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The map label for this gene is rpiB [H]

Identifier: 50364920

GI number: 50364920

Start: 131227

End: 131667

Strand: Direct

Name: rpiB [H]

Synonym: Mfl105

Alternate gene names: 50364920

Gene position: 131227-131667 (Clockwise)

Preceding gene: 50364918

Following gene: 50364921

Centisome position: 16.54

GC content: 30.39

Gene sequence:

>441_bases
ATGAATAAGATATATATAGCAAACGATCATACAGCGATTGAAATGAAAAACGCTATTAAAAATCATTTAGAGAAAAAAGG
TTATGAAGTTATTGATTTAGGTAACAATGATGGTAATTCATGTAACTATGCAAATATTGGAATTACTTTAGCAGAAGCTG
TTGTTGCGGATGAAAATAATAAAGGTATTGCTTTATGTGGTACAGGAATTGGAATAAGCATTGCAGCAAATAAAGTTAAA
GGTGCTAGAGCTGGACTTGTGTATGAAGTTCAAACTGCTGAATTAACAAGACAACATAATAATGCAAATATATTAGCTAC
TGGTGCTAGATTAATTGCTGTTGATAAAGCACTTTTATTAGTAGACACTTTCTTAAATACTGAATTTGAAGGTGGAAGAC
ATCAAGAAAGAGTAGGAACATTAGATGAGTACAATAAATAA

Upstream 100 bases:

>100_bases
ATTTTTACTTATTTCATAATTATTCATAATTCAATCCTTTTTATATAAATATTATCTCACTAATAAGTTAAAATTATTAA
AAGATTAATGTGGGGGTTTT

Downstream 100 bases:

>100_bases
AAATATTTTAGAATCACTTAAAGGTGAATTAAAAAGACAACAAGATCACATTGAATTAATAGCAAGTGAAAACTATGTTA
GTGATGCAGTTTTACAATTA

Product: ribose 5-phosphate isomerase

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNKIYIANDHTAIEMKNAIKNHLEKKGYEVIDLGNNDGNSCNYANIGITLAEAVVADENNKGIALCGTGIGISIAANKVK
GARAGLVYEVQTAELTRQHNNANILATGARLIAVDKALLLVDTFLNTEFEGGRHQERVGTLDEYNK

Sequences:

>Translated_146_residues
MNKIYIANDHTAIEMKNAIKNHLEKKGYEVIDLGNNDGNSCNYANIGITLAEAVVADENNKGIALCGTGIGISIAANKVK
GARAGLVYEVQTAELTRQHNNANILATGARLIAVDKALLLVDTFLNTEFEGGRHQERVGTLDEYNK
>Mature_146_residues
MNKIYIANDHTAIEMKNAIKNHLEKKGYEVIDLGNNDGNSCNYANIGITLAEAVVADENNKGIALCGTGIGISIAANKVK
GARAGLVYEVQTAELTRQHNNANILATGARLIAVDKALLLVDTFLNTEFEGGRHQERVGTLDEYNK

Specific function: In Addition To Its Activity On D-Ribose 5-Phosphate It Probably Also Has Activity On D-Allose 6-Phosphate. [C]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=138, Percent_Identity=44.2028985507246, Blast_Score=125, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 15755; Mature: 15755

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIYIANDHTAIEMKNAIKNHLEKKGYEVIDLGNNDGNSCNYANIGITLAEAVVADENN
CCEEEEECCCCEEHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCEEEEEEEEECCCC
KGIALCGTGIGISIAANKVKGARAGLVYEVQTAELTRQHNNANILATGARLIAVDKALLL
CEEEEEECCCEEEEEECCCCCCCCCEEEEEEHHHHHHCCCCCEEEEECEEEEEHHHHHHH
VDTFLNTEFEGGRHQERVGTLDEYNK
HHHHHCCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MNKIYIANDHTAIEMKNAIKNHLEKKGYEVIDLGNNDGNSCNYANIGITLAEAVVADENN
CCEEEEECCCCEEHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEECCEEEEEEEEECCCC
KGIALCGTGIGISIAANKVKGARAGLVYEVQTAELTRQHNNANILATGARLIAVDKALLL
CEEEEEECCCEEEEEECCCCCCCCCEEEEEEHHHHHHCCCCCEEEEECEEEEEHHHHHHH
VDTFLNTEFEGGRHQERVGTLDEYNK
HHHHHCCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8604303; 8948633 [H]