| Definition | Mesoplasma florum L1, complete genome. |
|---|---|
| Accession | NC_006055 |
| Length | 793,224 |
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The map label for this gene is gltX [H]
Identifier: 50365466
GI number: 50365466
Start: 756205
End: 757653
Strand: Reverse
Name: gltX [H]
Synonym: Mfl651
Alternate gene names: 50365466
Gene position: 757653-756205 (Counterclockwise)
Preceding gene: 50365467
Following gene: 50365465
Centisome position: 95.52
GC content: 26.85
Gene sequence:
>1449_bases ATGACTAAGTTCAGATTAAGATATGCACCATCGCCAACTGGTTTCTTACACATTGGAAACACAAGAACAGCTTTAATGAA TTATTTATTTGCTAAACATTATAATGGTGATTTTATTGTAAGAATAGAAGATACTGATTTAGAAAGAAATGTTGAAGGAG CAATTGAATCACAATTTGAAAACTTAAATTGGCTTGGAATAAATGCAGATGAATCATTTTTAAAACCTGGTGAAGAGAAG TATGGTAAGTACATGCAATCTCAAAAATTTGGTAGATATCAAGAACTTGCTGAAAAACTTATTTCAATAAAAAAAGCATA TCGTTGTTTTTGTACAACTGAAGAATTGGAAAAAGATTATGAAGATCAAGTTGCAAAAGGCATAGTTGCTACTAAGTACT CTGGGAAGTGCTCAAGATTAAGTGAAAGTGAAATTGAGTCAAATTTAAAATCGAATAAAGATTTTTCAATTAGATTTTTA GTTCCTGAAACTACTTTGAATATTAAAGACTTTATAAAAGGTGAAATTACATTTGATTCTAAGGAGTTAGGAGATTTTGT TATTTTAAAAACTAATAAAATAGCGACATATAACTTTGCTGTTGTTGTTGATGATTTTGACATGGAAATTTCTCATGTTT TAAGAGGTGAAGAACATATTTCAAATACTCCAAGACAAATTTTAATTTATCAAGCTTTTGGATGAGAAACACCTCAATTT GGACATATGTCATTAATTGTTGATTCTACAGGTAAAAAATTGTCAAAAAGAAGTGGTAATGCATTATTTTTCATTGAGCA GTATAAAAATCAAGGTTATTTACCAGAGGCAATGTTTAATTACATTTCTTTATTAGGTTGATCACCAATTGGAGAAAAAG AATTGTTGACTAAGCAAGAATTAATTTCAATGTTTGATGATAAAAGATTTAGTAAATCTCCTTCAACATTTGATATGACA AAAATGAAGTGAATAAATTCTCAATATATGAAAGCCTTATCTGAAGAAGAATATTTAGAATTTACTAAAAAATACATTAA TACTGAAATGTTTAATACTAAAGAGAAATCTGAAGATTGATTAAATCAAGTTTTACTTTTATTTAAAAAAGAATTAGAGT TTGCTGATCAAATCAATAATCATTTAAATATATTCTTTAATGAAGTTGATGTTACAAGTGAAACAATTGAAATATTGAAA ACAATTGAAGAGCATGAAAGTGTCATTAAAGAATTTGAAACTCAAATATCTACTTTAAACGAATGAGAAATCGAAAATAT TAAATCTTTAATTAAATTAGTTAGCGAAAATACTGGTAAAAAAGGTAAAGATTTATTTATGCCTATCAGAATTGCTTCTT CAAGCTCTGAACATGGTCCTTCACTAGCTGATGTTATTTATTTATTAGGTAAAGATAAGGTTTTAGCAAACATAGCTAAG GTTAAATAG
Upstream 100 bases:
>100_bases AAAAAGAAAACTTAAAAAAAGCGTCAAAAGATAAAAAGAAAACAAACAAATAAAAAAATTGATAAAATATATAAAGTTTG AAAATTACAAAGGAGAATAC
Downstream 100 bases:
>100_bases GTAATTATTATGGAAAAAGTTTTTAGAGATAGTATTCACGGTGACATATTTATTCATGATGAGATTTTTATGGAAATAAT TAATTCACCAGAAATGCAAA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MTKFRLRYAPSPTGFLHIGNTRTALMNYLFAKHYNGDFIVRIEDTDLERNVEGAIESQFENLNWLGINADESFLKPGEEK YGKYMQSQKFGRYQELAEKLISIKKAYRCFCTTEELEKDYEDQVAKGIVATKYSGKCSRLSESEIESNLKSNKDFSIRFL VPETTLNIKDFIKGEITFDSKELGDFVILKTNKIATYNFAVVVDDFDMEISHVLRGEEHISNTPRQILIYQAFGWETPQF GHMSLIVDSTGKKLSKRSGNALFFIEQYKNQGYLPEAMFNYISLLGWSPIGEKELLTKQELISMFDDKRFSKSPSTFDMT KMKWINSQYMKALSEEEYLEFTKKYINTEMFNTKEKSEDWLNQVLLLFKKELEFADQINNHLNIFFNEVDVTSETIEILK TIEEHESVIKEFETQISTLNEWEIENIKSLIKLVSENTGKKGKDLFMPIRIASSSSEHGPSLADVIYLLGKDKVLANIAK VK
Sequences:
>Translated_482_residues MTKFRLRYAPSPTGFLHIGNTRTALMNYLFAKHYNGDFIVRIEDTDLERNVEGAIESQFENLNWLGINADESFLKPGEEK YGKYMQSQKFGRYQELAEKLISIKKAYRCFCTTEELEKDYEDQVAKGIVATKYSGKCSRLSESEIESNLKSNKDFSIRFL VPETTLNIKDFIKGEITFDSKELGDFVILKTNKIATYNFAVVVDDFDMEISHVLRGEEHISNTPRQILIYQAFG*ETPQF GHMSLIVDSTGKKLSKRSGNALFFIEQYKNQGYLPEAMFNYISLLG*SPIGEKELLTKQELISMFDDKRFSKSPSTFDMT KMK*INSQYMKALSEEEYLEFTKKYINTEMFNTKEKSED*LNQVLLLFKKELEFADQINNHLNIFFNEVDVTSETIEILK TIEEHESVIKEFETQISTLNE*EIENIKSLIKLVSENTGKKGKDLFMPIRIASSSSEHGPSLADVIYLLGKDKVLANIAK VK >Mature_481_residues TKFRLRYAPSPTGFLHIGNTRTALMNYLFAKHYNGDFIVRIEDTDLERNVEGAIESQFENLNWLGINADESFLKPGEEKY GKYMQSQKFGRYQELAEKLISIKKAYRCFCTTEELEKDYEDQVAKGIVATKYSGKCSRLSESEIESNLKSNKDFSIRFLV PETTLNIKDFIKGEITFDSKELGDFVILKTNKIATYNFAVVVDDFDMEISHVLRGEEHISNTPRQILIYQAFG*ETPQFG HMSLIVDSTGKKLSKRSGNALFFIEQYKNQGYLPEAMFNYISLLG*SPIGEKELLTKQELISMFDDKRFSKSPSTFDMTK MK*INSQYMKALSEEEYLEFTKKYINTEMFNTKEKSED*LNQVLLLFKKELEFADQINNHLNIFFNEVDVTSETIEILKT IEEHESVIKEFETQISTLNE*EIENIKSLIKLVSENTGKKGKDLFMPIRIASSSSEHGPSLADVIYLLGKDKVLANIAKV K
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=494, Percent_Identity=31.5789473684211, Blast_Score=248, Evalue=8e-66, Organism=Escherichia coli, GI1788743, Length=483, Percent_Identity=35.6107660455487, Blast_Score=300, Evalue=1e-82, Organism=Escherichia coli, GI226510925, Length=258, Percent_Identity=32.9457364341085, Blast_Score=123, Evalue=3e-29, Organism=Caenorhabditis elegans, GI71993394, Length=472, Percent_Identity=33.0508474576271, Blast_Score=209, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6324540, Length=486, Percent_Identity=32.9218106995885, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6324742, Length=318, Percent_Identity=27.3584905660377, Blast_Score=91, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6321192, Length=251, Percent_Identity=25.8964143426295, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24665321, Length=495, Percent_Identity=32.5252525252525, Blast_Score=236, Evalue=2e-62,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 54784; Mature: 54653
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFRLRYAPSPTGFLHIGNTRTALMNYLFAKHYNGDFIVRIEDTDLERNVEGAIESQFE CCCEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHC NLNWLGINADESFLKPGEEKYGKYMQSQKFGRYQELAEKLISIKKAYRCFCTTEELEKDY CCEEEEECCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EDQVAKGIVATKYSGKCSRLSESEIESNLKSNKDFSIRFLVPETTLNIKDFIKGEITFDS HHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHCCEEEECC KELGDFVILKTNKIATYNFAVVVDDFDMEISHVLRGEEHISNTPRQILIYQAFGETPQFG HHHCCEEEEEECEEEEEEEEEEEECCCHHHHHHHCCCHHHCCCCCEEEEEEECCCCCCCC HMSLIVDSTGKKLSKRSGNALFFIEQYKNQGYLPEAMFNYISLLGSPIGEKELLTKQELI CEEEEEECCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH SMFDDKRFSKSPSTFDMTKMKINSQYMKALSEEEYLEFTKKYINTEMFNTKEKSEDLNQV HHHHCCCCCCCCCCCCHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LLLFKKELEFADQINNHLNIFFNEVDVTSETIEILKTIEEHESVIKEFETQISTLNEEIE HHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIKSLIKLVSENTGKKGKDLFMPIRIASSSSEHGPSLADVIYLLGKDKVLANIAKVK HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure TKFRLRYAPSPTGFLHIGNTRTALMNYLFAKHYNGDFIVRIEDTDLERNVEGAIESQFE CCEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHC NLNWLGINADESFLKPGEEKYGKYMQSQKFGRYQELAEKLISIKKAYRCFCTTEELEKDY CCEEEEECCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EDQVAKGIVATKYSGKCSRLSESEIESNLKSNKDFSIRFLVPETTLNIKDFIKGEITFDS HHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHCCEEEECC KELGDFVILKTNKIATYNFAVVVDDFDMEISHVLRGEEHISNTPRQILIYQAFGETPQFG HHHCCEEEEEECEEEEEEEEEEEECCCHHHHHHHCCCHHHCCCCCEEEEEEECCCCCCCC HMSLIVDSTGKKLSKRSGNALFFIEQYKNQGYLPEAMFNYISLLGSPIGEKELLTKQELI CEEEEEECCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH SMFDDKRFSKSPSTFDMTKMKINSQYMKALSEEEYLEFTKKYINTEMFNTKEKSEDLNQV HHHHCCCCCCCCCCCCHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LLLFKKELEFADQINNHLNIFFNEVDVTSETIEILKTIEEHESVIKEFETQISTLNEEIE HHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIKSLIKLVSENTGKKGKDLFMPIRIASSSSEHGPSLADVIYLLGKDKVLANIAKVK HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA