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The map label for this gene is rsmI [H]

Identifier: 50364918

GI number: 50364918

Start: 129812

End: 130684

Strand: Direct

Name: rsmI [H]

Synonym: Mfl103

Alternate gene names: 50364918

Gene position: 129812-130684 (Clockwise)

Preceding gene: 50364917

Following gene: 50364920

Centisome position: 16.37

GC content: 25.43

Gene sequence:

>873_bases
ATGAGAAATCAATCAACATTTAAAAATGATAAACCTACAATATATTTAGTTGGTACACCAATTGGTAATTTAGAAGATAT
AAGTTTTAGAGCATTAGAAACACTTAAAAAAGTTTCAGTTATTTGTTGTGAAGACACCAGAACAAGTCAAACATTTTTAA
AAAAATATGAGATTAATAAAAAACTTATTTCTCTTCATAAATATAATGAATCTGAAAGGATTGAAGAAATAATAAAAATT
TTAGATGATAAAAATGATGTAGCTATAATTAGTGATGCTGGTTGCCCAGCTATAAGTGATCCGGGCGCAAACTTTATTAA
AGAAATTTTAAATATTTATGATTGTAATGTTACAAGCGTTAATGTTGGTCCTGCGTATATCCACGCAATTGTGGCAAGTG
GATACACAGCTAAAGAAAACTATTTTCATGGCTTTTTAGAAAATAAAAGTGATAAATCTAAAGTTGATGAACTTAAAGAT
ATGTTAAACAAAAATTCAAAGTCAATAATAAGTTTTTATGAATCAGTTCATAGAATTAAAGATACAATTTCAAAAATGAG
TGAAATTTTAAATTCAAATCAAAGTGTTTTAATAGGTAGAGAACTTACAAAACTAAATGAACAATATATCCAAGGAGAAA
TTGAAGTTGTTAATAATTTTGTACAAAGCGAAGAATTTATTTTAAAAGGTGAAATTGTCATTGTAGTAGATACTCAAAAA
CAACAAGTAGATGCAATTAATGATAATGAAATAATTTTGCTTGTTGAAGAAGAAATAAAACAAGGTTATAAGTTGAAACA
AGCTTGTGATATCGTTGGTGCAAAGATTAATAAATCTAAAAATGAGGTTTATCAAATATTTATTAAAAAGTAG

Upstream 100 bases:

>100_bases
AATCAGTTGAAGTTAAAGATATCAATGCGCCTTACTCAATTGAAATCAAAGAAGTTAATTAATAATTACCCTTTTGGGTA
ATTTTATTTTAAGGAGAGTT

Downstream 100 bases:

>100_bases
ATTTTCAATTGACAAATCAATGTAATTTTAAGATAATAAAAACGTTATCTTTTATGGCGCCGGTGGTGAAGTGGTTAACA
CATCAGGTTGTGGCTCTGAC

Product: putative tetrapyrrole methylase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MRNQSTFKNDKPTIYLVGTPIGNLEDISFRALETLKKVSVICCEDTRTSQTFLKKYEINKKLISLHKYNESERIEEIIKI
LDDKNDVAIISDAGCPAISDPGANFIKEILNIYDCNVTSVNVGPAYIHAIVASGYTAKENYFHGFLENKSDKSKVDELKD
MLNKNSKSIISFYESVHRIKDTISKMSEILNSNQSVLIGRELTKLNEQYIQGEIEVVNNFVQSEEFILKGEIVIVVDTQK
QQVDAINDNEIILLVEEEIKQGYKLKQACDIVGAKINKSKNEVYQIFIKK

Sequences:

>Translated_290_residues
MRNQSTFKNDKPTIYLVGTPIGNLEDISFRALETLKKVSVICCEDTRTSQTFLKKYEINKKLISLHKYNESERIEEIIKI
LDDKNDVAIISDAGCPAISDPGANFIKEILNIYDCNVTSVNVGPAYIHAIVASGYTAKENYFHGFLENKSDKSKVDELKD
MLNKNSKSIISFYESVHRIKDTISKMSEILNSNQSVLIGRELTKLNEQYIQGEIEVVNNFVQSEEFILKGEIVIVVDTQK
QQVDAINDNEIILLVEEEIKQGYKLKQACDIVGAKINKSKNEVYQIFIKK
>Mature_290_residues
MRNQSTFKNDKPTIYLVGTPIGNLEDISFRALETLKKVSVICCEDTRTSQTFLKKYEINKKLISLHKYNESERIEEIIKI
LDDKNDVAIISDAGCPAISDPGANFIKEILNIYDCNVTSVNVGPAYIHAIVASGYTAKENYFHGFLENKSDKSKVDELKD
MLNKNSKSIISFYESVHRIKDTISKMSEILNSNQSVLIGRELTKLNEQYIQGEIEVVNNFVQSEEFILKGEIVIVVDTQK
QQVDAINDNEIILLVEEEIKQGYKLKQACDIVGAKINKSKNEVYQIFIKK

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=297, Percent_Identity=31.986531986532, Blast_Score=154, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32941; Mature: 32941

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNQSTFKNDKPTIYLVGTPIGNLEDISFRALETLKKVSVICCEDTRTSQTFLKKYEINK
CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHH
KLISLHKYNESERIEEIIKILDDKNDVAIISDAGCPAISDPGANFIKEILNIYDCNVTSV
HHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEE
NVGPAYIHAIVASGYTAKENYFHGFLENKSDKSKVDELKDMLNKNSKSIISFYESVHRIK
ECCHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
DTISKMSEILNSNQSVLIGRELTKLNEQYIQGEIEVVNNFVQSEEFILKGEIVIVVDTQK
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCH
QQVDAINDNEIILLVEEEIKQGYKLKQACDIVGAKINKSKNEVYQIFIKK
HHHCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECC
>Mature Secondary Structure
MRNQSTFKNDKPTIYLVGTPIGNLEDISFRALETLKKVSVICCEDTRTSQTFLKKYEINK
CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHH
KLISLHKYNESERIEEIIKILDDKNDVAIISDAGCPAISDPGANFIKEILNIYDCNVTSV
HHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEE
NVGPAYIHAIVASGYTAKENYFHGFLENKSDKSKVDELKDMLNKNSKSIISFYESVHRIK
ECCHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
DTISKMSEILNSNQSVLIGRELTKLNEQYIQGEIEVVNNFVQSEEFILKGEIVIVVDTQK
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCH
QQVDAINDNEIILLVEEEIKQGYKLKQACDIVGAKINKSKNEVYQIFIKK
HHHCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]