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The map label for this gene is ygiW [C]

Identifier: 50085345

GI number: 50085345

Start: 2210716

End: 2211096

Strand: Reverse

Name: ygiW [C]

Synonym: ACIAD2240

Alternate gene names: 50085345

Gene position: 2211096-2210716 (Counterclockwise)

Preceding gene: 50085346

Following gene: 50085344

Centisome position: 61.44

GC content: 38.32

Gene sequence:

>381_bases
ATGTTCGATCAGAGAGGAACAGCAATGAGACGTCTAGCAGCTTTAGTTTTGACATCAGGTTTGACTATTACGGGTCTCAG
CTATGCTCAGCCAGTCAATCAATCTGCACTTATTCCAACAACAAGTGTGAGTGTGAAAGATGCATTAACATTCAAAGATA
ATACGCCTGTAAAACTTCAAGGTCAGGTGGTTAAGTCCTTGGGTGATGAGAAATATCAATTTCGCGATAAAACAGGTGTT
ATTACTGTAGATATTGATGATGAACTTTGGCAAGGACGTCCAGTTTCACCAACAACATACATTACTTTAATAGGTGAAGT
AGATATCGACTACAAACCAATGAAGCGTGTTGAAATTGAAGCCGATCAAATACAATTCTAA

Upstream 100 bases:

>100_bases
GAAGAAGTCTTAAGGGTGGTCCCATTAACTTAGTAAAAGGTTAGTTTAGATCTTAAGATTCACCTCATGTGTTTTTGTTG
TAATTCTCTTATCAAATACA

Downstream 100 bases:

>100_bases
ACTATGTTGAACTGAATCAGTCTTGTAGCCTATCACCGTATATCCTGAAAAGGATATACGGTGAATTTTTTAGAATATTG
ATATAACCGCCAGAGAGTAA

Product: signal peptide

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MFDQRGTAMRRLAALVLTSGLTITGLSYAQPVNQSALIPTTSVSVKDALTFKDNTPVKLQGQVVKSLGDEKYQFRDKTGV
ITVDIDDELWQGRPVSPTTYITLIGEVDIDYKPMKRVEIEADQIQF

Sequences:

>Translated_126_residues
MFDQRGTAMRRLAALVLTSGLTITGLSYAQPVNQSALIPTTSVSVKDALTFKDNTPVKLQGQVVKSLGDEKYQFRDKTGV
ITVDIDDELWQGRPVSPTTYITLIGEVDIDYKPMKRVEIEADQIQF
>Mature_126_residues
MFDQRGTAMRRLAALVLTSGLTITGLSYAQPVNQSALIPTTSVSVKDALTFKDNTPVKLQGQVVKSLGDEKYQFRDKTGV
ITVDIDDELWQGRPVSPTTYITLIGEVDIDYKPMKRVEIEADQIQF

Specific function: Unknown

COG id: COG3111

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789401, Length=129, Percent_Identity=32.5581395348837, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14008; Mature: 14008

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00512 ALPHA_GALACTOSIDASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDQRGTAMRRLAALVLTSGLTITGLSYAQPVNQSALIPTTSVSVKDALTFKDNTPVKLQ
CCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEH
GQVVKSLGDEKYQFRDKTGVITVDIDDELWQGRPVSPTTYITLIGEVDIDYKPMKRVEIE
HHHHHHCCCCCEEEECCCCEEEEEECHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEEEC
ADQIQF
CCEECC
>Mature Secondary Structure
MFDQRGTAMRRLAALVLTSGLTITGLSYAQPVNQSALIPTTSVSVKDALTFKDNTPVKLQ
CCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEH
GQVVKSLGDEKYQFRDKTGVITVDIDDELWQGRPVSPTTYITLIGEVDIDYKPMKRVEIE
HHHHHHCCCCCEEEECCCCEEEEEECHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEEEC
ADQIQF
CCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA