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The map label for this gene is 50841616

Identifier: 50841616

GI number: 50841616

Start: 152012

End: 153559

Strand: Direct

Name: 50841616

Synonym: PPA0127

Alternate gene names: NA

Gene position: 152012-153559 (Clockwise)

Preceding gene: 50841615

Following gene: 50841617

Centisome position: 5.94

GC content: 61.69

Gene sequence:

>1548_bases
GTGACCATCCCTGATCCGAAAGACGACGCCATGGCAGCTAGGAGGTGTGCTGTCGCACACCCAAATGATGGATCCCCGGG
TTACACGGCTCGCCGTGGCCTTGATGTTCCGCGCGGATCCCGTGTGTCTCAACTGGGACTGGACCGTCGCATCGGCGGGC
GTATGGGCCGCCATGCCTGGCCGCGCGGCGTCTTCTTTGATCCGGGCCCCTGGGCCATCATGAGTGCCATCGTTGTCTGG
TTATTGACGATCTATCGCGTTACCCCGTGTGTGCAGCACGATGTAGCTAAGGCCGTCGATCCATATCAGCGGCAGTGCTA
CTCGGATATCCCGACGCTGTATCGGTCGTCAGGGATGGGTCATGGCGGGTCGTTGTTCGCGAACCCTGATATTGCCCAGA
CCCCTCTGGTAACCGTTCTCATGGCATTTTGCCGTCGAGTGGTGTGGGCTTTTGGTGCAGAGGTCTCCCCGAAGGCCACG
GATCAGCAAGTCCTGGACGCCGCCAATGCCTACTGGGGAGTGGCCCAGATAGTGCTCTTTGTGGCTTTTCTGGCCGTCGC
GATCTCCGTCATGCTGCTGGGGCGCGGATCGGACACCAATCTTCCGGTCGATGATAAGGGCCGCCCGACCCAGGCGCGGA
GGCGATCTTGGGATGTTTTCTGGGTGGTGCTGTGTCCGGCGGTGTACCTCGCGGGTCTCATCGACTTTTCCATGGTTCCG
GTTGCCTTAGCGACGACGTCCATGCTGGCCTGGGCTCGTCGTCGCCCGTGGTTGGCCGGGATCCTGATGGGCCTGGCCTG
CGCGGGGAGCCTCCAGGCGGCCGTGGTGGCTTTTGCCGTCTTGGTGTGCTGTTTGCGTGCGACGCGGTTGCCGGAGTTGG
GACGGTACCTCCTGGCGGGATCCCTGGTGCTGGTGGTGTGCCACGTCATCGCGGTCTGTTTGGGCTTGCACACCTGGTGG
GCCTATCTGCGTTCGACTTTCTGGTCGGGTACTGGCCTGGGAACGATTTGGTACGTCATTCAGGACTCTTCTGGTGGCAC
AATTCCGGGAATTGGTTGGATTACGGGCACCTTGACGGTGGGCGGTCTGCTTGGCCTGGCGTGGCTGTCGATGACGGTGC
CGAGGCGTCCGCGCATCGCCCAGGTGGCCTGCGTGGCCCTGTTGATTTTGTTCATCACTAATAAGGTGTATTCGCCGCAG
TGGATGCTCTTTCTGGTCCCGCTTGCTGCTTTGGCCCGTCCTGACCTGCGGGATTGGGCTGTGCTCATGGTGGGTGAGTG
CTTCTACTCCTTGGCTGTGTGGGCTCATTTGGGTGGGCTTTCTCTGCCTGGTGGTTCTGACGCTGACGTCGTGTACTGGG
CGTCGGTAGTGCTACGTCTGGCCTGCGAGATGTGGTTCGCGTGGGGTGTCCTGGATGACATCCGACGACCTTGGAACGAC
GTCGTCAGGGTGGGGTATGCCGACGATCCCACCGGCGGCGTCCTCGATTACGCCCCAGATCCGGCTCCTGAACCTGTTGA
GGATTCCAGCGCGGAGGTTGCCCGATGA

Upstream 100 bases:

>100_bases
GACTCATACCTCCACCCACACCTCTCGTCCGACCTCGGGCGAGACGACGCACGGTGGGAACCAGCTGAGTGGTCGGGCAC
AGAATGGGTAGCCTGACCAC

Downstream 100 bases:

>100_bases
CGCGTACCGGACGCGCGACGGCTAGGCGATTCGCTCCCACGGCTGACGGACGCCTGGTGGCCCAGACCTGGTTGGGGAGC
CGTGCGATCTTGCTAGTCGT

Product: membrane spanning protein

Products: NA

Alternate protein names: Transmembrane Protein; Integral Membrane Protein-Like Protein; Membrane Spanning Protein

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MTIPDPKDDAMAARRCAVAHPNDGSPGYTARRGLDVPRGSRVSQLGLDRRIGGRMGRHAWPRGVFFDPGPWAIMSAIVVW
LLTIYRVTPCVQHDVAKAVDPYQRQCYSDIPTLYRSSGMGHGGSLFANPDIAQTPLVTVLMAFCRRVVWAFGAEVSPKAT
DQQVLDAANAYWGVAQIVLFVAFLAVAISVMLLGRGSDTNLPVDDKGRPTQARRRSWDVFWVVLCPAVYLAGLIDFSMVP
VALATTSMLAWARRRPWLAGILMGLACAGSLQAAVVAFAVLVCCLRATRLPELGRYLLAGSLVLVVCHVIAVCLGLHTWW
AYLRSTFWSGTGLGTIWYVIQDSSGGTIPGIGWITGTLTVGGLLGLAWLSMTVPRRPRIAQVACVALLILFITNKVYSPQ
WMLFLVPLAALARPDLRDWAVLMVGECFYSLAVWAHLGGLSLPGGSDADVVYWASVVLRLACEMWFAWGVLDDIRRPWND
VVRVGYADDPTGGVLDYAPDPAPEPVEDSSAEVAR

Sequences:

>Translated_515_residues
MTIPDPKDDAMAARRCAVAHPNDGSPGYTARRGLDVPRGSRVSQLGLDRRIGGRMGRHAWPRGVFFDPGPWAIMSAIVVW
LLTIYRVTPCVQHDVAKAVDPYQRQCYSDIPTLYRSSGMGHGGSLFANPDIAQTPLVTVLMAFCRRVVWAFGAEVSPKAT
DQQVLDAANAYWGVAQIVLFVAFLAVAISVMLLGRGSDTNLPVDDKGRPTQARRRSWDVFWVVLCPAVYLAGLIDFSMVP
VALATTSMLAWARRRPWLAGILMGLACAGSLQAAVVAFAVLVCCLRATRLPELGRYLLAGSLVLVVCHVIAVCLGLHTWW
AYLRSTFWSGTGLGTIWYVIQDSSGGTIPGIGWITGTLTVGGLLGLAWLSMTVPRRPRIAQVACVALLILFITNKVYSPQ
WMLFLVPLAALARPDLRDWAVLMVGECFYSLAVWAHLGGLSLPGGSDADVVYWASVVLRLACEMWFAWGVLDDIRRPWND
VVRVGYADDPTGGVLDYAPDPAPEPVEDSSAEVAR
>Mature_514_residues
TIPDPKDDAMAARRCAVAHPNDGSPGYTARRGLDVPRGSRVSQLGLDRRIGGRMGRHAWPRGVFFDPGPWAIMSAIVVWL
LTIYRVTPCVQHDVAKAVDPYQRQCYSDIPTLYRSSGMGHGGSLFANPDIAQTPLVTVLMAFCRRVVWAFGAEVSPKATD
QQVLDAANAYWGVAQIVLFVAFLAVAISVMLLGRGSDTNLPVDDKGRPTQARRRSWDVFWVVLCPAVYLAGLIDFSMVPV
ALATTSMLAWARRRPWLAGILMGLACAGSLQAAVVAFAVLVCCLRATRLPELGRYLLAGSLVLVVCHVIAVCLGLHTWWA
YLRSTFWSGTGLGTIWYVIQDSSGGTIPGIGWITGTLTVGGLLGLAWLSMTVPRRPRIAQVACVALLILFITNKVYSPQW
MLFLVPLAALARPDLRDWAVLMVGECFYSLAVWAHLGGLSLPGGSDADVVYWASVVLRLACEMWFAWGVLDDIRRPWNDV
VRVGYADDPTGGVLDYAPDPAPEPVEDSSAEVAR

Specific function: Unknown

COG id: COG5650

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56025; Mature: 55894

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TIPDPKDDAMAARRCAVAHPNDGSPGYTARRGLDVPRGSRVSQLGLDRRIGGRMGRHAW
CCCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHHHCCHHHHHHHCCCCCC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HEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA