ALLAGLACTFRVSGLFLIGALAVLAVLGDRDEGRPTSQAARRRRLIDVVNRLSTLLVPTAVLVAFVVWLHRLTGSWTAWS QAQTNGWRRGFTTPAETLRHTLPATHADTWRSLYGAGASGVAVVFRLELVSVALGVLVFVYCLVRRRWASASWVGIQVVA FSIGYWYMSVNRATLLWFPLFVALAEVTRGPSKPPGLVLLWRGIMGIVIAIDLAVMVWWGWRFFTGGWAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21361771, Length=150, Percent_Identity=32.6666666666667, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42807; Mature: 42676
Theoretical pI: Translated: 11.69; Mature: 11.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTGRATARRFAPTADGRLVAQTWLGSRAILLVVAVVVMTGYHRTFSQVTGNWDVQHYM CCCCCCHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHH SIARNGYADPLEMAFFPGLPALLKGGSFLGTPMEVTGVLLGLIGSALAAWALFRIGGMLP HHHHCCCCCHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACLWLIAPATVFTMVGYTEALFCAAAFWAWERARAGRWWAAALLAGLACTFRVSGLFLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ALAVLAVLGDRDEGRPTSQAARRRRLIDVVNRLSTLLVPTAVLVAFVVWLHRLTGSWTAW HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SQAQTNGWRRGFTTPAETLRHTLPATHADTWRSLYGAGASGVAVVFRLELVSVALGVLVF CHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VYCLVRRRWASASWVGIQVVAFSIGYWYMSVNRATLLWFPLFVALAEVTRGPSKPPGLVL HHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHH LWRGIMGIVIAIDLAVMVWWGWRFFTGGWAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TRTGRATARRFAPTADGRLVAQTWLGSRAILLVVAVVVMTGYHRTFSQVTGNWDVQHYM CCCCCHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHH SIARNGYADPLEMAFFPGLPALLKGGSFLGTPMEVTGVLLGLIGSALAAWALFRIGGMLP HHHHCCCCCHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACLWLIAPATVFTMVGYTEALFCAAAFWAWERARAGRWWAAALLAGLACTFRVSGLFLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ALAVLAVLGDRDEGRPTSQAARRRRLIDVVNRLSTLLVPTAVLVAFVVWLHRLTGSWTAW HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SQAQTNGWRRGFTTPAETLRHTLPATHADTWRSLYGAGASGVAVVFRLELVSVALGVLVF CHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VYCLVRRRWASASWVGIQVVAFSIGYWYMSVNRATLLWFPLFVALAEVTRGPSKPPGLVL HHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHH LWRGIMGIVIAIDLAVMVWWGWRFFTGGWAS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA