| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841618
Identifier: 50841618
GI number: 50841618
Start: 154728
End: 156065
Strand: Direct
Name: 50841618
Synonym: PPA0129
Alternate gene names: NA
Gene position: 154728-156065 (Clockwise)
Preceding gene: 50841617
Following gene: 50841620
Centisome position: 6.04
GC content: 62.33
Gene sequence:
>1338_bases TTGAGACGTACGGCCTTCATCGGGCCGGGACGCTACCAGCAGGCCATCGGTTCGCTGACCTCTTGGGGGTTAGTGGCACT CGTGGTCGTCGAAGCCTTGGCTGATTTTCGGCATGGACTCACCTCGCCGCCGTGGATCGTCAGTAGCTATCTCATTGTTG ATGTGCTGATCATCCTGGCTTGTGGACCTGCGTTGTGGCTGCGTCGTCATGACCTTGGACGGGCCGGACGGTGGATGCTC GGCGGAGCCTTGGGTTTCATGGTGTGGGCTATCGTCTCGGCATCCTTCTGCCCGCTGCCTAATCTCGGACCGGGGCCGGT GGCCAGGCTCTTGTTAGTGATGGCTCCCGTCACTGCGGTTGCGACTCTGCTCGCCGGCCTGTCCGTGGCCGCGGGGCTGA CGATCAGGTCCTCTGGACGGATGGTGATCGAACGATTGTGGTGGCCTGCTGCGGCCATGACGTGCGTGTCTTATCTCCAG TGGCCTCGCGCCATGAAGGTGCACGGATCCACCCGACTCGCGACCGGTATGGGTGGTTCTGCGGTGCTCCACGTTGCCTT ATTGCTGGCTTGTGGTGTGTTGGTGGCGGCTGCGGTGGCCGGTTGCCGGCGCGTCGCCAGCGGGATACTGGCTACTGGCG CGCTTGTCGCTGTCATACTGACGGGTTCGCGAGCCGGGCTGGCCTGTGCGACCCTGTTCGTGCTCGGATGCGCGATTGGC TTGGTGGTATGGCGCCGCTCCCGGGTGGTGAGACGGGCGGGTCATAGACGAATGGTCTGGGGAGCGCTCGTAGCACTGGC TGTAGTCGTCATCGGTATGGTGATTGTGGTTCCTGGGCTTCGACGCATGCTGAACCCGTCTGATCCGATGAGGTCCCGCA CGCTGCGCACCGGAATACAGGTGTGGTCGAGCGACCTTAACCATGTTTTCTTCGGGCTCGGATCGGGGCGTTTGTGGCCA TGGTATTTGTACGACTGTCATGCCCGGCAGGAGCCGTGGCGCGAGTTAATGACGACGCAGTGGGGACCCACCCTCAGCAG CGCACACTCCACCGTGTTAGCGGTCCTTGTGGAGCTCGGTTTGCTGGGCTTTGTTCTGCTCCTGCCCGTTCTACTAGGCC CCGTGGTGGAGTTGGTTCGCCGTCTGTTTGACGGTACTGGCTCTCCTGCGGAGGTCGTGCTGCGCTGGGCGGTCGTCGCC ACGTTGCCAGCTTTCCTCGTTGATACTTACTTGGTCAAAAACTTCGGCGTGAGTATGTGGTGGTGGGTGGTCACCCTGTC GAGCGTGGCGTGGACTGATCAGCGTCCGCCCAGCACCTCGCGACAGAATTCGGGGTAG
Upstream 100 bases:
>100_bases TGGTGCTGCTGTGGCGGGGGATCATGGGCATCGTTATCGCCATTGATCTTGCTGTCATGGTGTGGTGGGGTTGGCGATTT TTTACCGGGGGGTGGGCTAG
Downstream 100 bases:
>100_bases ACGACAGAGGCGCGGAACTTTTCTTCCCACACCTGGCGGGAGGCCTGACACACCTGCTGGTACTCGTCCTCAGACAGACG TGCCAGCTGCACTAACGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MRRTAFIGPGRYQQAIGSLTSWGLVALVVVEALADFRHGLTSPPWIVSSYLIVDVLIILACGPALWLRRHDLGRAGRWML GGALGFMVWAIVSASFCPLPNLGPGPVARLLLVMAPVTAVATLLAGLSVAAGLTIRSSGRMVIERLWWPAAAMTCVSYLQ WPRAMKVHGSTRLATGMGGSAVLHVALLLACGVLVAAAVAGCRRVASGILATGALVAVILTGSRAGLACATLFVLGCAIG LVVWRRSRVVRRAGHRRMVWGALVALAVVVIGMVIVVPGLRRMLNPSDPMRSRTLRTGIQVWSSDLNHVFFGLGSGRLWP WYLYDCHARQEPWRELMTTQWGPTLSSAHSTVLAVLVELGLLGFVLLLPVLLGPVVELVRRLFDGTGSPAEVVLRWAVVA TLPAFLVDTYLVKNFGVSMWWWVVTLSSVAWTDQRPPSTSRQNSG
Sequences:
>Translated_445_residues MRRTAFIGPGRYQQAIGSLTSWGLVALVVVEALADFRHGLTSPPWIVSSYLIVDVLIILACGPALWLRRHDLGRAGRWML GGALGFMVWAIVSASFCPLPNLGPGPVARLLLVMAPVTAVATLLAGLSVAAGLTIRSSGRMVIERLWWPAAAMTCVSYLQ WPRAMKVHGSTRLATGMGGSAVLHVALLLACGVLVAAAVAGCRRVASGILATGALVAVILTGSRAGLACATLFVLGCAIG LVVWRRSRVVRRAGHRRMVWGALVALAVVVIGMVIVVPGLRRMLNPSDPMRSRTLRTGIQVWSSDLNHVFFGLGSGRLWP WYLYDCHARQEPWRELMTTQWGPTLSSAHSTVLAVLVELGLLGFVLLLPVLLGPVVELVRRLFDGTGSPAEVVLRWAVVA TLPAFLVDTYLVKNFGVSMWWWVVTLSSVAWTDQRPPSTSRQNSG >Mature_445_residues MRRTAFIGPGRYQQAIGSLTSWGLVALVVVEALADFRHGLTSPPWIVSSYLIVDVLIILACGPALWLRRHDLGRAGRWML GGALGFMVWAIVSASFCPLPNLGPGPVARLLLVMAPVTAVATLLAGLSVAAGLTIRSSGRMVIERLWWPAAAMTCVSYLQ WPRAMKVHGSTRLATGMGGSAVLHVALLLACGVLVAAAVAGCRRVASGILATGALVAVILTGSRAGLACATLFVLGCAIG LVVWRRSRVVRRAGHRRMVWGALVALAVVVIGMVIVVPGLRRMLNPSDPMRSRTLRTGIQVWSSDLNHVFFGLGSGRLWP WYLYDCHARQEPWRELMTTQWGPTLSSAHSTVLAVLVELGLLGFVLLLPVLLGPVVELVRRLFDGTGSPAEVVLRWAVVA TLPAFLVDTYLVKNFGVSMWWWVVTLSSVAWTDQRPPSTSRQNSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47897; Mature: 47897
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTAFIGPGRYQQAIGSLTSWGLVALVVVEALADFRHGLTSPPWIVSSYLIVDVLIILA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH CGPALWLRRHDLGRAGRWMLGGALGFMVWAIVSASFCPLPNLGPGPVARLLLVMAPVTAV CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH ATLLAGLSVAAGLTIRSSGRMVIERLWWPAAAMTCVSYLQWPRAMKVHGSTRLATGMGGS HHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCHHCCCCCHH AVLHVALLLACGVLVAAAVAGCRRVASGILATGALVAVILTGSRAGLACATLFVLGCAIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LVVWRRSRVVRRAGHRRMVWGALVALAVVVIGMVIVVPGLRRMLNPSDPMRSRTLRTGIQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VWSSDLNHVFFGLGSGRLWPWYLYDCHARQEPWRELMTTQWGPTLSSAHSTVLAVLVELG HHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LLGFVLLLPVLLGPVVELVRRLFDGTGSPAEVVLRWAVVATLPAFLVDTYLVKNFGVSMW HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH WWVVTLSSVAWTDQRPPSTSRQNSG HHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRRTAFIGPGRYQQAIGSLTSWGLVALVVVEALADFRHGLTSPPWIVSSYLIVDVLIILA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH CGPALWLRRHDLGRAGRWMLGGALGFMVWAIVSASFCPLPNLGPGPVARLLLVMAPVTAV CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH ATLLAGLSVAAGLTIRSSGRMVIERLWWPAAAMTCVSYLQWPRAMKVHGSTRLATGMGGS HHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCHHCCCCCHH AVLHVALLLACGVLVAAAVAGCRRVASGILATGALVAVILTGSRAGLACATLFVLGCAIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LVVWRRSRVVRRAGHRRMVWGALVALAVVVIGMVIVVPGLRRMLNPSDPMRSRTLRTGIQ HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VWSSDLNHVFFGLGSGRLWPWYLYDCHARQEPWRELMTTQWGPTLSSAHSTVLAVLVELG HHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LLGFVLLLPVLLGPVVELVRRLFDGTGSPAEVVLRWAVVATLPAFLVDTYLVKNFGVSMW HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH WWVVTLSSVAWTDQRPPSTSRQNSG HHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA