| Definition | Mesoplasma florum L1, complete genome. |
|---|---|
| Accession | NC_006055 |
| Length | 793,224 |
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The map label for this gene is ywfO [H]
Identifier: 50365465
GI number: 50365465
Start: 754987
End: 756195
Strand: Reverse
Name: ywfO [H]
Synonym: Mfl650
Alternate gene names: 50365465
Gene position: 756195-754987 (Counterclockwise)
Preceding gene: 50365466
Following gene: 50365464
Centisome position: 95.33
GC content: 25.89
Gene sequence:
>1209_bases ATGGAAAAAGTTTTTAGAGATAGTATTCACGGTGACATATTTATTCATGATGAGATTTTTATGGAAATAATTAATTCACC AGAAATGCAAAGATTAAGAAGAATTCTTCAATTAGGTGGAGCTCAATTTGCTTATGCTGGAGCAACACATACAAGATTTA CTCATTGTTTAGGTGTTTACCATATCATTTCACAATTTCTTAAAGCACCAGATTTTGAAAAAATATCAGCTAAAGAAAAG AAAATAGTTTTACTTGCAGGTTTAATGCACGATATTGGTCATGGTCCGTTTTCTCATACATTTGAAAAAATAAGCAATAG AAGTCATGAAGAATATAGTGCTGACATAATTAGAAATCCTGAAGGAAACATTTCAAAAATTTTAAAAAAACACAAGGTGG ATCCTGAAGATATAATTGCTATACTAGAAGGTAAATATCCAAATAAAGTTTTAAATTCATTAGTTAGCAGTCAATTAGAT GCAGATAGAATAGACTACTTGATGAGAGATTCATATTACTGTGGTGTTAATTATTCTTCACTAGATACAGAATTTTTAAT TAGAAATGTTAGAATTATGGATGACAAAATTGTATTCCCTAAAAAAACAATTCATGCAATTGAGTCATATTTACTTGGAA GATACCACATGTATAAGCAAGTTTATGAACATAAAATATCAACAGCTTTTGATGTAACACTTATAAGTTGATTTGAAAGA ATTATTGATTTAAATGAAAAAGGGTATAAATTTTTGGATGATAGAATAAATAATTATTTTAGTTATATTTTTAATGGACA AAATATCCCAATACATTTATACTTAATTTTAGATGATTTCACGATGTTTGATATCATGAAAAGTTGTCAAAAAGAAAATG ACCATATTCTTAATGATTTATCTGATCGATTAATTAATAGAAATTTCTTAAAATTAAAAGAGGCAGATGAATTTAAAATA AGAGAAATTAAAACCTTATTAAAAGAAGAGGGCAAAGATCCTAAATACTATTTTATTGAACCTAAGGTTAAAAAACCTAG CATTTATAAAGATGGTGTAACAGATGGCAAAGATCAAACTATTTATATAGTTGATAAAAACAATGTGGTAAAATCATTAA CTAAATTTAGTTTATTGGCTAATACAGTTAAATTAATCGAAGATGAAAAAACAATTAAAAAATACTTTTTTCCAAAAGAA GTAATGTAA
Upstream 100 bases:
>100_bases TTCAAGCTCTGAACATGGTCCTTCACTAGCTGATGTTATTTATTTATTAGGTAAAGATAAGGTTTTAGCAAACATAGCTA AGGTTAAATAGGTAATTATT
Downstream 100 bases:
>100_bases ATATAGAGAGTAAGGGTGAATAGAATGGAAAGTTTATCAAATATTGACTTGGCTTATGAACTTTTAAGAAAACGTAAAAG TCCAATGAAATTAATGGCTA
Product: HD phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MEKVFRDSIHGDIFIHDEIFMEIINSPEMQRLRRILQLGGAQFAYAGATHTRFTHCLGVYHIISQFLKAPDFEKISAKEK KIVLLAGLMHDIGHGPFSHTFEKISNRSHEEYSADIIRNPEGNISKILKKHKVDPEDIIAILEGKYPNKVLNSLVSSQLD ADRIDYLMRDSYYCGVNYSSLDTEFLIRNVRIMDDKIVFPKKTIHAIESYLLGRYHMYKQVYEHKISTAFDVTLISWFER IIDLNEKGYKFLDDRINNYFSYIFNGQNIPIHLYLILDDFTMFDIMKSCQKENDHILNDLSDRLINRNFLKLKEADEFKI REIKTLLKEEGKDPKYYFIEPKVKKPSIYKDGVTDGKDQTIYIVDKNNVVKSLTKFSLLANTVKLIEDEKTIKKYFFPKE VM
Sequences:
>Translated_402_residues MEKVFRDSIHGDIFIHDEIFMEIINSPEMQRLRRILQLGGAQFAYAGATHTRFTHCLGVYHIISQFLKAPDFEKISAKEK KIVLLAGLMHDIGHGPFSHTFEKISNRSHEEYSADIIRNPEGNISKILKKHKVDPEDIIAILEGKYPNKVLNSLVSSQLD ADRIDYLMRDSYYCGVNYSSLDTEFLIRNVRIMDDKIVFPKKTIHAIESYLLGRYHMYKQVYEHKISTAFDVTLIS*FER IIDLNEKGYKFLDDRINNYFSYIFNGQNIPIHLYLILDDFTMFDIMKSCQKENDHILNDLSDRLINRNFLKLKEADEFKI REIKTLLKEEGKDPKYYFIEPKVKKPSIYKDGVTDGKDQTIYIVDKNNVVKSLTKFSLLANTVKLIEDEKTIKKYFFPKE VM >Mature_402_residues MEKVFRDSIHGDIFIHDEIFMEIINSPEMQRLRRILQLGGAQFAYAGATHTRFTHCLGVYHIISQFLKAPDFEKISAKEK KIVLLAGLMHDIGHGPFSHTFEKISNRSHEEYSADIIRNPEGNISKILKKHKVDPEDIIAILEGKYPNKVLNSLVSSQLD ADRIDYLMRDSYYCGVNYSSLDTEFLIRNVRIMDDKIVFPKKTIHAIESYLLGRYHMYKQVYEHKISTAFDVTLIS*FER IIDLNEKGYKFLDDRINNYFSYIFNGQNIPIHLYLILDDFTMFDIMKSCQKENDHILNDLSDRLINRNFLKLKEADEFKI REIKTLLKEEGKDPKYYFIEPKVKKPSIYKDGVTDGKDQTIYIVDKNNVVKSLTKFSLLANTVKLIEDEKTIKKYFFPKE VM
Specific function: Unknown
COG id: COG1078
COG function: function code R; HD superfamily phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Homo sapiens, GI38016914, Length=277, Percent_Identity=29.9638989169675, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17537827, Length=285, Percent_Identity=25.9649122807018, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17537829, Length=285, Percent_Identity=25.9649122807018, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI221512937, Length=270, Percent_Identity=28.5185185185185, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24666702, Length=291, Percent_Identity=28.1786941580756, Blast_Score=77, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46968; Mature: 46968
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKVFRDSIHGDIFIHDEIFMEIINSPEMQRLRRILQLGGAQFAYAGATHTRFTHCLGVY CCCHHHHCCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHH HIISQFLKAPDFEKISAKEKKIVLLAGLMHDIGHGPFSHTFEKISNRSHEEYSADIIRNP HHHHHHHCCCCCHHHCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCC EGNISKILKKHKVDPEDIIAILEGKYPNKVLNSLVSSQLDADRIDYLMRDSYYCGVNYSS CCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCC LDTEFLIRNVRIMDDKIVFPKKTIHAIESYLLGRYHMYKQVYEHKISTAFDVTLISFERI CCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDLNEKGYKFLDDRINNYFSYIFNGQNIPIHLYLILDDFTMFDIMKSCQKENDHILNDLS HCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCHHHHHHH DRLINRNFLKLKEADEFKIREIKTLLKEEGKDPKYYFIEPKVKKPSIYKDGVTDGKDQTI HHHHCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEE YIVDKNNVVKSLTKFSLLANTVKLIEDEKTIKKYFFPKEVM EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEKVFRDSIHGDIFIHDEIFMEIINSPEMQRLRRILQLGGAQFAYAGATHTRFTHCLGVY CCCHHHHCCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHH HIISQFLKAPDFEKISAKEKKIVLLAGLMHDIGHGPFSHTFEKISNRSHEEYSADIIRNP HHHHHHHCCCCCHHHCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCC EGNISKILKKHKVDPEDIIAILEGKYPNKVLNSLVSSQLDADRIDYLMRDSYYCGVNYSS CCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCC LDTEFLIRNVRIMDDKIVFPKKTIHAIESYLLGRYHMYKQVYEHKISTAFDVTLISFERI CCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDLNEKGYKFLDDRINNYFSYIFNGQNIPIHLYLILDDFTMFDIMKSCQKENDHILNDLS HCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCHHHHHHH DRLINRNFLKLKEADEFKIREIKTLLKEEGKDPKYYFIEPKVKKPSIYKDGVTDGKDQTI HHHHCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEE YIVDKNNVVKSLTKFSLLANTVKLIEDEKTIKKYFFPKEVM EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 7934828 [H]